Takifugu rubripes (torafugu): 101074883
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Entry
101074883 CDS
T02386
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101074883 (vps13a)
Membrane trafficking [BR:
tru04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
101074883 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
101074883
NCBI-ProteinID:
XP_011613853
UniProt:
H2RYT7
LinkDB
All DBs
Position
21:complement(12764605..12790527)
Genome browser
AA seq
3264 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLTNLEINENALSQLDIPFKVKAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPLASIKYDAEKEEKQLQEARQRKLQQIET
KLTADDQENSTLEKQDTFVEKLVTQIIKNLQVQISNIHVRYEDNVTNPDSPLSIGVSLKN
LSLQTADENWTPSLLDENSRLFFKLVRLDNLFSYLNVNSVLFSNYSTEEALQCLQRSMEV
YDSDSSNHDFIFRPISVDAKLQMNPRSDVDFSSPKTDLTVNLSEVAIELNRSQYVSVLEL
LGSVYMMSRNLPYRKYRPVVQVHRNASIWWNYAITSVLEVDVKPRLHMWSWWHIRCHRQM
VKSYKELFKTKITSKKPTEELLKALEEPEKTLDIFNITLARQQAEVEASKAGLCIYRPGM
KMEEEQSQGWLSWMWNWGGEAEKPKDVKTGGFDDLLTPAEKDKLYTAIGYSETDVNHNLP
KNFEDTKINFHMERLSLSLKDKDKDKNEIMKVTVGELKSTLTQRSGAEAIKVTAELSLFE
VTGLASQRSAPTLLSSRKAATAGTPLLSFLFETNPIDETSNQKLHVQSQPLEIIYDAITV
NTMSEFFKAPGDVQLDELTNATLMKLEQFRDRTATGLLYVIETQKVLDLKVDLMASYVIV
PETGFYSGTQNILLLDLGHFKITSLSKKDLPQLTVNTSNLEEIMSRAYDSFDVQLSNLQL
LYSKPESDWKVARKQRESPLHILEPVDLTVTFSRAMVVKDSRMAKYKMSGTLPLLSLRIS
DDKLRSILGLIYSIPLPKSSGPSPGSLQAPVLKLKSTPQLTPRKFLNLPDQRSSLMFESC
DAISITSLGSEEDLFYDAPSSPVGDRAFFSDNPLPLRYADLHKRSLVKEDIPKNMTDFIM
TFVINTFSVELCRLSEDQEITVLHLDIENLGTELKINTFDMTSNTYLREICLKCPEYMDS
ENKPVQLLTTLDNSEVDLLILEYIKADKTGPEFKTQHKNTEQLIKVTFSSLDVHLHTEAL
LNAMNFLNNLLPPPAKKEEGEGGQEELPTILEEDETEKEEEKTMETVVTKKKTSKITKFA
DVVNLHIRADLRCLKVFIRGQKARISEIIIEGLVSQVLMKKKEMEVQANLKSIVILDCAQ
DAMYKKAVSIADKEVFAFQMVNYTDATEGDAYLDMSQVDTAVTLNVGCIQVIFLNKFVST
ILAFINNFQEAKEALVVVTAQAAEKAATGVKELAERSSRIRLNVHFNAPVIFLPQSSSSS
NVIVADLGLLSVKNRFAKQPFKSIVKIPPVVDIMTVRLTNLKMYRTTYINGGFQGEIQLL
EPVNLDLEIQRNLSSNWYHSIPDIGITAHLKPISLILSQSDMTVILRTLSENLSENSDVP
PPALPSTGAASSDAASNKESQGSTGPASSNTVVTAAVVETQQNIKMKTTLKLDFKFDSMT
LSLYSPDENVVHLVDSRDEQLKLAEFTLGTISTSVNRFSDSSMKASVQLATCLLDDKRPK
IKTVTPRMMGLRPGAEQNKMVEVHYRQGREGISVETVVQDVYLCASMEFLLTVADVFLKA
TQHGFAQVPQPKTSAGAGEKKQVNSTVTSKEPNVMSKTEISLLLRNPDIVFVADLTRADA
PALVMSTQCELLMKSCAEGSQITAVINDLKVMACPFLSEKRKNNMTTVLQPCQVFFQSTQ
TPTSPQAMEVSMNALTLKVSPLIINTVITILSVLSPAAETPEELDSPVPVDLWEKRSWKD
LKFWFLEEGGDEDTKSLTPLVPQGESLQMNIKSICLTLEAGVGHRTIPMLLAKSSFNGDV
