Takifugu rubripes (torafugu): 101075097
Help
Entry
101075097 CDS
T02386
Symbol
hnrnpu
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U isoform X2
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101075097 (hnrnpu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101075097 (hnrnpu)
Spliceosome [BR:
tru03041
]
Common components
Common spliceosomal components
hnRNP proteins
101075097 (hnrnpu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
Zeta_toxin
CPT
AAA_22
AAA
AAA_18
KTI12
Motif
Other DBs
NCBI-GeneID:
101075097
NCBI-ProteinID:
XP_003971535
Ensembl:
ENSTRUG00000007759
LinkDB
All DBs
Position
16:4173109..4181120
Genome browser
AA seq
807 aa
AA seq
DB search
MSSIDVKKLKVNELKDELKRRNLSDKGLKADLMDRLQAALNEEALASHPDEEAAEDDGFD
QPTEQEVMGEDEDEEEEGPVEESMEANEAEEEQSDNGGAAVGVGVGVGVDEEMVEGEENV
EENVEENVDEDDDMDPMLKADVDDMEKIDADDGDADKDTNADQKNKKGVKRRREEHGRGY
YEFIEENKYSWASFKSPVPPLEEEDEDIDDTKVCLDAYNCDLHFKVSRDRYSASSLTMES
FAYLWSGGKATYGVDKGKACFEMKITEKIPVKHISSKNMDIHDVQVGWSLATGTLLLGEE
ELSFGYSSKGKKTSNCVTEEFGETFEENDVICCLIDFDGDEVVMSYCKNGGEPSTAFQIS
KDSLSGQALFPHIICHNCAVEFNFGQMETPYFPQPEGFTFLQQIPVDDRVRGPRGPQTKA
DCEIIVMVGLPGSGKTTWVKNHVQENPGKYYILSSDTIVDKMMINSLKRQSKDITKLTTI
SQRAPLFLGKFIEIAARKKRNYILDHTNVSAPGQKRKMCLFAGFQRKAVVVCPSEEDYKQ
RVQQKVETDGKEVPEHAILKMKGFYALPEEGESFIEIIYAELQKEEASKLLEQYREESKT
ALPAEKKPNQGSTMPKRGSGQRGGGRGGKNQFGRGSGPGHRGGSRGGFQNRGNYRGGPGP
HCGFSRPPRNFLPPLNIRGGYPGRGNFSRGHMPILGGSPRGGPMRGNMGPRGGHMNRGGP
GHRGNMNRGGGGQMNRGGHRGHPGQYNQRGGNRGNYGNKNGNFNNRNSGNFGGNRNGMDK
AQAFNQSWQQGFWNQKPWSQQYQPGYY
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagctccatcgacgttaaaaaactgaaagttaacgagctgaaggatgagctgaaaagg
cgtaatctgtcggacaaggggctgaaggccgacctgatggaccgcctgcaggccgcgctc
aacgaggaggccctggcctcgcatccggacgaggaggcagcggaggacgacggcttcgac
cagcccaccgagcaagaggttatgggggaggacgaggacgaggaagaggaaggcccggta
gaggagagcatggaagccaacgaggcggaggaggaacagagcgataatggaggcgcagcg
gttggcgtcggcgtcggcgttggcgttgacgaggagatggtcgagggggaggaaaacgtc
gaggaaaacgtcgaggaaaacgtcgatgaagacgatgacatggacccgatgctcaaggca
gacgtcgacgacatggagaaaatagacgcagacgatggggatgcggacaaagacacgaat
gctgatcagaagaataagaagggtgttaagagacgccgggaggaacatggaaggggctac
tatgaatttattgaagaaaacaaatacagctgggcttcatttaagagtcctgttccaccg
ctggaggaagaagatgaggacattgatgacacaaaagtttgcctggatgcatacaactgc
gacctgcattttaaggtgtcccgggatcgttacagtgcctcctctctgacgatggagagt
tttgcctacctctggtctggaggcaaggccacctatggtgtagataaaggcaaagcttgc
tttgagatgaagattacagagaagattcccgtaaagcacatttccagcaagaacatggac
attcatgacgtccaggtcgggtggtccctggctactggcactctgctcctgggtgaggaa
gaattgtccttcggatactccagcaaaggcaaaaagacaagcaactgtgtgacggaggag
tttggagaaacctttgaggagaatgatgtcatctgctgcctcattgactttgacggcgat
gaggtggtgatgtcatactgcaagaacggcggcgagccatccactgcattccagatcagc
aaggacagcctgagtggccaggcccttttcccccacatcatctgtcacaactgtgctgtc
gagttcaactttggacagatggagactccgtacttccctcagcccgaaggcttcaccttc
ctgcagcagatccccgttgacgacagagtccgtggacccaggggccctcagaccaaggcg
gattgtgagatcatagtgatggtcggcctgccgggctcagggaagaccacatgggtgaag
aaccacgtgcaggagaaccctgggaaatactacatcctcagtagtgacaccatcgtggac
aagatgatgatcaacagcctgaagcggcagtccaaagacatcacaaagctgaccaccatc
tcccaacgagcgccgcttttcctgggaaaatttattgaaatcgcagcccgaaagaagagg
aactacattctggatcatactaatgtgtcggccccgggccagaagcggaagatgtgcttg
ttcgccggcttccagcgcaaagctgtggtggtctgtccttctgaggaggactacaagcag
agggtccagcagaaggtggagactgatggcaaagaggtgcccgagcacgccatcctcaaa
atgaaaggcttctatgctcttcccgaggagggggagagcttcattgagatcatctacgca
gagctgcagaaagaggaggcctccaagctgctggagcagtacagggaggagagcaagacc
gctctgcccgccgagaagaagcccaaccagggaagcacgatgcccaagagaggcagcggc
cagcgcggaggcggccgcggaggcaagaaccagtttggacgggggtctggacctggacac
agaggagggtcccgtggaggcttccagaacagaggcaactacagaggaggtccaggcccg
cactgtggtttctcccgcccaccacgcaacttcctgcctccactgaacatcagaggaggc
taccctggacgtggaaacttcagccgtggccacatgcccatcctgggtgggtcgccgagg
ggcggccccatgaggggtaacatgggaccccgaggggggcacatgaacagaggcggtcca
gggcatcgagggaacatgaacagaggaggcggaggccagatgaatcgtggaggacacaga
ggacaccccggccagtacaatcagagaggtggtaaccgcggcaactatggcaacaagaac
ggcaacttcaacaaccgaaacagtggcaactttggcggcaacaggaatggcatggacaag
gcccaagcgttcaaccagagctggcagcaggggttctggaaccagaagccctggagtcag
cagtaccagcctggctattactaa
DBGET
integrated database retrieval system
