Takifugu rubripes (torafugu): 101072922
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Entry
101072922 CDS
T02386
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101072922
Transcription factors [BR:
tru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101072922
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
101072922
NCBI-ProteinID:
XP_003966748
UniProt:
H2SJJ3
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All DBs
Position
8:10572467..10575460
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AA seq
300 aa
AA seq
DB search
MYSMMEHEMKPSGQPPPQTPHRMSPVVTGSVDNGGGSLPSPKGAYAQGDPMDKVKRPMNA
FMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLNDAEKRPFIDEAKRLRAVHMKEYPD
YKYKPRRKTKPLLKKDPQVAKYPLSTGNLLAVAQGQSGSPRMESYGWSPSGGYPGMQGDT
LGYSQQLHRYDLSPLQYPSKMSAAQPYMNGANSYSPMSYGSSPQQPPPVTMSMVKAEPVS
QSPPTGTLNHHRGPLQGDLRDMISMYIPGPGGEAADPAAAQRGYTSVQQHYLGTVPLTHM
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagatgaagccgagcggccagccccctcctcagacccct
caccgaatgtccccggtggtgaccgggagcgtggataacggcggcggctctctgccgagc
cccaaaggcgcgtacgcgcagggcgaccccatggataaagtcaagcgacccatgaacgcg
ttcatggtgtggtccaggggccagcggcgtaagatggcccaggagaaccccaaaatgcac
aactcggagatcagcaagcgcctgggagccgagtggaaactactgaacgacgcggagaag
cggcccttcatcgacgaggcaaagcgcctccgggcggtgcacatgaaggagtaccccgac
tacaaatacaagccccgccgcaagaccaagcccctgctcaaaaaggacccccaggtggcc
aaataccccctgtccaccgggaacttgctggcggtagcgcagggccagagcgggagcccg
aggatggagagttacggctggagccccagcggggggtatcccggcatgcaaggcgacaca
ctggggtacagccagcagctgcaccggtacgacctgtcacccctccagtacccgagcaag
atgagtgcagctcagccctacatgaacggagccaactcctacagccccatgtcgtacggc
agcagccctcagcagcccccccctgtcaccatgtccatggtgaaagcggaaccagtatcc
cagtccccccccacaggcaccctgaaccaccaccgtgggcctctgcagggtgacctcagg
gacatgatcagcatgtacatcccaggacctggaggggaggccgccgaccccgcggcggcc
cagaggggctacaccagcgtccagcagcactacctgggcaccgtccctctcactcacatg
tag
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