KNWSTLINLHSKLDLEVHYYNEIMGVWEPLLEPLEDETGEGFRPWRLVLKMKKKPVSFPG
LSDEVDYQIPDYKTVIVISSKDQLNITLSKCGLTMLNHLGQAFAEAAKQTSDSFQKEEAP
FVVKNRLGLPVSVRYSEMFSPIGQQSTTFTVELQDGETLGMDYSTKTESDQFSAMISLSG
KEYYIQPTPMGHTSASVIPLIKVGKGMYSVVHTESGVTCFLVCQISSVEGSKYIKIRSPF
QIINHFQIPFKVFEGSTCLGKALPNEEFCVPLDSYRSELSLQPVLVDDDQGEQFECSEGF
SYEDVSIEPPTKRLEQTCRRRSGEGGVLMVNMVPVKDAVTFKHTGDVGENFDVPFVVHLW
PSILLRNLLPYPISYKLKDSGVSAPEATLNPGHSAQLYTAVINQSSVDLCLLNYLSQDWS
SVYSFLSDQEEITFIVFQSERDPNEDDEGPEMKRAELDIAVHVKYDLGQMVVAIHSPYWM
VNKTSRLLQYKADDIHRKHPLDYDMPLLFSFKPRYFLKNNKVRLMISDSELSDEFSLDTV
GSHGDVKCKGRYKDYLVGVKIEASSFTLTRIVTFVPFYTLVNKTKESVFICEDGLDNWTE
AQPEESGIPFWPENDTKRLKIKVEGCTLPPCSIDFTRQENCLLLHMDNSFGGIIVDVNLL
EHSATIRFSEYHDGAAPFLLINHTKGQTLQFYQSARTDSAWVANDLLDLSFSMEEDSSQK
EEEKDELEPGKAVYYTWAESTGSRELCWKCGTYSGKLKSEEDVCLDINSEKKLFVLSFYE
GLQRVVLFTEDQHTYKLLCESEKVQLAEQEILLSLQNMGVSLVNNNSSQEVSFIGITSSD
VVWELKPGKKNRWKTLSTKETEMLENSYKHYVDTEPLDNGIVNLENGYQVSFTPNGVDMR
MLQPCSAPLRRHFLPAVKVEYSVSPRQSAYRVQIHRIQIQNQLPGAIFPYVFYPVKLPKS
ITMDSEPKPLTDISIVTRTAGHSNISRIKYFKVLIQEMDLKLDLGFLYAILDLFSPENAS
VMSPEQEAELFETDLENIKMVLNSVSAADTSPISLYEYFHISPIKLHLSLSLSTGGEDGM
KQERDTELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELNFQFYTTQQLQWEVIRHYSK
QAIKQMYVLVLGLDVLGNPFGLIRGLSEGFEAFFYEPYQGAIQGPEEFVEGMALGVKALV
GGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRREAMNRQPSGLREGLARGGKGLVSG
FVSGITGIVTKPIKGAQREGAAGFFKGFGKGLVGAVARPTGGIIDMASSTFQGIKRAAET
SQDVESLRPPRFIHEDGVIRPYKEREGLGSQMLQKIENGRYAKYKYFAHAKVNESDILMI
TKRGIFFVTKGTFGQLTCEWQYLFEEFTKDPMIVEHRRLRIEAKERVKSVFHAKEFGKII
NFRTPEIAKWVLAKLDDARENLPK
NT seq
9795 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgaaagcttggtggtcgatgtcctcaaccggtttttaggagactatgttgtc
aaccttgacagctctcagttaaagctcggcatctggggaggtgatgcagttctcactaat
cttgagataaatgaaaatgctttgagtcagcttgacattccttttaaagtgaaagctggt
catataggacggttggagctgaagatcccatggaagaacctctacacacagtcagtagag
gcgacattggatggtgtctatctcctcattgtccccttagcaagcataaagtacgatgca
gaaaaagaggaaaaacaacttcaagaggctcgtcagagaaaactacagcaaatagagaca
aagttgactgctgatgaccaagaaaattctacattggaaaagcaggacacctttgtggaa
aagcttgtcactcagatcatcaaaaacctgcaggtgcagatctccaacatccacgtgcgc
tatgaagacaacgtcacgaatccagactcgcctttgtctatcggagtgtcactgaaaaac
ctcagtcttcagacggctgatgagaactggacccccagccttttggatgagaattccagg
ctgtttttcaagcttgttcggcttgacaacttattttcgtatttgaacgtcaactccgta
ctcttctccaattatagcacagaggaggctttgcaatgcctccagaggagtatggaagtt
