Takifugu rubripes (torafugu): 101073103
Help
Entry
101073103 CDS
T02386
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101073103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tru04990
]
101073103
Domain-containing proteins not elsewhere classified [BR:
tru04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
101073103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_spondin
TSP1_CCN
PLAC
Motif
Other DBs
NCBI-GeneID:
101073103
NCBI-ProteinID:
XP_029706753
LinkDB
All DBs
Position
17:complement(6256747..6261332)
Genome browser
AA seq
653 aa
AA seq
DB search
MVRMWRQLSSLQQGRSLFLLHFILYLPTGAQTGDKEANSSPPEQVQVVRGNFSHLFLRIG
YHKISEIPAGARNIHIQETKKSRNYLGGYTRTRTRARARARTHTHTPKSDFFLNPKLLPP
ALVTKTGASIINGNWVIDRPGMFLAAGTQLMYLRPNEIRSRRGESITAPGPLTEDMHLYL
IYQQPGVSVYYEYKVPVHNTHSTPEPAIPTDRPSQSEEVHHEDNNDIIKEGRPTLGPSKS
RPTYTWTRSSQIECSASCGTGRRHILWKCVEKDFQATVPADLCDSALKPPDEEEDCDNRP
CPAYWDLGEWSECSKRCGPGFQHRQVICRQVIRVHTNGTETSVTVATELCGSSDRPVTRS
MCQLKICSQWEVRSEWSPCSVPCGVGQRRREVVCVSNQGDVETDEECNTNLKPESQQNCD
MGVCARSWFTSLWSPRCSAECGQGNRTRVAICLTNHMTHLPLDSCEGERPPEVTLCDSGP
CQNRLEWYAGPWGQCSAECGNGTQTRSLACISSTSGRMEVVDGLKCSSVSRPMAVQLCML
KPCGVQWFVTDWSACSRSCDGGYRVREVRCLSDNVAPSDRCDPSLTPESREECNKQPCIA
EINSDCSDQYYNCVVVLQAQLCIYPYYSNICCASCYRAQRTYLSSAQKNRTGR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggttcggatgtggcggcagctcagctccctgcaacagggccgatctctgttcctctta
cactttatcctctacctgcctacaggtgcacaaactggggataaagaagccaacagctcc
cctccagagcaggttcaggtggtaagagggaacttttctcaccttttcctacgtattgga
taccataagatttctgagattcctgctggagctcgcaacatccacatacaggagacaaaa
aagagccggaattacctgggtgggtacacacgcacacgcacacgcgcgcgcgcgcgcgcg
cgcacacacacacacacaccaaagagtgatttttttctgaatcctaaacttctccctcca
gctctggtgactaaaactggggcgtccatcatcaatggaaactgggtgattgacaggcca
ggaatgttcttagctgcaggaacacagcttatgtatctacgacccaatgaaatccgctct
cgtagaggagagtccatcactgcccctgggccgctgactgaagacatgcatctatatctg
atctaccagcagccaggggtcagtgtttactatgaatacaaggttcccgtgcacaacaca
cactccacccctgaaccagctattccaactgataggccgtcacagagtgaagaggtccac
catgaagacaataatgacatcatcaaggaaggaagacccaccctgggtccatctaaaagt
cgccccacctacacctggaccaggagcagccaaatagagtgcagtgcttcctgcggcact
ggcaggcgtcatatcctctggaagtgtgttgagaaagatttccaggcaacggttccagct
gacctttgtgactctgcgcttaagccaccagatgaggaggaagactgcgacaaccggccg
tgtcctgcatattgggacctcggggagtggtcagagtgcagcaagaggtgtggacctggc
tttcagcaccgccaggtcatctgccgccaggtcatccgtgttcacaccaatgggacagag
acttccgtcactgtggcaacagagctgtgcggttcgtctgacagacctgtgaccagatca
atgtgtcagctgaagatttgcagccagtgggaagtccgatcggagtggagcccatgttcg
gtaccgtgtggtgttggccagcgtcgcagagaggtggtgtgtgtgagcaaccagggtgac
gttgagacggatgaagagtgtaacacaaacctgaagccggaatcacagcagaactgtgat
atgggagtgtgtgcacggagctggttcacctccctctggagcccacggtgttctgctgag
tgcggccaaggaaatcgaactcgggtggcaatatgcttgacaaatcacatgacccaccta
cccctggacagctgtgaaggagaacggcccccagaggtgactctgtgtgactcgggcccc
tgccagaaccgtctggagtggtacgctggcccgtggggacagtgctctgcagagtgtggg
aatggcacacagaccaggagcctggcctgtatttccagtaccagtggacgtatggaggtt
gtggacgggttaaaatgttccagcgtctctcggccgatggcagtgcagctgtgcatgctg
aaaccctgtggtgtgcagtggtttgtcacagactggagtgcatgttcgcgctcgtgtgac
ggtggctaccgcgtacgcgaggtgcgttgcctaagtgacaatgttgctcccagtgaccgt
tgtgaccccagtttgaccccagagagccgagaagaatgcaacaagcagccgtgcatagct
gagataaactcagactgcagtgaccagtattataactgcgtggtggtgcttcaagcccag
ctctgcatttacccctactactccaacatctgctgcgcctcttgttaccgtgctcagaga
acatacctcagctctgctcagaagaaccgcaccggtcggtga
DBGET
integrated database retrieval system
