Takifugu rubripes (torafugu): 101074911
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Entry
101074911 CDS
T02386
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03013
Nucleocytoplasmic transport
tru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101074911
03015 mRNA surveillance pathway
101074911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101074911
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101074911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_3
Macoilin
PAP1
Motif
Other DBs
NCBI-GeneID:
101074911
NCBI-ProteinID:
XP_011603441
LinkDB
All DBs
Position
1:complement(9290977..9294299)
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AA seq
352 aa
AA seq
DB search
MSISNDLASLQVSTNTAPITRKELFRRRERFLPRRTAIGPPSKAPKKPPREKADTIKVQT
KVSWVVSKAVPQRSTQLELIKFWMAPSPTKKKEEEKNKLRGKEKSAGAKEVADKARGREK
TRTRHSASSGSSRSSSSSSSGSSSGSSSGSSSSSSSSSRSSSSSSSSSSSSPSPSRQRHN
RRRSRSKSKSAKRDDRERRRRSPTPKPTKIHLGRLTRNVIKEHIQEIFSTYGKIKMIDMP
LNRIYPHLSKCYAYVEYETPEEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPP
RRLPPPPPMWRRTPPRMRRRSRSPRRRSPIRRRSRSPGRRRHRSRSSSNSSR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcatctcgaacgatttggcgagcctgcaggttagcaccaatacagcaccgatcacg
aggaaggagttattcaggaggagagagcgctttctcccgaggcggactgccatcggtcct
ccaagcaaggctccgaagaagccccccagggagaaagctgatacaataaaggtccagacg
aaggtcagctgggtggtctccaaagcggtaccccagcgctccacacagctggaattgata
aaattctggatggcgccctccccaacaaagaagaaagaagaggagaaaaataaactgaga
ggaaaagagaagtcggcaggtgcgaaagaagtggctgacaaggcccgaggccgggagaag
actcgcactcgacacagtgcttccagtggtagcagcaggtccagctccagcagcagctca
ggctccagctcaggctcctccagtggctcaagttcttcaagctcttcgagctctcgctcc
tcatcttcctcctcgtcctcatcctcttcctcgcccagcccgagccggcagcgccacaac
aggcgacgctcgcgttccaagtcaaagtcagcaaagagggatgacagagaacggcgacgc
aggagccccacacccaaacccactaagatccacctgggccgcttgaccagaaatgttata
aaggagcacatccaggagatcttctccacttatggtaagatcaagatgatcgacatgcca
ttgaaccgcatctaccctcacctgtccaaatgctatgcgtatgtggagtatgagactccg
gaggaggcggagaaggcgctcaaacacatggatggaggtcagattgacggtcaggagatc
acagtcacggctgtgctcactcccaccgtgcgcccccctccccgtaggctgtccccgcct
cgcaggttacctcccccgccacccatgtggcgacgcaccccaccccgcatgagaagaagg
tctcggtcaccccggcgacgctctccaatccgccgcaggtctcggtctcccggacgccgc
cgtcatcgctcacgatccagctccaactcatctcgctag
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