tacgattcggattctagcaatcacgacttcatttttcgtccaatatcagtggatgctaaa
ctgcagatgaatccgaggtcagatgtggacttctcctctcccaaaacagacctcacggtc
aatctgagtgaggtggccattgagctcaacagatcacaatatgttagtgtcctggagctg
ctgggatccgtgtacatgatgtcacgcaacctgccgtacaggaagtacagacccgtagtc
caggttcacaggaatgcctccatatggtggaattatgcgatcacaagcgttcttgaggtc
gatgtgaagcctcggctacacatgtggtcatggtggcacatccgctgccatcggcagatg
gtgaagtcttacaaagagttgttcaagaccaaaatcaccagcaagaaaccaactgaggag
ttactgaaggccctcgaggaaccggaaaagacattggatatttttaacatcactctggct
cgacagcaggctgaggtggaggccagcaaggcagggttgtgcatttaccgtccgggcatg
aagatggaggaagagcagtctcagggatggcttagctggatgtggaactggggaggagag
gctgaaaaaccaaaagatgtcaaaactggaggctttgatgatctgttgacgcctgctgag
aaggataagctgtacactgccattggatacagtgagacagatgtcaatcacaacctgcca
aagaattttgaggacacaaagatcaattttcacatggaaaggctgtcgctgtccctcaaa
gacaaggacaaggacaaaaacgagatcatgaaggttactgtaggcgagctcaagtccaca
ctcacacagcggtctggggcagaagccatcaaagtcacagcagagctcagtttgtttgag
gtgacaggcctggccagccagagatctgcccctaccctcctgtcatcgaggaaggcggct
acagctgggaccccgctcttgtccttcttatttgagaccaacccaatagacgaaacctcc
aaccagaagttacatgtgcagtcgcagcccttagaaatcatctacgatgctattacagtg
aacaccatgtcggagttcttcaaggctccaggagacgtgcagctggatgagctcaccaac
gcaacactaatgaaactggagcagtttcgagatcgtacagccactggtctactgtatgtg
attgaaacacagaaagttcttgacctgaaagtggaccttatggcctcctatgtcattgtt
cctgagactggtttctacagtggtactcagaacatcctgctgttggatcttggtcatttc
aagataacaagtctaagcaagaaagatcttcctcaactgaccgtgaacacgagcaacctt
gaagaaatcatgtccagagcctacgacagctttgacgtgcagctcagcaacctgcagctc
ctgtacagcaaaccagaaagcgattggaaagtggcacgtaaacagagagagtcaccccta
cacatcttagagccggtcgatttgacagtcactttcagcagagcgatggttgtaaaagac
tcccgcatggcaaagtacaaaatgtctggaacgctgcctctgttgtcacttcgcatttct
gatgataaactacgaagtattttggggttgatatacagcatacctctgccaaagagctct
ggcccttcccctggcagtcttcaagcccctgtattaaagctaaaatccactcctcagctc
actcccagaaaattcctgaacctaccggaccagcgctcatcgctcatgtttgagtcctgt
gatgccatcagcatcacctcattgggatcagaggaggatttgttctatgatgctcccagc
tctcccgtcggtgatcgagccttcttttctgataatccgctgccgctacgctacgcagac
ctacacaaaagaagtcttgtcaaagaagacattccaaagaacatgactgactttatcatg
acgtttgtcatcaacacgttttctgtcgagttgtgccgcctgtcagaagatcaggagatc
accgtactgcacttagacatagaaaatctgggcactgagttgaaaattaacacttttgac
atgacatcaaacacttatctgcgagagatctgcctgaagtgccccgagtacatggattct
gaaaacaagccggttcagttactcaccaccttagacaactcagaggttgacttgctcatc
ctggagtatattaaagctgataaaactggcccagagttcaagactcagcacaaaaataca
