Takifugu rubripes (torafugu): 101075179
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Entry
101075179 CDS
T02386
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04510
Focal adhesion
tru04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101075179
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101075179
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
M-factor
Motif
Other DBs
NCBI-GeneID:
101075179
NCBI-ProteinID:
XP_003972809
Ensembl:
ENSTRUG00000015177
LinkDB
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Position
18:complement(3846497..3859722)
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AA seq
1773 aa
AA seq
DB search
MSPVILVLTILALCCSVRALLPELANVCTEGSCYPATGDLLIGRAHRLVASSTCGLRRPE
HFCIVGHLEEETKCFMCDSRDMYEEDSNPNSHTIENVVTTFGPNRFKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSMDRGATWQIYRYFASNCEASFPGVSTGPL
AKVDDIICDPRYSDIEPSTEGEVIFRVLDPAFEIEDPYSLRIQNMLKITNLRVNFTKLNT
LGDNLLDFRDEVTAKYYYSLYDMVVRGNCFCYGHASECQPIHEPPPGKEGMVHGHCVCKH
NTDGVNCERCQDFYNDLPWKPAVGRSTHTCKKCECNQHTTECHFDMAVYMTTGNVSGGVC
DDCKHNTVGRQCEQCAPFYYQHPNRDLRDPNVCEPCNCDPSGSLQGGLCDARTDVVAGLL
SGQCRCKANVEGERCDNCRQGYFGLGRGPDGCLPCTCNPLGTLPRGNPCDSHTGSCFCKR
LVEGYACDQCVAEHWGLSNDMDGCRPCDCDHGGALNNNCDPQSGQCVCREHMFGRRCDQV
ESGFYFIALDHYTYEAEDAKHGPGVKLVHRPYPLDRRPTWTGMGFVNMPEGTYLEFTVDN
IPESMDYDILVRYEPQLPDQWEEVSIQVQRPGESGHCRNSIQSGDQQSISLPPGSRHVLL
LNPVCFEEGLSYTVRLSLPLYSSVRYIQNPYTLIDSLVLIPRLREMDMFDGVEGEGAWDT
FQRYRCLESSHSIIKSPITEICNSYIFSVSALLHKGAMACQCDPQGSLSALCETSGGQCQ
CRPNIRGRNCDSCAPATYQFSPSGCRACECDPRGSVSSFCLETTGQCTCVPGATGRQCSH
CLPGHWGFPQCRPCHCNGHSDYCHPQTGQCQSCRDFTTGHHCERCLDGYHGDPELGSGDH
CRPCMCPDGPQSGRHFSDSCYVLAQRLVCVCSPGYRGPRCDQCAPGHFGNPLVPGGRCVP
CQCNDNIDMHDPQSCDAQTGACIRCLYHTEGYACQHCKAGYYGNAVTQSCRKCMCDSVGT
LPRACSSPEECECNQHSGQCPCKSNVIGQNCDRCAPDTWNITSGTGCQKCNCDPVHSFGS
SCNEVTGQCSCKPGFGGRTCRECRELFWGDPEVKCHACDCDPRGISSEECHRATGQCTCV
EAASGPRCDQCARGYQGQFPACEPCHQCFAVWDVVVGELTNQTRRLEVQIAELQSSGVTA
PYKELISSLEKNAKAVRDIVESNPASAKLEEIKELMHQITGVMSFLTGELNTTEETLLLL
HGDANATEVNLDSLTEGIIQLELSIKDLREQVYNVKNANIQGALDTISTAHAQSTMAESL
VNASTSNPGSTVNQSAASRQATEEKMSSSSKEFDRKHQRNVKKLDKLSEELDQFDLTALS
EQTCGGAAEGDSCSGSHCGGLGCTGEDGGPRCGGEGCKGFVTASKTALKSAKDLDQDILA
AMQEVDKLSSMVWEAKKRANEAKANAMEVLIKSNRSKERVEQSNEQLRDLIKEIRDLLTN
ERANVSVIEAVANEVLALEMPTSVEKLNELTKEIKEKVNALTSVDTILSQSAEDVSAAEV
LLKEAMAASEQASTLNETIEAAQAALDESERAQNVAMDAIQLAQNNTKTTLDLLVSVESE
TATSELKLSNTTGRLLLLEREVGLLRQNSLEVNRLEETAKVISEQAKVNAEEAQKEFDVE
LKNKLEEVEDLVEDKGDMVLQGTRRADKLQQEAKELLAQIREKLQRLEELEKAYESNQQI
MEKKAEELVELEKAARQILEEIGYKVTLYSTCL
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgtaatcctcgttctgacaattttggccctgtgctgttccgtgcgggcgctg
