Takifugu rubripes (torafugu): 101074572
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Entry
101074572 CDS
T02386
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X4
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tru03036
]
101074572 (tdrd12)
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
101074572 (tdrd12)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101074572 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
101074572
NCBI-ProteinID:
XP_011605446
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All DBs
Position
9:complement(5755841..5766707)
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AA seq
1316 aa
AA seq
DB search
MLQMNLFYHDVTKDQQELKPSVLEEGQVCVVYWSVLQSWCRAVVESLIVDSVCCTARCLL
VDHGEHLVVSSDQIRVVTQNFLQLPFWVKRLHLMGIKPTTLQVDVLEERAKLIPSTQWDS
SATLYLHNLLRVSTKSEVVLLDLATDPTPIMLYVTVGNIKICVNDDLVAKKFALYNSQLA
AGYELDEVDQEPVMLPASILKQTACTTTRVAVPVLHQSWSMGGACDHLAPPSTPKRPQHK
LEWSEDGHVCAGSQAVFRLAEGAENDDAGDDDDDGGAAAECAEDDDDGAAADGAEDDDGD
VADRNEAECVGEKTEERRYENALWCEAAQRTCSREQDVMCARFLKWLNPDLLDHDPDALE
CKQYSFEQAQSSHVIGPQVVPSGPSKSTVLVHSALPVEPCSSWDDAPIMEHLRRGWWRAQ
YSTLSPADCYSWPAMARGCNTLVISQNSEQPLSYLAPFLTNILLSSIFTCQTSSKGPIAV
VLCSGWEKAQVVYDLLEEIKVNQTLHSIIILLGLKEDEAKAFKIPKNCLLLVTTPFTLVR
LLSCHCFLFLRLSHLVLDEADRLFTLAPEQMVTILQHFQKGNLKGEPMSRCHQLVAVAKR
WSGHMGHLLANYMPHPCIVLSVLEEVALYADIQQIVLVTMESKKSSELLDLLDLNPNIGQ
KTLVITRSALEVEEVFKALSSKSAFCLMVHETLTHRFDCVMEQWREDIGPSTHIILVTST
ECLKSLSIRDATSIIHYDFPASPKVFGQRLFCMADNFRNLSEQAPLQALAVVCPAPVQSV
LFISERSTSHSVGILHYLERTCAQLPPQLLSFVQGVLAAREEQKMDRPLCSYLKTIGVCR
DSSGCPDRHRLIYHLDQPLLPTTGLIEVQPLYVKTASVFYGRIIRKECHDDFQSMVTDLT
SHYAEKKLAARQVKEGGLYVVQEATEFHRVKILSVSDRSDRLFSSNVVWFIDVGKTEEVK
SYQLLELPQRYHSVPSQAVEMIVCGVRPADSEKDWHPKVTRAIREKIQGVPHQARVVFTL
GRTVFLDPMVCVAHIPGMRTVINEYNVHTEILNTGMAVKNPDHLDLLRALCQEMGHMSGS
GEAAVSLGARIQAEETVLGDCSYSEPLGLGSPVTQALLPVEPAGRDAVAYPAAICEESSL
IISRTSEDGRLYSSTSQPTAIHLCEDGSRLLSKGSAHQEPTRSFHPQVRWYQTRDFVMVT
VKLLNPEDQSCHFYPDRVVYSGRANGRKYWADLELQASIHAESCCWEMSCNEPVLKLVKQ
KQGYWERFSRNKNIFVSYDTEHFEKEEAIALNGPWFVEETGEDNWYMNSDSTSESD
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagatgaacttattctaccatgatgtcaccaaggaccagcaggagctgaagccc
tctgtgttagaggaggggcaggtttgtgtagtgtactggtctgtgctgcagtcatggtgc
cgggccgtggtggagtcgctcattgtggactctgtgtgctgcacagctcgttgcctgctg
gtggaccatggagaacatctggttgtttcctctgaccagatccgagtggtgacacagaat
ttcctccagctgccgttctgggttaagaggctccatctgatgggaatcaaacccacaacc
ctgcaagtggatgtgttagaggagagagcaaagctcataccgtccactcagtgggacagt
tcagctacactttacctccacaacctgctacgagtgtctactaaatcggaggtggtgctg
ctggatttggcgacagaccccacccccatcatgctgtacgttactgttgggaacatcaag
atttgtgtcaacgatgatctggtggccaagaagtttgcgctgtacaacagccagctggct
gctggttatgagctggatgaggttgaccaagaacctgttatgttaccagcttctatcctg
aagcagaccgcctgcacgaccacgagggtggcggttccagtgctgcatcaaagctggtct
atgggtggagcatgtgaccacctggctcctccatccacacctaagaggccacaacacaag
ctggagtggtcagaagatggacatgtgtgtgcaggcagccaagcagtgttcaggcttgct
gaaggtgctgaaaatgatgatgctggagatgatgatgatgatggtggtgctgctgctgaa
tgtgctgaagatgatgatgatggtgctgctgctgatggtgctgaagatgatgatggtgat
gtcgctgacagaaatgaagctgaatgtgttggtgagaaaaccgaagaaaggaggtatgag