gagcagctcattaaggtgaccttttcatccctggatgtccatctacatactgaggcccta
ctcaatgccatgaacttcctaaacaacctccttcctcctcctgctaagaaggaggaagga
gaaggagggcaggaggagctccccaccatcctagaggaggatgagacagaaaaggaggaa
gagaagacaatggaaactgttgtcaccaagaaaaaaacatcaaagattacaaagtttgca
gatgtggtaaatctgcatatcagagcagatctccgatgtctgaaggttttcattcgaggg
cagaaagctaggatctctgaaatcattattgaaggtctagtttcccaagtactgatgaag
aagaaggagatggaggtacaggcaaacctgaagagcattgtcatcttagactgtgcccaa
gatgcaatgtacaagaaggctgtgtcgatagcagataaagaggtgtttgcctttcaaatg
gtaaattatacagatgcaacagaaggagacgcctatttggacatgtctcaagtcgatact
gccgtcaccctgaatgtgggatgcattcaggtcatcttcctcaacaaatttgtttccacc
attttggcctttattaacaacttccaggaggctaaagaagctttggttgtggtgacagcc
caagctgctgaaaaggcagccactggtgtaaaagagctggcagagaggagcagtcggatt
cgtttaaatgtccactttaatgctcctgttatcttcctgccgcagtcctcttcttcctcc
aatgtcatcgtagctgatctcggtcttctgtctgtcaagaaccgttttgccaagcagccc
tttaaaagtattgttaagattcctcctgttgtggacataatgactgtaagactgacaaac
ctcaaaatgtacaggaccacatatataaatgggggctttcagggagagatacagttgctg
gagcccgtcaacctggacttggaaatccagagaaatctttcctccaactggtaccacagc
atccctgacattgggatcactgctcatcttaaaccaattagtctgatcctgagtcagtct
gacatgacagtgatcctgcgaactctgagtgagaatctgtcagagaactccgatgtcccc
cctccagctcttccatccaccggtgcagcttcctctgatgctgcatcaaacaaagagtca
cagggctccactggaccagccagtagtaacacagtggtgacagctgctgtggtggagacc
cagcaaaacatcaagatgaagaccacgcttaaattagacttcaagtttgactcaatgacg
ctgagcttgtacagccctgatgagaatgtggtgcacctggtggattcacgtgacgagcaa
ctgaagttggcagagtttactctggggacaatctctacctccgttaacaggttctcagat
agctccatgaaggcctctgtccagctcgctacctgccttctggatgacaagagacccaag
atcaagacagtcaccccaaggatgatgggcctgaggcctggagcagaacagaacaagatg
gttgaggtgcactaccgccagggccgtgaaggcatcagtgtggaaacagtggtgcaagat
gtctatctgtgtgccagcatggagttcctgctcacggtcgcagatgtttttcttaaagct
acccaacacggttttgcccaagtgccacaaccaaagacctctgctggagcaggggagaaa
aagcaggtcaactccactgtcacatctaaggagcccaacgtaatgtcaaagacagagatc
agtcttttgctccgtaacccggatatcgtgtttgtggctgacttgacacgtgccgatgcc
cccgccctggtcatgtctacgcagtgcgagttgttaatgaaaagttgtgcagaggggtca
cagatcaccgccgttatcaacgatctaaaggttatggcatgcccctttttatcagagaag
aggaaaaataatatgaccactgtgctgcagccatgtcaggtgttcttccaaagtactcag
accccgacatctccacaggctatggaggtctccatgaatgccctcacactaaaggtatcc
ccactcatcatcaacacggtgatcacaattctttcagtattgagccccgccgcagagacc
ccagaggagcttgatagcccagttcccgtagatctgtgggagaaacgaagttggaaggac
ctaaaattctggttcctagaagagggtggagatgaagacacaaaatcattaactccactg
