Takifugu rubripes (torafugu): 101074496
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Entry
101074496 CDS
T02386
Symbol
colec12
Name
(RefSeq) collectin-12
KO
K10062
collectin sub-family member 12
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101074496 (colec12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101074496 (colec12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tru04091
]
101074496 (colec12)
Membrane trafficking [BR:
tru04131
]
Endocytosis
Phagocytosis
Opsonins
101074496 (colec12)
Lectins [BR:
tru04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
Scavenger receptor with a CTLD (SRCL)
101074496 (colec12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Lectin_C
Filament
Crescentin
Fib_alpha
Tropomyosin
WEMBL
DUF1664
KASH_CCD
HrpB7
CCDC90-like
Prefoldin_2
BLOC1_2
COG3_N
Motif
Other DBs
NCBI-GeneID:
101074496
NCBI-ProteinID:
XP_011606278
UniProt:
H2SWN2
LinkDB
All DBs
Position
10:complement(8227838..8248582)
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AA seq
741 aa
AA seq
DB search
MRDDFADEEEVQSFGYKRFGIQEGTQCTKCKNEWALKTSIALLYVLCSLLTIAVAVLGYK
VVQRVDTVSEGIENYGGKITAVETDLKKLDDQAGEKSENTTTEIQAFKNNIWTLQRQLSA
VQEHIHNDQVKLSQLENIGSDIQNNQGSIQGRLDSNTATLHTINGTLQSYSSVIGGLQDD
TMRLQRELQQQVKLQDQALLSISSLNFTQAQQRSLITVLQRSVDDTSQAIQRMRNDFQSL
EQTARQTRTDAAWLRSKVENLQVVANNVSALAKANNDSLEEVGSQIAAIAGEIQNTSSLA
EAHDQTLREVLDQQRDFSNLTSTKFDRLEGRLDESEESIDRVTGNISFTTQLLGSINLKL
NELRTCSETVGRHSDFLLNLNHSMTDVRTDAAGLRTQQEELASRLDKEVTNLSFVMEEMK
LVDTKHSQLITNFTILKGPPGPRGPKGDKGSQGPPGQPGQKGEKGEKGASGIRGPRGEQG
ISGPPGLPGLKGMPGVPGSPGTKGSRGSGGRAGPPGTKGEPGSAGLPGRDGQPGPQGAQG
PQGIRGAMGPPGEQGPRGLLGPVGPPGPPGPPGLPGVPIRGPVPPVGPVSMQDEAVNPTL
WAPGCPLEWLNHRDKCYFFSKDLHSFDDAKTTCELMSASLLIINDKEEQKWLRKQVQGKG
YFWMGLTDKDEENVWRWLDGTQPAFTMWKPGQPDNWNHGQDISGEDCAGLIHEALWNDFF
CEDLISYICQKELEQSRPLGS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgactttgcagacgaggaggaagtacagtcttttggatacaagcgcttcggg
atccaagagggcacccagtgcactaaatgcaagaatgaatgggcactgaagacctccata
gctctgctctatgtgctgtgttctctcctgaccattgctgttgctgtgctcggatataaa
gtggtgcaacgagttgacactgtgtctgaaggcattgaaaactatggaggaaaaataact
gctgttgagactgatctgaaaaagctggatgatcaagcgggggaaaagtcggagaacacc
accacagagatccaggctttcaagaacaacatctggactctccagaggcagctgtcagcg
gtgcaggaacacatccacaatgatcaagtaaagctgagtcagctggagaacatcggatca
gacatccagaacaaccagggctccattcagggacgtctggacagcaacacggccaccctg
cacaccataaatggcactctgcagtcgtacagcagcgtcatcggggggctgcaggacgac
acgatgcggctgcagcgagaactgcagcagcaggtgaaacttcaagaccaggctcttctc
agcatcagcagcctcaacttcacccaggcccagcagagaagcctcatcaccgtcctgcag
cgttccgtggacgacaccagccaggccatccagagaatgcgcaacgactttcagagcctc
gagcagacggcccgacagacacgcacggatgccgcgtggctccggagtaaggtggagaac
ctgcaggttgtggccaataacgtgtcggctcttgcgaaggccaacaacgacagtctggag
gaggtgggttcgcagatcgctgccattgccggcgagatccagaacaccagcagcctggct
gaagcccacgaccagaccctgagagaggtcttagaccagcagagagacttcagcaacctc
acctccactaaattcgaccggctggaggggcgtctggatgagtcggaggagagcattgac
cgcgtgaccggcaatatcagctttaccacgcagctgctgggctctattaacctgaagtta
aacgaactgcgcacttgctccgagaccgtcggccgccactcagacttcttactgaatctc
aatcatagcatgacagacgtacggacagatgcagccggcctgaggacgcagcaggaagag
ctggcttcacgtttggataaggaggttaccaacctctcttttgtcatggaggagatgaaa
ctggtggacacaaaacactcccaactcatcaccaacttcacaattttaaagggtcctcct
gggcccagagggccaaagggggacaaaggatctcaaggaccacctggccagcctggtcaa
aagggagaaaaaggggagaaaggtgcctctgggatacgagggccacgaggagaacagggt
atttcgggtccaccgggcctaccagggttaaagggtatgccaggtgtacctggcagccct
gggaccaagggctcacggggatctggaggaagggctggtcctcctggaacaaaaggagaa
ccaggttctgctggtttacctggacgagatggacagcctggtcctcaaggagcacaaggt
cctcagggcatcagaggggcaatggggccacctggggagcaggggccaaggggactgcta
ggaccagtaggccctccagggccaccgggaccacctgggttaccaggtgttccaatacgc
ggtccagtacctcctgtaggcccggtgtctatgcaagatgaggctgtgaaccctacactg
tgggcaccaggttgtcctcttgagtggctgaatcacagggacaaatgctactttttctcc
aaagacctgcacagctttgacgatgcaaagacaacttgtgaattaatgtctgcatccttg
ttgatcatcaacgacaaagaggaacagaaatggctgaggaagcaagtccaagggaaaggt
tacttctggatgggtctgactgataaggacgaggagaatgtttggcgctggctagacggg
acgcagcctgctttcacaatgtggaagcccggtcagccggacaactggaaccacggtcaa
gacatcagcggtgaggactgtgcggggctcatccacgaagcgctgtggaacgatttcttc
tgtgaagatctcataagctacatctgccagaaggaactggagcaatcgagacctctgggt
tcatag
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