aacgctctgtggtgtgaagcagcacagaggacgtgcagcagggagcaggatgtcatgtgt
gcacgctttttgaagtggttgaacccagaccttctggaccatgatccagatgctctagag
tgcaaacagtacagctttgaacaggctcaaagctcacatgtcattggccctcaggttgtt
cccagtggtcccagtaagagcaccgtccttgttcactctgcccttccagtagaaccctgc
agcagctgggatgatgcccccatcatggagcatctccgcaggggctggtggagggcacag
tacagtactctgtctccagctgattgctatagctggccagctatggctcgtgggtgcaac
acgctagtgatctcacaaaatagtgagcagccgctcagctacctggctccgttcctgacc
aacatcctgctgagttccatcttcacctgccaaacctccagcaaagggcccatcgctgtc
gtgctgtgttcaggctgggaaaaggctcaagttgtctatgacctgctggaggagataaag
gtcaaccaaacccttcactccatcattatcctgctgggcctcaaagaagacgaggctaaa
gccttcaagatccctaaaaactgccttctgttggtgaccactcccttcaccttggtccgt
ctgctgtcttgccactgttttttgttcttgcgtctgtctcatctggtgttggacgaggcc
gaccggctattcacacttgcacctgagcagatggtgaccatcttgcagcatttccagaaa
gggaacttgaagggggaaccgatgtcccgttgtcaccagctggttgctgtggccaaacga
tggagtgggcacatgggccacctgttagccaattacatgccacacccctgcatcgtgctg
tctgtgttggaggaggtggctctctatgctgacatccagcagattgtcctcgtaactatg
gagagcaagaagagttctgaactgctggatttgctggatttgaatcctaacattggtcag
aagactctggtcataaccagatctgctctggaggtggaagaggtgttcaaggctctgagc
agcaaatctgctttctgcctgatggtacacgagacattgactcatcgctttgactgtgtg
atggaacagtggagggaggacattggtcccagcactcacatcattctggtgacctccacc
gagtgtctgaagagtttgagcatcagggatgccacgagtatcatccactacgactttcct
gcgtctcccaaagtgttcggtcagcgactcttctgcatggctgacaacttcaggaacctt
tccgaacaggctcctctgcaggccctggctgttgtctgccctgctcctgtgcagtctgtg
ctgttcatctctgagaggagcaccagtcacagtgtggggatcctgcattacctggagcgg
acctgtgcccagctgcccccacagctactctcctttgtccagggtgtccttgctgcccgt
gaagagcagaagatggaccgtcctctctgcagctatctgaagaccattggagtctgcaga
gacagcagtgggtgtcctgatcgccacagactgatttatcatctggatcagccactgctt
cctaccacaggacttatagaggtccagcctctctatgtaaaaacggcgtcggtcttctac
ggtcgtattatcaggaaggagtgccacgatgattttcagagcatggtgaccgacttgacg
tctcactatgctgagaagaagcttgcagccaggcaggtgaaggagggaggcctgtatgtg
gtgcaggaggccacagagttccacagggtgaagatcctgtctgtctctgacagaagcgac
cgcctattttccagcaatgtagtttggtttattgatgtcgggaaaacggaggaagtcaag
tcctaccagctcttggagctccctcaacggtaccactctgtgcccagccaggctgtcgaa
atgatcgtctgtggggtcagaccagccgacagtgagaaggactggcacccaaaggtcacc
agagcgatccgtgagaagatccaaggtgtgccgcaccaggccagagtggttttcactctg
gggaggactgtgttcctggatcctatggtatgtgttgcccacattcctggaatgagaact
gtgatcaacgagtacaacgtgcacacagaaatcctcaacactgggatggccgtcaagaac
cctgatcacctggacctgctgagggcactgtgccaggaaatgggtcacatgtctgggtcg
ggagaagcagcagtatctctgggggccaggatccaagctgaggagactgttctgggtgac
tgttcttactctgaaccccttggtctaggatctccagtgacacaggccctgctcccagta
gaaccagcgggaagggatgctgttgcctacccggctgcaatttgtgaggagtcgtctttg
ataatctcaagaaccagtgaggacggcagactttactcctcaaccagtcagcccacagcc
atccacctctgtgaggacggtagcaggctgcttagcaaaggttcagcccaccaggaaccc
accaggagtttccaccctcaggtccgctggtaccagacgcgtgactttgtgatggtgacg
gtgaagctgctgaatccggaggatcaaagctgccacttctacccagacagagtcgtttac
agtggtagagcaaacggacggaagtactgggctgacttggagcttcaggctagcatccat
gctgagagctgctgctgggagatgagctgcaatgagccggtcctcaaactagtgaaacag
aagcagggatactgggagcgcttctctaggaacaagaatatttttgtgagctacgacacg
gagcactttgagaaggaagaagccatagccctgaatggtccctggtttgtggaggaaact
ggtgaggacaactggtacatgaactcagacagcaccagtgagagtgactga
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