Takifugu rubripes (torafugu): 101073803
Help
Entry
101073803 CDS
T02386
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101073803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101073803
03021 Transcription machinery [BR:
tru03021
]
101073803
03036 Chromosome and associated proteins [BR:
tru03036
]
101073803
Transcription factors [BR:
tru03000
]
Eukaryotic type
Helix-turn-helix
ARID
101073803
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101073803
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101073803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
101073803
NCBI-ProteinID:
XP_029681884
Ensembl:
ENSTRUG00000011231
LinkDB
All DBs
Position
2:complement(10869674..10993633)
Genome browser
AA seq
2309 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSSSLGPELSSGKSGGGGGGGGSVQRTGPMLSAGDGTLNNVD
HHRRSELNMVHSTSATHSAPDGRDKDGNNLTAAPASTNSTTSSMETGLIANHKLKCAGSG
DPPQSQPSPQQPQPSQFGQFAPQQQQQQAPPQQQAQQRQLQSTNATSNNGQGPCGDRGMD
HQHHGGKENLLGGQGEPQQQHVSGKGEGDLTCKPAERMMGARYDHSNLGPTSNNSEFNNN
YYTPRPCYDQHGGQQQQGGGMGITHSSAHNSMENSHESGYHNSQYNQYPAYRAGYGGGAY
GMMGPSGCRQPGNMMMGSNSSNLSKSALGPPSGGFQRFPGQSGHQQHPSGATPTLNQLLT
SPSPMLRGYSAAYQDYSGTATQQQASMGLGKDAGPHFGASSAHGWGGQQRNHPHSMSPGN
GGQGLGRAQVSSMDFIAMKRSQLYGLANNPYSSPQQPGGGPYPPSQPYTSPPQHRYPMSM
QGRSQMTMGGMQYPQQQVAPYGQQGMGGYSQQTGQQGPPTYFSPPQQTPQGPAQSPYLQP
RPPPQQEAQQDAYTARGHGPGNSGKANVEDGVSHDRPSSLPDLSGSIDDLPTGTEAGLGS
AVSAGGSSSRSSSSSQGEQGGAGNQGQSPFSPHASPHLSSQRSGPSPSPVGSPAGSTQSQ
QSRSGSGPISPANGPAGNTSAQGAATATQNSGNGPDGAHPPIPRSPMAQERGFMSNMQRN
QAGSQFASPQSGPPVSPHHAPGGPVYPGMGPYSQSGPSGPYGPQGSQYGHQGNYHRPNYG
GTGSTSYSGSGITNNLGMNAGSPGLGQGSGQPIPVRRNHGPGSQNRGYPTMAPISPSMPH
PVGPGMGPPSLAASNRKPQELTVAANSTHSRRPPYARPSAQVGPLSPTSTHWPAAHTTHP
TMSPPPRPPHPSIPTPPSPSQIHRHGSYPGPGVSQPSTMATTVPYSQPTGNNSSDMGNGQ
APAYSMAPSGAVGASGDGTTSTDGKPKTDVKDDSGTTNEPHKPKLQDGYSSNSSGAPQQC
TSQPATPGGALPVPSPLSPSPASLSSYHGDDSDSISSPPWPPKTPSSPKTNPNSSGVSGE
RITRLFEFGMEPERRSWVERYLNFMEERGTPVTHLPTVGKKPLDLWKLYVAVREIGGLAM
VNKNKKWRELSTGLNLGTSSSSANSLKKQYIQFLFAYECKMERGEEPPADGSGGIAGGDG
RKQVKIQPPSPANSCGSLQGPQTPQSSGSSSTAEAAGDLKPPTPATTPLGQVTPLPPNRS
SVSVQDPFSEVSDPAFQKRGTPLPPSAPYQQGLTMPDMMMRMQYDTKDPFAGMRKMAGAD
PYMPGQMQGGGMQDMYGRPPSAMSMSRSQYPYGPGYDRRPDHVMGMEGSMGPPGSQNNMG
PSNSESSMYPPSRYPSQQRNDGYSQQYPSMPYGMHPSGMYPQQQHGYKRPMDSMYGPPPK
RHESDMYGMQYSNQQPDMYNHYGSGYSAPEHRPLQGQFPFPYTRDHMTPTGQSQHGMMGG
GPTPNHASDGPNMWPSRTDLGYPYPNRQSQMPLYGSVGREDMDGRPRQEQWHRQPPYMSS
SGGMCALSSRQPSSYSNSQSMGNHLPRAPSPGAFQRSMDSRMSPSKALFMSPMKMPKPRM
TMMGSQAGGPLGHFPPNLRQDLNYPPGSVECTMPNLNPRRKLNSKDTGTPEAWRVMMSLK
SGLLAESTWALDTINILLYDDSTVASFNLSQLPGFLELIVEYFRRFLIEIFGILEEFEVR
