Takifugu rubripes (torafugu): 101073063
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Entry
101073063 CDS
T02386
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03420
Nucleotide excision repair
tru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101073063 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
101073063 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tru03051
]
101073063 (rad23b)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101073063 (rad23b)
Proteasome [BR:
tru03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
101073063 (rad23b)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
101073063 (rad23b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
UBA_Ucp12
Rad60-SLD_2
Dsc3_N
OTU1_UBXL
FTCD_C
UBA_9
Motif
Other DBs
NCBI-GeneID:
101073063
NCBI-ProteinID:
XP_003965248
UniProt:
H2TF55
LinkDB
All DBs
Position
6:5211609..5214637
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AA seq
384 aa
AA seq
DB search
MLITLKTLQQQTFKIEIDEEETVKTLKERIEAEKGKDNFPVSGLKLIYAGVILNDVKPLK
EYNISDKNFVVVMATKPKTAPAATQPSPAASGPCTAAPPAPGACSTVSEVPTQQTTKEDN
AEEKPPSTAAPASTPEGGGSEVPTNANLIDEAVSNLVTGPSYESMVNEIMLMGYDREQVV
VALRASFNNPDRAVEYLLTGIPGRDQGQAAGTTAEATSAGVAPAAPLGGLRAPTGTGSST
GAERVNPLSFLRNQPQFQQMRQLIQQNASLLPALLQEIGRENPELLQEISRHQEQFIQML
NEPNPEPVPGGGGGAAATAAGMAGTASGENPMRYIHVTAQEKESIERLKELGFPEGLVIQ
AFFACEKNENMAANFLLQQNFDDE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctgataactttgaaaaccttacagcagcagacctttaaaatcgagatcgatgaggag
gagacggtgaagacattaaaggagaggattgaagcagagaaaggaaaggataatttccca
gtgtctggactgaaactgatatatgctggagtaatcctcaacgatgtcaaacccctcaaa
gaatacaatatcagtgacaagaattttgtggttgtcatggcaacaaagcctaaaacggca
ccagcggccacacagccctcgcctgctgcttcaggtccttgcacggcagcccccccggcc
cccggagcctgctcgaccgtttcagaggtccccacacagcaaaccaccaaagaagacaat
gcagaagagaaaccgccttcgaccgctgccccggcgtccacccctgagggtggaggatct
gaggtgccaacaaatgcaaacctgattgatgaggccgtttcaaatctggtgacgggcccg
tcgtacgaaagcatggtgaacgagatcatgctcatgggctacgacagagagcaggtggtg
gtggcgttgagagcgagcttcaacaaccccgacagagctgtggagtacctgctgaccggt
attccaggtagagaccagggccaggctgcaggaaccactgcagaggcaacctcagcaggc
gtggctcctgctgcacccttgggtgggctcagagcgcccacgggcaccggctcttccaca
ggcgcagaaagagtcaaccccctgagtttcttaaggaatcagccacagtttcaacaaatg
cgccagcttatccagcagaacgcttcattacttcctgctctgctgcaggagattggcagg
gaaaacccggagctgctgcaggagattagccggcaccaggaacagttcatccagatgctg
aacgaacccaatccggagccagtgccagggggaggcggtggagctgcggcaacagcagca
ggaatggcaggcaccgcttctggagagaacccaatgagatacatccatgtgacagcacag
gagaaggaatccatcgaaaggctaaaagaactgggctttccagagggactcgttatccaa
gccttcttcgcctgtgagaagaacgagaacatggccgccaacttccttttacaacagaac
tttgatgatgagtaa
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