gtaccccagggggagtcattgcagatgaatattaaatctatctgtctgactctggaagct
ggagtgggacaccgcaccatccccatgcttcttgccaagtcatcgttcaacggagatgtg
aaaaactggtccacattaattaatttacatagcaagcttgacctggaggttcactattac
aatgagatcatgggagtgtgggagccgctgctggagccattagaagatgagacaggagag
ggtttcagaccctggagactggttttaaagatgaaaaagaaaccagtgagtttcccagga
ctgtctgatgaggtggattaccaaatcccagactataaaacagtcattgtcatcagcagt
aaagaccagctcaacatcacactttctaaatgtggactaactatgctcaatcacctgggc
caggcatttgccgaggctgccaaacagacatcagactctttccagaaggaagaggctccg
tttgtagtcaaaaaccgcctgggccttccggtctctgtccgctacagtgaaatgttttct
cccatcggccaacagagcaccacattcactgtggagctacaggatggtgaaacacttggc
atggactattccactaagacagagtctgaccagttctctgcaatgatctcattatccgga
aaggagtactacattcagccaactccaatgggtcacacctcagccagtgtgatccccctg
atcaaggtgggcaaggggatgtacagtgttgtgcacacagagtcaggagtcacctgtttc
ctggtctgtcagatttcctctgtggagggcagcaaatacatcaagatccgctcacctttc
cagatcatcaatcattttcaaattccttttaaagtttttgaaggatccacatgtctgggt
aaagctctccctaatgaagagttctgcgttccactggattcatataggtctgaactgagt
ctacagccagtcctagtagatgacgatcagggtgagcagtttgagtgctcggaaggcttc
agttatgaagatgtcagcatcgagccgcccaccaaacgcctcgagcagacctgccgtcgc
cgtagtggtgagggaggagtgctaatggtcaatatggtgccggttaaggatgctgtgaca
ttcaaacacactggagatgttggagagaactttgatgtaccttttgtggtgcacttgtgg
ccctccatcctgctacggaacctccttccttaccccatctcttacaaactaaaggacagc
ggagtctctgctcctgaggccactctgaacccaggccactctgctcagctgtacactgct
gtcatcaaccagtccagtgttgatctttgtcttctaaactacctgtctcaggactggtct
tctgtgtacagtttcctcagtgaccaagaagaaatcaccttcatagtattccagtctgaa
cgagatcctaatgaagacgacgaaggcccagagatgaagagagccgagttggacatagct
gtgcacgtcaaatatgacctgggacagatggtggttgctattcactcgccttactggatg
gtgaacaagacaagcaggctgctgcagtacaaagctgatgatattcatcgcaaacaccca
ctggactatgacatgcccctgctcttctccttcaagccccgatacttcctgaaaaacaac
aaggttcgtctcatgatctcagacagcgaactgtctgacgaattttctctggatacagtt
ggaagccacggagatgtcaaatgtaaaggccggtacaaagattacctggtcggcgtgaag
attgaagccagcagcttcacgctgacccgcatcgtgacctttgtgccgttttacacgctg
gtcaacaaaactaaggaaagcgtgttcatatgcgaggacgggttggacaactggaccgag
gctcaaccagaagagtcgggtattccattctggcctgagaatgacaccaaacggctcaag
attaaggtggaaggctgcaccctgcctccctgctccatcgatttcacaagacaggaaaac
tgtctgttgctccatatggacaactcttttggcgggatcatcgttgacgtaaacctgttg
gagcactcggccacgatccgattctcggagtaccacgacggtgccgccccgttcctctta
atcaaccacaccaaaggacagactctgcagttctatcagagtgcccggacagactccgcc
tgggttgctaacgacctgctcgacctctccttctcaatggaggaggacagttctcagaag
