Takifugu rubripes (torafugu): 101072797
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Entry
101072797 CDS
T02386
Symbol
dhx15
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101072797 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101072797 (dhx15)
03009 Ribosome biogenesis [BR:
tru03009
]
101072797 (dhx15)
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101072797 (dhx15)
Spliceosome [BR:
tru03041
]
Complex A
U2 snRNP components
U2 related factors
101072797 (dhx15)
Complex B
101072797 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
101072797 (dhx15)
Ribosome biogenesis [BR:
tru03009
]
Eukaryotic type
90S particles
Helicases
101072797 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_19
AAA_25
SRP54
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
101072797
NCBI-ProteinID:
XP_029707248
Ensembl:
ENSTRUG00000013990
LinkDB
All DBs
Position
17:complement(1611455..1617046)
Genome browser
AA seq
771 aa
AA seq
DB search
MSKRHRLDLGDDYSSKKRSDGRDRDRDRDRDREDRSRDRDRDRDRDRDRDRGPRPDRDRD
TKPPSVPANSTPIIPIMPALKQMAVHQQMNPFTNLPHTPRYYEILKKRLQLPVWEYKESF
SDIITRHQTFVLVGETGSGKTTQIPQWCVDMVRGLPGPKRAVACTQPRRVAAMSVAQRVA
DEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERT
LATDILRECXRRWSRQRSDLKIIVMECDTRRREIQIYFDNCPLLTIPGRTHPVEIFYTPE
PERDYLEAAIRTVIQIHMCEEEEGDVLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII
PLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV
YNPRIRVESLLVTAISKASAQQRXGRAGRTRPGSVSGFIRKKAYKTEMQDNTYPEILRSN
LGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFP
LDPQLAKMVIASCEFNCSNEILSITAMLSGNSPQCFVRPTEAKKAADEAKMRFAHIDGDH
LTLLNVYHAFKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRD
YYINIRKALCTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVALQRIRSHHQ
NYIRTCTDIKPEWLVKIAAQYYDMSNFPQCEAKRQLERIISKLESKEYSQY
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaggcatcgtttagatttgggcgatgactactccagtaagaagaggtctgat
gggcgtgacagagacagagaccgggacagagaccgcgaggaccgctccagagacagggac
cgagatcgggacagagacagggatcgggacaggggaccgagaccggacagagaccgagac
acaaagccgcctagtgtcccagccaacagcacaccgatcatcccaattatgcctgctctc
aagcagatggctgtgcaccagcagatgaacccgttcaccaacctaccacacacaccgcga
tactacgagatcctgaagaaacggttgcagcttcccgtctgggaatacaaggagagcttc
agtgacatcatcacacgccatcagacgtttgtcctcgttggagaaactggatctgggaag
acgacacagatcccgcagtggtgtgtggacatggtgaggggtttgccgggtccaaagcgc
gctgtagcgtgtacccagcccaggagagtcgcggctatgagcgtggcgcaaagggtggcg
gacgaaatggatgtcatgcttggacaagaggtcggttactccattcggtttgaggactgt
agctccgctaagacaattctcaagtacatgacagacggtatgttactgagagaagctatg
aacgacccactgttggaaagatacggggtcataatcctggacgaggcccacgagcgaact
ctggctacagatatcctgagggagtgctgaaggaggtggtcccgtcaaagatccgatctc
aagatcatcgtcatggagtgcgacactagacgccgggaaattcagatttacttcgacaac
tgtcccctcctgaccatccccggtcgcacgcaccccgtcgagatcttctacacccccgaa
ccggagagagactaccttgaggcagccatacgtacggtcatacagatccacatgtgcgag
gaagaagaaggtgacgtcctcctctttctcaccggacaggaggaaatcgacgaggcctgc
aaacggatcaaacgggaagtggatgaccttggacccgaagtgggagacattaaaatcatt
cctttgtattccacactgccgccacagcagcagcaaaggattttcgagccgccacctccg
cggaaacccaacggcgccataggaaggaaggtcgtggtttcaacaaacatcgccgagacc
tccctgaccatcgacggcgtggtgtttgtcatcgatcccggattcgccaaacagaaagtt
tataatccgcgtatccgtgtggagtcgctgctggtcaccgccatcagtaaggcctccgcc
cagcagaggncaggtcgagccggcaggacgcgtccaggaagtgtttccggctttatacgg
aagaaagcttacaaaaccgagatgcaggacaacacgtaccccgaaatccttcggtccaac
ttggggtcggttgtgctgcagctgaagaagctgggcatcgacgaccttgtgcactttgac
ttcatggatccaccagctcccgagactctgatgagagccttggagctgttgaactacctg
gcggcgctcaatgacgacggcgacctgacggagctgggctccatgatggcagagttcccc
ctggacccacagctagcaaaaatggtcattgccagctgcgagttcaactgctctaatgag
attctttccattactgccatgctgtcaggtaattccccacagtgttttgtccgccccacg
gaggctaagaaggcggcagatgaggccaagatgaggtttgcccacatcgatggagaccat
ttgacgctgctcaacgtctatcatgccttcaagcaaaaccacgagtcgaaccagtggtgc
tatgacaactttgttaactatcgatcgctaatgtccgcggacaacgtgcggcagcagctg
tccaggatcatggaccgcttcaacctgccccgccggagcacagaattcaccagcagagac
tactacatcaacatccgcaaggcgctctgcaccggcttcttcatgcaggtggctcatctg
gagcgcacgggtcattacctgactgtaaaagacaaccaagtggtccagctgcacccgtct
acagtcctggaccacaaaccggagtgggttgctctacaacgaattcgttctcaccaccaa
aactacattcgcacttgtacagacatcaagccagagtggctggtgaagatcgccgcccag
tactacgacatgagcaacttcccgcagtgtgaagctaaacgacagctggagcggatcata
tccaaactagagagcaaagagtattcccagtactga
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