TVAQKHPSGFDPNEVEKVSPDQEYASIIPPEAALAAETPVEPAGAVGEEPSPMATQPESA
QVNGEKEEEASLKVEKEEEREGNKGEEGDRTESKTLSAEHGASKLEPKPKQASKYDKLPV
KIVQTEELIEDATERLGYITEFTTGLLHWQAGGGDSTSHIQTHFEAQGRAAARSEEKTEQ
ESKEVDDGKDAPLKHIAATIDDVLCARVDALSYAHPARSLPSYPFRVHSDGERDHITLLE
DEPRYLDEAPLCTASAWQDSLAKRCLCISNIVRNLSFIPGNDLDISRHPALVLLLGKLLL
LHHQHPERNRTPPNLQRDEQRERGLSSSKEEWWWECLSVLRENAMVTLANISGQLDLSNY
PDTICLPILNGLLHWMVCPSAEAQDPFPSAAPHSQLTPQRLVLECLCKLSILGDNVDLLL
ATPPFSRQEKLFTILVRYVGQRKAQVYREMAVAVLSHLAQGDPTAARAIAMQKSCVGNLV
GFLEDGVSMAQYQQNPHSLLHMGHPPMDPPSINMMCRAAKGLLAMAKVEENKTEFVLFEN
RLLDLSISSVLNPGVAAVICQVLFHLGKS
NT seq
6930 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaagttgcatcggctccgaccagaactaacaacaaaaataagaaattatcc
agcagtttgggtccggagctcagttcggggaaatcgggaggaggaggaggaggaggaggg
agcgttcagcggactggaccgatgctgagtgctggagatgggactctgaataatgtagac
catcaccgccgaagcgagctcaacatggttcattcaacttcagcgactcacagcgctccg
gacggacgcgacaaggatgggaataacctcacggccgcgccagcttcgactaattcaacc
acttcctcgatggagacgggtttgatcgccaaccataagctgaaatgtgcggggagcgga
gatcccccacagtctcagccgtcgccgcagcagccgcagccgtcgcaattcggccagttt
gcgccgcagcagcagcagcagcaggcgccgccgcagcagcaggcgcagcagcggcagctc
caaagtaccaacgccaccagtaacaacggccagggaccgtgcggggacagaggcatggac
catcaacaccacggtgggaaagagaacctgttgggggggcagggggagccacagcagcag
cacgtgtcaggaaaaggtgagggtgacctcacctgtaaacccgcggagaggatgatgggt
gccaggtacgaccactccaacttggggccaactagcaacaactctgagtttaacaacaac
tattacaccccgaggccttgttacgaccaacatggcggacaacagcaacaaggcggtggg
atgggtataacgcactcatcagcacataacagcatggagaactcccacgaatcagggtac
cacaacagccagtataaccagtaccctgcgtatcgggcgggctacggcggaggggcctat
gggatgatgggcccctctggatgccggcaacctgggaacatgatgatgggcagcaactcc
tcaaacctgagcaagtctgccttggggcctccttccggtggtttccagaggttcccaggc
caaagtggtcatcagcagcatccttcgggggccaccccgacccttaaccaattgctcacg
tcccccagtccgatgctgcggggttacagcgccgcgtaccaagactacagcggcaccgcg
acgcaacagcaggccagcatgggactggggaaagacgcggggccccacttcggggcctcg
tcggcccacggctgggggggtcagcagagaaatcacccgcattcaatgagcccagggaac
ggagggcaaggcctcggcagagcgcaggtatcctccatggacttcatagcgatgaagcgc
tcccagctctacggcctggccaacaatccctactcctccccgcagcagcctgggggcggg
ccttaccccccaagccagccgtacacctcgcctcctcagcacagatacccaatgagcatg
caggggaggagccaaatgaccatgggtggcatgcagtatcctcagcagcaggtggcgcct
tacggccagcaggggatgggaggttacagccagcagacgggccagcagggaccgcctacg
tacttcagtcctccgcagcagacccctcaaggcccggcccagagcccctacctgcagccc
cgcccgccgccgcagcaggaggcccagcaggacgcgtacacagcccggggtcatggccca
gggaattctgggaaggccaacgtcgaggacggtgtctcccacgaccgcccctccagtttg
ccagacctgtccggctccattgatgacctccccacagggacggaggctgggctgggctca
gctgtcagcgcgggcggatcctccagcaggagcagcagcagcagccagggggagcaaggg
ggtgccggtaaccagggacagtcgcccttctctccacacgcttcgccccatctctccagc
