Takifugu rubripes (torafugu): 101074503
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Entry
101074503 CDS
T02386
Symbol
pcdh9
Name
(RefSeq) protocadherin-9 isoform X4
KO
K16498
protocadherin delta 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101074503 (pcdh9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tru01009
]
101074503 (pcdh9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tru04515
]
101074503 (pcdh9)
Protein phosphatases and associated proteins [BR:
tru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101074503 (pcdh9)
Cell adhesion molecules [BR:
tru04515
]
Cadherins
Protocadherins
101074503 (pcdh9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
RCR
MAP17
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
101074503
NCBI-ProteinID:
XP_011608389
Ensembl:
ENSTRUG00000017191
UniProt:
H2V4B1
LinkDB
All DBs
Position
13:15933474..16068681
Genome browser
AA seq
1030 aa
AA seq
DB search
MDLKDYYLLGALLACLLIDPSIAQELIYPIREELQENVLIGNIPKDLNISHTNAATGVSA
NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT
VTDVNDNRPVFKEGQIEVHIPENSAIGTSVVQLQATDADIGANAEIHYVFGTQVSPATKR
LFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNAPIFTQPVIELAVMEN
NKRDLFLTTISATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQTQATVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVSLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NKGLFRIDPVTGNITLEEKPAVTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
TLIYDLIRRTMETPIDRNIGESSETYQSGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHA
SRFKAAQRKKQGTEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKPTDPAHEPIN
GTISLPTELEEQGIGRFDWNATPTTTFKPNSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPMHTRQQSLPRKISS
NQSIWNLGGN
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaagattattacctgttgggtgccctgcttgcctgtttattgatagaccct
tcaatagctcaagagctaatttaccccatcagagaggagctgcaagaaaatgtcctgatt
ggaaacataccaaaggacctaaacatttcccacacaaatgctgccactggagtgagtgct
aatcttgtgtaccggctcgtctctaaagctggagataacccactagtgcgcgtgctgagc
agcactggcgagattttcacgacatcgaaccgaatcgacagggaaaagttgtgccccggc
ccgtcgtttgaggacagcgagtgctcgtttgagattgaagtagtcatactgcctaatgat
tatttcaggctgataaagatcaaaataattgtcaaggacacaaatgataatgccccaatg
tttccgtcccctgtgatcaacatctccatcccggagaacacgctcattaacagccgattt
gcaattccctctgccactgacccagacactggccccaacagcgtgcacaagtacgagctg
atcaacgggcagagcgccttcggcttagacatagtggaaacgccagaaggggagaaatgg
ccccagcttattgtgcagcagaatctggacagagagcagaaggatacgtacgtgatgaag
attaaagtggaggacggcggcagtccgcagaaatccagcactgctattctccaagtgaca
gtaacagatgtgaatgacaacagaccggtgttcaaagagggacagattgaggtgcacatc
ccggagaactccgctatcggcacgtctgtcgtgcagcttcaagccacagacgcagacata
ggagctaacgcggagattcattatgtatttgggactcaggtgtctcctgccaccaagaga
ctctttgcgttaaattccacatctgggctaatcacggtgcagaggcctctggacagagag
gagactgcgattcacaagctctctgtcttagccagtgatggaagctcgagtccggccaga
gctactgtcaccattaatgtgactgatgtcaacgacaatccacctaatattgacctgcga
tacataatcagtcccatcaatggcaccgtttttctgtcggagaaggaccccatcaacacc
aagatagctctcatcacggtgtccgacaaagacactgatatcaatggcaaggtcatttgt
tttatagagaaggacgtgcccttccatctcaaagccgtgtacgacaaccagtatctgctg
gagacgtccgcgctgctcgactacgaaggaaccaaggagtacaacttcaagattgttgca
tctgactccggaaagccgagcttgaatcagactgccctggtgagggtgaggctggaggat
gaaaacgacaacgcgcctatttttacccagccggttatcgagctagcggttatggagaac
aacaaacgcgacctgttcctcaccactattagcgccactgatgaggacagcggaaagaac
gcagagattgtttatcagctagggccgaacgcgtcgttcttcgatctggatcgcaaaacc
ggagtcctgacggcatccagggtttttgaccgggaggatcaggacaggtttctcttcact
gtaacggcgagagacaacggaacgccgcctctgcagacgcaggcgaccgtcatcgtaacc
gtgcttgatgaaaacgacaacaaccccaagttcacgcataaccactttcagttcttcgtg
tctgagaatcttcccaaatacagcaccgtgggggtaataactgtgacggactcggatgcc
ggggaaaatgctgctgtctcgctttccatactgaacgacaacgaaaactttatcctggac
cctttttctggggtgataaaatccaacgtgtcgtttgatagggagcagcagagctcctac
accttcgacgtcagggccgtggacagcggcagacctccctgctcctcggctgccaaagtg
accatcaatgtcatcgacgtgaacgacaacacgcccatcgtcatctaccccccctccaac
acgtccttcaagcttgtccccctctcctctatacctggatccgtggtggcggaggtgttt
gctgttgacggggacacgggtatgaacgctgaactgaaatataccatcgtgagtgggaac
aacaaaggactcttcaggattgacccggtaacagggaatattactctagaggaaaaaccg
gcagtgaccgacataggattacacagattagtggtcaatatcagtgacctgggatatcct
aaatctctgcatactctcgtattagtatttctctatgtcaacgacaccgtgggcaactcc
acgctcatctatgatctcatccgacgcaccatggagacgccgattgatcgaaatatcggc
gaaagcagcgaaacttatcagagcggagactatttaacgataatgatagccttcgtgacg
ggtgcgttggtggtgattatcgtcatattcgtcaccgtactgctgcgctgccgccacgcg
tccaggttcaaggctgcacagaggaagaaacagggaacagagtggatgtcgcccaacacg
gagaacaagcagaacaagaagaagaagcggaagaaaaggaagtcccccaaaagctccctg
ctgaacttcgtcaccatcgaggggaacaaacctaccgaccctgcacacgaaccaatcaac
gggaccatcagcctccccacagagctggaggagcaaggaattgggcgctttgactggaat
gccacacctactacgaccttcaaacccaacagtccagacctggcccggcactacaaatct
gcctcgccgcagtcggccttccacctcaaggctgacaccccggtgtcagtgaagaagcat
cacgtaattcaggagctcccactggataacacgtttgtcgggggatgtgacacgctttcc
aagaggtcctccacaagttccgaccacttcagtgcctcagagtgcagctcccagggaggg
ttcaagaccaaagggcccatgcacaccagacagcagtcacttccacggaagatcagctcc
aatcaatctatatggaatctgggaggaaattaa
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