Takifugu rubripes (torafugu): 101074409
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Entry
101074409 CDS
T02386
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03420
Nucleotide excision repair
tru04115
p53 signaling pathway
tru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101074409 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
101074409 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
101074409 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101074409 (ddb2)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101074409 (ddb2)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101074409 (ddb2)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101074409 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
101074409
NCBI-ProteinID:
XP_003967632
Ensembl:
ENSTRUG00000015270
UniProt:
H2UPZ8
LinkDB
All DBs
Position
9:10534950..10538123
Genome browser
AA seq
518 aa
AA seq
DB search
MRTCSCRLCKQGHLFSNSVAINTGSRSFRMKNKPNKSNASASTERVTKRSDSSSSTLSKK
LKSKTESWKQEPPKPVAAQRSVHGSIVHYIYQNTLGQSPHSHMRQCLQEPFVRSLSSYHF
HGAASPFDRRVTCLEWHPTHPTTLAAGSKGGDLYLWDFKVPTKMNFVQGNGAGDFIGGMK
FCPMDLSKIYVASGEGRLSLQSFEGHTSTVLATTADCGHDYHNVCFWFCCVDVSVSRQML
VTGDNVGQLLLLSLDGQKIFSDKLHRAKVTHAEFSSRCDWLLATASVDHTVKLWDLRNIK
DKKSFVHDLPHEKAVNSAYFNPLDCSKLLTTDQYDQIRVYSSSDWSQPQHIIQHPHRQYQ
HLTPIKATWHPVYDLIVAGRYPDDRVCPGDEKTVDIYDSNTAELVFQLQDPTGSGIKSIN
KFNSLGDAIGSGMGVSVLIWDRNESLFNDQHEEEETSTSTDSSRSQRRSVQRSGRGRAAS
TAGGKLMKKKLASLEETGTKSKTTGGTKEKQTQRRKKT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgtgcagctgtaggttatgcaaacagggacatttattctctaactctgttgct
ataaacactggcagtcgcagtttcagaatgaaaaataaaccgaacaagtcaaatgcatca
gcgtcaacagagagagtgacgaaaagatccgacagctcctcatcgacgctctctaaaaag
cttaagagcaaaacagaatcatggaagcaagaacctccgaagcctgtagctgcccagagg
agtgtccatggaagtatcgtgcactacatttaccagaatacactggggcagagcccgcac
tcacacatgagacagtgtctccaggagccgtttgttcgctcgttatcctcttatcatttc
cacggtgccgccagccccttcgaccgcagggtcacctgtctggagtggcaccccacccat
cccaccactctggcagcagggtccaagggtggagatttgtatctttgggacttcaaggtg
cccaccaagatgaactttgtgcaagggaacggagctggagattttatcgggggaatgaaa
ttctgtccgatggatctttctaaaatctatgtggcttctggtgagggcagattgagcctg
cagagcttcgagggtcatacgtccactgtgctggctacaactgcagactgcggccacgac
taccacaatgtttgtttttggttctgctgcgttgacgtgtcagtaagcaggcagatgtta
gtgaccggagacaacgtgggacagctgctgctgctgagtttggatggtcaaaagattttc
agcgacaagttgcacagagccaaagtgacccacgccgagttcagttcacgctgtgattgg
ttgttggccacagcttcagtcgaccacacagtcaaactttgggatctaagaaacattaaa
gacaagaaaagttttgtccatgaccttcctcacgagaaagccgtcaactcagcctatttc
aacccactcgactgctccaagttactgaccacagatcagtacgatcagatccgcgtctac
tcatcctccgactggtcccagcctcaacacatcatccagcatcctcacaggcagtatcag
catctcacacccatcaaggccacgtggcacccagtctacgacctgattgtggctggccgc
taccccgatgaccgcgtttgccccggagatgagaagactgttgatatctatgactccaac
acagcagaacttgtttttcagctacaggatcccacaggatcagggatcaaatctatcaat
aaatttaattctctgggtgatgcgattggctctgggatgggtgtgtcagtgttgatttgg
gacagaaacgagtccctgttcaacgatcaacacgaagaggaagaaacatcaacgtcgaca
gacagttcaagaagccagaggaggagcgtgcagcgctctggccgaggcagagcagcttcc
acggcgggtggaaagctaatgaagaaaaaactagcttctctggaagagaccgggaccaaa
agtaaaaccacaggcggcacgaaagaaaaacaaacacagaggagaaaaaagacatga
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