cagaggagcggcccgtctccctcccccgtgggatcgcctgcgggttccactcagtcacag
cagtcgcggtcaggatcggggcccatctctcctgccaacggacccgctggcaacacctcc
gcacagggtgccgctacagccacacagaactctgggaatggaccagacggagcccacccc
cccatcccccgttcgcccatggctcaggagagagggttcatgtccaacatgcagaggaac
caggccggatctcagtttgcttcgcctcagtcgggacctccagtgtctccccaccacgct
cctgggggcccagtgtatcctgggatgggtccctactcccagagcggcccgtctggccct
tacgggcctcaagggtcgcagtacgggcaccaaggtaattaccatcgacccaactacggt
gggactggcagtaccagctacagcggctccggcataaccaacaacctcggaatgaatgct
ggcagccccgggctcggtcagggatctggtcagcctattcctgtaaggcgcaaccacggt
ccaggcagccagaacagagggtacccgaccatggctcccatctcccccagcatgcctcac
ccagtcgggcccggtatgggccccccttcgttagctgcttctaaccgcaaaccccaagaa
ttaacggtcgccgccaactcaacacacagcaggcgacctccgtacgcgaggccctcagcc
caggtggggccgctcagtcctacctccacgcactggcccgcagcccacaccactcatccc
acaatgtcacctccaccccgacctccccacccatccataccgactccaccttcaccttca
caaatccatagacacgggagttatccaggaccaggcgtcagccagcccagcaccatggcg
accaccgttccctacagtcagccaacagggaacaacagctcagacatggggaacggccaa
gctccggcctacagtatggcaccgtcaggagccgtgggagcgtcaggagatgggacgacg
agcacagatgggaaaccaaaaacggatgtgaaagatgacagcggcactaccaacgaaccc
cacaaaccaaagctacaggacggctacagcagcaacagcagcggcgctccgcagcagtgt
acatcccagccagccacgccgggcggcgccctgcctgtgccctcccccctctcgcccagc
ccagccagtctgtcctcttatcacggagacgacagcgacagcatcagcagccccccttgg
ccccccaagaccccttccagtccaaaaaccaaccccaactcgtccggcgtcagtggggag
cgaatcacgcggctgttcgagtttggcatggagccagaacggcggagctgggtggaacga
tacctcaacttcatggaggagaggggcacacccgtcacccatctccccactgtgggcaag
aagccgctggacctctggaagctctacgtagccgttcgggagataggaggcctggccatg
gtcaacaagaacaagaagtggcgcgagctgtccaccggcctcaacctgggcacgtcgagc
agctccgccaactcgctcaagaagcagtacatccagtttctgttcgcttacgagtgcaag
atggagaggggagaggagccgccggcggacggcagcggcggcatcgctggaggggacggc
aggaagcaggtcaagatccaaccgccgtcgcctgctaattcctgcggctccctacaaggc
ccacagacgccacagtcctctggcagcagctccacagccgaggcggcgggggatctgaag
ccccccacccctgccaccacccctctggggcaagtcaccccactgccccccaacaggagc
agtgtgagtgtacaagaccccttctcagaggtgagcgacccggccttccagaagcgtggc
acccccctgcccccctcagcaccttatcagcagggactcactatgcctgacatgatgatg
aggatgcagtatgacaccaaagaccccttcgccgggatgaggaagatggcaggggcagat
ccttacatgccaggccagatgcaaggaggaggcatgcaggacatgtacggtcggccgcca
tcggccatgagtatgagccgctctcagtacccgtatggaccaggctatgacaggaggccc
gatcacgtcatggggatggaagggagtatggggcctcctgggagtcaaaacaacatgggt
ccctcgaacagtgagagcagcatgtacccccccagcagatacccttcacaacagagaaac
gatggttacagtcagcagtatcccagcatgccgtatgggatgcatccatctggaatgtat
ccgcagcaacagcacggctacaagcgtccaatggacagcatgtacggccccccacccaag
agacatgagagtgacatgtatggcatgcagtactccaatcaacagccagacatgtacaac
cactacggcagcggctactcggctccagaacacagacccctccagggacagttccccttt
