Takifugu rubripes (torafugu): 101073873
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Entry
101073873 CDS
T02386
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101073873 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101073873 (cstf3)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101073873 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
101073873
NCBI-ProteinID:
XP_003977904
Ensembl:
ENSTRUG00000004959
LinkDB
All DBs
Position
13:20860737..20869259
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AA seq
716 aa
AA seq
DB search
MTTDATADQAASEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLVIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDPRTRHHVFVSAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGNLSPE
KSGEVWARFLAFESNIGDLASILKVERRRFSAFKDEYEGKETALLVDRYKFMDLYPCSSS
ELKALGYKDVSRAKLAAMLPEAVVAPSAPTLKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPPAVVLMKLLPPPTCFTGPFVQVDELMETFRRCMLPETVDAAVELIT
GRPLDAAGEGNGPMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRSRQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacgcaaccgccgatcaggcggcatctgagtatattccagagaaggtgaaa
aaggcagagaagaagttggaagaaaatccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacatatgagcgccttgtcaca
cagttcccaagctctggcagattctggaaacttttcattgaagctgagatcaaggctaaa
aactatgacaaagtagaaaagttgtttcagaggtgtctcatgaaggtgttgcacatcgac
ctgtggaaatgctacctctcgtatgtccgagagactaaaggaaagctccccagctacaaa
gagaagatggcccaggcatatgattttgccctggacaaaatcggtatggagatcatgtct
tatcagatttgggtggattatatcaacttcctcaaaggagttgaggccgtaggctcgtac
gcagagaaccagaggatcacagcggtgcgcagggtgtatcagaggggctgcgtcaacccc
atgatcaacatcgagcagctctggcgcgattatagcaaatatgaggagggcatcaatgtt
cacttggctaaaaagatgattgaggaccggagcagagactacatgaacgctcgcagagtg
gccaaggagtatgagacggtgatgaaggggctggacaggaacgcaccttcagtaccgccc
caaaactcccctcaggaggctcagcaagtggaaatgtggaagaagtatatccagtgggaa
aaaagcaaccctctgcgtacagaagaccagaccctcatcacgaagagagtcatgtttgcc
tacgagcagtgcctgctggtcctgggccaccaccctgacgtctggtacgaggcagctcag
tacctggagcagtccagcaagctgctggcagagaaaggggacatgaataactccaaactg
ttcagcgacgaggcagctaacatctacgaacgtgccatcgggactcttctgaagaagaac
atgctgctgtatttttcttttgccgattatgaagaaagtcgcatgaagtacgagaaggtc
cacagcatatacaacaagctgctggtcatcgaggacatcgaccctacgctggtctacatt
cagtacatgaagtttgccaggagggcagagggcatcaaatcaggccgctccatcttcaag
aaggccagggaggacccccgcacgcgccatcacgtcttcgtgtcagcagctctgatggaa
tactactgcagcaaggacaaatcagtggcctttaagatctttgaactgggtctgaagaaa
tatggcgacattccggagtacatcctggcttacatcgattacctctcccacctaaacgag
gataacaacaccagggttttgtttgaacgtgtcctcacttcaggaaacctgtctccagaa
aagtcgggtgaagtctgggctcgcttcttggcttttgagagcaacatcggagacctggcc
agtattctgaaggtggagcgcagacgattcagtgccttcaaagacgaatatgagggcaag
gaaactgccttgctggtagatagatacaagttcatggacttgtacccctgctcctccagt
gaactcaaagccctcggctacaaggatgtgtctcgtgccaaactggcagcgatgctccca
gaggctgtggtggcgccctccgcgcctacgttaaaggatgaagcggaccgtaaaccggag
taccccaaaccggacactaaccagatgatccccttccaaccacgccacctggctcctcca
gggttacatccagttcccggaggagtttttcccgtccccccacctgctgttgtcctcatg
aagttgctcccaccgccaacatgcttcaccggtccttttgtccaagtggacgagctcatg
gaaaccttcaggagatgcatgcttcccgagaccgttgacgctgctgtagagctgatcact
ggaagaccactcgatgctgcaggggagggaaacggacccatggagaaccacgctgttgcc
aagtcactgaagcggcctaacgcggactctgacgaggaggacgacaaaggagcagtggcc
cctcccattcatgacatctaccgctcacgtcaacagaagaggattcgataa
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