Takifugu rubripes (torafugu): 101074859
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Entry
101074859 CDS
T02386
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101074859 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101074859 (taf6l)
03036 Chromosome and associated proteins [BR:
tru03036
]
101074859 (taf6l)
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101074859 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
101074859 (taf6l)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101074859 (taf6l)
STAGA complex
101074859 (taf6l)
TFTC complex
101074859 (taf6l)
SAGA complex
101074859 (taf6l)
SLIK complex
101074859 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
101074859
NCBI-ProteinID:
XP_003966840
Ensembl:
ENSTRUG00000012717
UniProt:
H2U5H1
LinkDB
All DBs
Position
8:11177400..11181977
Genome browser
AA seq
639 aa
AA seq
DB search
MNDRDERRFAEVSHESVRLMAESAGVELDDDVAALLAEDVCYRLREATQSSSQFMKHAKR
RKLTVEDFNRALRWSNVEAIFGCGAQDATPFRSLKDGELFLVEDRDVNLVELALATNIPK
GCAETVVRVNVSYLDGKGNLESQGTVPTAVQSLSDELMKYYQQVTRAILGDDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVRNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWIHGDLVGGLYHQVLLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDNSVSNAQVKADGHKVYG
AILVAVEQLLKLKALSQPAEGAHTGPLGSVLGATAYNMRSPGLSPPPESLSDAASGIASH
LQAGGACCPWEEWTPVSLPAMYSELYSFFGDSLAVRFSTGSGFGSCPPCTLFQLNDAKKE
LPSSASNSETTRKMPQLTANLNISPSQDGSPCPDSQLPSLTAAGSARSLARSSSSSVQRS
RSYTSRSGQHSAGPPRDIFPKACFTSNQIGHPGFSFLIGGRQMGRRCQGRRPFQTTFTPT
LPFSAIPPRVFAHKLPVIGRVGKPVRHWTRSHYSLHLPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccgggacgagcgtcgcttcgcagaggtttctcatgagtccgtcagactcatg
gcagaaagcgcaggagtcgagctcgacgacgatgtggctgcgctcctggccgaggatgtg
tgttaccgcctcagggaagccacgcagagtagctctcagttcatgaaacacgccaaaaga
agaaagctgacggtggaggacttcaacagagctctgcgctggagcaacgtggaggcaatt
tttggttgcggggcccaagatgcaaccccatttcgttcactgaaagatggcgagcttttc
ctggttgaagatcgagacgtcaacctcgtggagctcgctttggccacgaacattccaaag
ggttgtgccgaaactgtagttcgggtgaatgtgtcttacctggatgggaaaggcaacctg
gaaagtcagggcacagttccaactgcagtgcagtctctgtccgatgagctgatgaagtat
taccagcaggtcacacgagccattctgggggacgacccccacctcatgaaggttgctctc
ttggaccttcagtcaaactccaagatcgctgccctcctgccctactttgtttacgtcatc
agtggggtgaaatcggtcagtcacgacttggagcagctcaacaggctcctccacatggtc
aaaagcctcgtccggaacccttacctctacctgggctcctacgtacgcagcctagtgtcc
agcgtcatgtactgcatcctggagccactggctgcatccatcaacccgctcaacgaccac
tggaccctcagggattacgctgccctgctgctcagtcacatattctggattcatggtgat
ctggttggtggtctctaccatcaggtcctgctctcgctccaaaaggttctgtctgatcca
gtcagaccattgtgctctcactacggagctgtggtaggacttcatgccctgggctggaag
gctgttgaaagagtcctgtttccacatcttcctgcctactgggccaacctccaggctgtg
ttggatgacaactctgtttccaatgcacaggtcaaagctgatggacataaggtctatgga
gctattttggtggcagtggagcagttgctgaagttgaaggctctttctcagccagcagag
ggagcccacactggtccgctgggctctgtgctgggtgcaacggcctacaacatgaggtcc
cccggcctcagtccccctccagagtctctgtccgatgcagcctcgggaatagctagccac
cttcaggcgggtggggcctgctgcccctgggaagaatggaccccggtctctctgcctgcc
atgtactcggagctctactccttcttcggtgacagtttggctgtcaggtttagtactggg
tctgggtttgggagctgccctccctgtaccctgttccaactcaatgatgctaagaaggag
ctccccagctctgcttctaacagtgaaaccactcgaaagatgcctcaattgaccgccaac
ctcaacattagccccagccaggatggaagtccttgtcccgattcgcagttgcccagcctt
acggccgctgggtcggccaggtctttggctcgctcctcttcatcttctgtgcagcgctcc
aggagctacacatcgcggtcaggccagcactcggccgggccgcctcgggacatcttcccc
aaagcttgtttcacctctaatcagatcggacatccaggattctctttccttattggaggg
cgccaaatgggccgtcgctgccaaggccggcgcccctttcaaaccacttttacgccgact
ttacccttttctgccatcccaccgcgtgtgtttgcccataaacttcccgttattggtagg
gttggaaaacctgtacgccactggacacgttcccattactcccttcacctgccactttag
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