Takifugu rubripes (torafugu): 101074881
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Entry
101074881 CDS
T02386
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03018
RNA degradation
tru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101074881 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
101074881 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101074881 (lsm7)
03041 Spliceosome [BR:
tru03041
]
101074881 (lsm7)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101074881 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
101074881 (lsm7)
Spliceosome [BR:
tru03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101074881 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
101074881
NCBI-ProteinID:
XP_003974227
Ensembl:
ENSTRUG00000022913
UniProt:
A0A3B5K7X9
LinkDB
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Position
20:complement(9625555..9626985)
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QMKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagaaaagaagaaaaaagagagcatcttcgacttgtcaaaatatatcgac
aaacatattcgtgttaagtttcaaggaggacgagaagccagcggtgttcttaagggcttt
gatccgctgttaaacctggtgttggatgggacaatagaatatatgcgagatcctgatgac
cagatgaagctgacagaagacaccaggcagctggggctggtggtgtgcagaggaacatca
gtcgtgctcatctgtcctcaggacggtatggaggccataccgaacccgttcatccagcag
caggatggctag
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integrated database retrieval system