gaggaagagaaggatgagctggagcctgggaaagctgtgtattacacctgggctgaatcc
actgggtccagagagctgtgttggaagtgtgggacatacagtgggaagctcaagagcgag
gaggatgtgtgtctagacatcaacagtgaaaagaaactgtttgtgctctccttctatgaa
ggtctccagcgtgtggtgctgttcacggaggaccaacacacctacaaactgctctgtgag
agcgagaaggtgcagctggctgagcaggaaatcctcctgtcgctacagaacatgggcgtg
tccctagtcaacaacaacagcagccaggaagtctcctttattgggatcacaagctctgat
gtggtttgggaactgaagccggggaaaaagaaccgttggaagactctgagcacgaaagaa
actgagatgctggagaacagctacaaacactacgtggacactgaacccttggacaacggc
atcgtcaacctggaaaacggctaccaggtgtctttcacaccgaacggtgtggacatgcgg
atgctgcagccgtgcagcgctcccctcaggaggcacttcctgccagcagtgaaggtggaa
tacagcgtgtcaccgcgacagagtgcctaccgtgtccaaatccaccgaattcagatccag
aatcagcttcccggagccatcttcccctatgtgttctaccctgtaaagctacctaaatcc
atcaccatggactcagaacccaaacctcttactgacatcagcatcgtcaccagaacagcc
ggacactctaatatctctcgcattaagtatttcaaggtgttgatccaagagatggacctg
aagctggatcttggcttcctctacgccatactggacctgttctcacccgagaacgccagc
gtcatgagcccggaacaggaggcggagctgtttgagacagatttggaaaacataaagatg
gtcctgaacagtgtctctgccgctgacacctctcccatcagcctctacgagtattttcac
atttcccccatcaagctgcacctgagtctctccctgagcaccggaggggaggacgggatg
aagcaggagcgagacacggagctcattcctgtgcagtcgctcaacctgctgctgaagagc
atcggtgccacgctcacggacgtgcaggacgttgtcttcaagttggccttctttgagttg
aatttccaattttacaccactcagcagctccagtgggaggtgatcagacattattctaag
caggctattaaacagatgtacgtgctggtgcttggcttggacgtacttgggaatcctttt
ggcctgatcagagggctgtcagaaggattcgaagctttcttctatgagccgtatcaggga
gccatccagggacctgaggagtttgttgaaggaatggcacttggggtgaaagctctggtg
ggaggggccgtagggggtatagcgggcgccgcctcccgcatcacaggcgccatggcaaag
ggtgtagcagccataacgatggatgaggaataccagcagaagagacgagaggctatgaac
agacagcccagtggcctcagagaggggctggccaggggtggaaagggactggtgtctggt
tttgtcagtgggatcacagggatcgtcaccaaaccaatcaaaggagcgcagcgggagggc
gcagccggcttcttcaaagggtttggaaaaggtctggtgggtgcagtagccagacccacc
ggaggcatcatcgacatggccagcagtactttccagggaatcaagagggcagcagagacg
tcacaagatgtcgagtccctgcgtccccctcgcttcatccacgaggacggcgtcatacgg
ccatataaggagagggaggggctcggcagtcagatgctccagaaaatcgagaacggacgt
tacgccaagtacaaatattttgcccacgcgaaggtcaatgagtccgacatcctcatgatc
accaagcgtggaatcttttttgtgaccaaaggtacgtttggccagctcacctgtgagtgg
cagtacctgtttgaagagttcaccaaggaccccatgatcgtcgagcaccgccgacttcgc
attgaagccaaagagagagtcaagtccgtcttccacgcaaaagagtttgggaagatcatc
aacttccgaacccccgagatagccaagtgggtcctcgccaaactggacgacgccagagag
aatctgcccaaatag
DBGET
integrated database retrieval system