ccctacacacgtgaccatatgacccccacgggtcagagccaacacggtatgatgggcggc
ggtcccaccccaaatcacgcgagcgacggtccaaatatgtggccgtccaggaccgacctc
ggctatccctaccccaacagacagtctcagatgccgctgtacggctccgttggtagagaa
gacatggacgggcggccgaggcaggagcagtggcaccgccagccgccctacatgtcgtca
tcaggcggcatgtgtgctctgtcttcacgtcagccgtcgtcttactccaactctcagtcc
atgggcaatcacttgcccagagcacccagcccgggggccttccagcgctccatggactcc
aggatgtcacctagcaaagcgctgttcatgtcacccatgaagatgcccaaacccaggatg
accatgatgggctcacaagccggtgggccgctcggtcattttcctcccaacctgaggcag
gacctcaactaccctccaggatcggtggagtgcaccatgccaaatctcaatcccagacga
aagctaaactccaaggacaccggaacgcctgaggcctggcgtgtgatgatgtctctgaag
tctggcctgctggcagagagcacttgggctctagacaccatcaacatcctgctgtacgat
gacagcactgtggcctccttcaacctctctcagctgcccgggttcctcgagctgatcgta
gaatacttccgacgttttctgattgagattttcggcatcctggaagagtttgaagtgagg
actgtggctcagaaacacccttcaggctttgatcctaacgaggtggagaaggtctccccg
gaccaggaatacgcgtccatcatcccgcctgaagccgcgttggcagcggagacgccggtg
gagcctgcaggagctgttggggaggagccttccccgatggccacacagccagagtcggca
caggtgaacggcgagaaggaggaggaggcgagtctcaaagtggagaaggaagaggaaaga
gaaggaaataaaggagaggagggcgacagaacagagagtaaaactttaagcgctgagcat
ggcgccagtaagctcgaaccaaaacctaaacaggccagtaaatatgataagctccccgtc
aagatcgtgcaaacagaggagctgattgaggacgcgacggagcgcttagggtatatcaca
gagttcaccacggggctgctgcactggcaggcaggcgggggagactccacttcacacatc
caaacccattttgaagcccagggccgagcagctgccaggtcggaggagaaaacggagcag
gaaagcaaagaggtggacgacgggaaggacgcgcctctgaagcacatcgccgctaccata
gacgacgttctctgtgcgcgcgtcgacgccttgtcgtacgcccaccccgcacgctccctg
ccatcctaccccttcagggtgcattcggatggcgagcgggaccacatcaccctgctggag
gacgagcctcggtacctggatgaggccccgctttgcaccgcctctgcctggcaggactcc
ctggccaagcggtgtctctgcatttccaacatcgttcgcaacctgtcttttattcccggg
aacgacttggatatttcgcgccaccctgctctggtcctcctcttgggcaagctgctcctg
ctgcaccaccagcacccggagaggaacagaacgccccccaacctccagcgggatgagcag
cgagagcgaggactgtcgagcagcaaagaggaatggtggtgggagtgtctgagcgtgcta
agggagaacgccatggtcacgctggccaacatttcgggccagctggatctctccaactat
ccggacactatctgcctccccatcctcaatggccttctccactggatggtgtgcccttca
gcggaggcccaggaccccttcccttcagcagcgccgcactcccagctcactccccagaga
cttgtgctcgagtgcctctgcaagctcagcatcctgggcgacaacgtcgaccttttgctc
gcgacgccgcctttcagccgacaggagaagctcttcaccatcttggtccgctacgttggt
cagaggaaggcccaggtgtacagagagatggccgtggccgttctctcgcacctggcacaa
ggagaccccacagctgcacgcgccatcgccatgcagaagagctgcgtggggaatttggtt
ggtttcttggaggacggcgtgagcatggcgcagtaccagcagaaccctcacagcctatta
cacatggggcatccccccatggacccacccagcataaatatgatgtgcagggcagctaaa
ggcctgttggctatggctaaagtggaggaaaacaagacagagtttgtgttattcgagaac
agattgttagacctctcaatttcatcggtgcttaacccgggagtggcggctgttatttgc
caagtcctcttccatttaggaaaatcatga
DBGET
integrated database retrieval system