ctgccggagctggcaaatgtgtgcacggagggcagctgctaccccgccacaggtgacctg
ctgatcggccgggcgcaccggctggtcgcctcctccacctgcggcctgaggcgcccggaa
cacttctgcatcgtcgggcacctggaggaggagacaaaatgctttatgtgcgactcccgg
gacatgtatgaggaagacagcaaccccaacagccacacgatcgaaaatgtggtcaccaca
ttcggccccaaccgcttcaaaacctggtggcagtcggagaacggtgtggagaacgtgacc
atccagctggacctggaagccgagtttcatttcacacatcttatcatgaccttcaagact
tttcggcccgctgccatgttgatcgagcgctccatggaccgcggggccacgtggcagatt
taccgctacttcgccagcaactgtgaggcgtccttccccggcgtgtccacggggccgctg
gccaaagtcgacgacatcatctgcgacccccgttactcggacatcgagccgtccacagag
ggggaggtgatatttcgggtgctggaccctgcgttcgagattgaagacccttacagcctg
agaatacagaacatgctgaagatcacaaacctccgggtaaacttcacgaagctcaacacg
ctgggcgacaacctactcgatttccgtgacgaggtgacggcgaaatactactactccctc
tacgacatggtcgtccgtggcaactgcttctgctatggccacgcttccgagtgccagccc
atccacgaacctccgcctggaaaagagggcatggtccatgggcattgtgtctgtaaacac
aataccgacggtgtaaactgcgaacgctgccaggacttctacaacgatctgccatggaaa
ccagcagtggggcgaagcacacacacctgcaaaaagtgtgagtgtaaccaacacaccacg
gagtgccactttgacatggctgtgtacatgacgactggcaacgtgagcggaggcgtgtgc
gatgactgtaaacacaacacggttggacgacagtgcgagcagtgcgcccccttctactat
cagcaccccaaccgagacctgagggaccccaatgtgtgcgagccgtgcaactgtgacccc
agcgggtccctgcagggtggactgtgcgacgcgcggacagacgtggtggccgggctcctt
tcaggccagtgtcggtgcaaagctaacgtggagggagagcgttgcgacaactgcagacaa
ggttactttggattgggacgcgggccggacggctgcctgccatgtacatgtaacccactg
ggcacgttgcctcgagggaacccctgtgactcacacacaggaagctgcttctgcaagcgc
ctcgttgagggatacgcctgcgaccagtgtgtggcggagcactggggcctgtccaatgac
atggacggctgcaggccatgtgactgcgaccacggcggcgctctgaacaataactgtgac
cctcagtcggggcagtgcgtatgccgggagcacatgttcggacgacgctgcgaccaggtg
gagtccggtttctacttcatcgctctggatcattacacctacgaggccgaggacgccaag
cacggacctggggttaagctggtccacagaccttatcctctggatcgcaggcctacctgg
accggtatggggttcgtcaacatgcccgagggaacttacttggagttcaccgtcgacaac
atcccagagtcgatggactacgacatccttgttcgctatgaacctcagttgccagaccag
tgggaggaagtgagcatccaagttcagcgtcctggcgagtcgggtcactgcaggaactcc
atccagagcggagaccagcagtccatctcgctgccgccggggtccaggcacgtgctgctg
ttgaatcccgtgtgcttcgaggaaggtctgagctacacggtccgcctcagcctaccgctc
tactcctccgtcagatacatccagaacccgtacacgctcatcgattcgttggtgctgata
ccccggctaagagagatggacatgttcgacggggtggagggcgagggggcgtgggacacc
ttccagcgctaccggtgtctggaaagcagccacagcatcatcaaaagccccataacggag
atctgtaacagctacatcttcagcgtctcggctctgcttcacaaaggagccatggcatgc
cagtgtgaccctcagggctcgctaagtgcattgtgtgagaccagcggcggccagtgtcag
tgccgacccaacatcaggggcaggaactgcgacagttgcgccccggccacttaccagttc
agcccctccggctgcagagcgtgcgagtgcgacccccgggggtcagtgagctccttctgc
ctcgagacgacgggccagtgcacgtgcgttccgggggctacgggccgccagtgttcgcac
tgcctgccgggtcactggggcttcccccagtgccgaccatgtcactgtaatggccacagc
gactactgccacccccagactggacagtgtcagagctgcagagatttcaccaccggacac
cactgcgagaggtgtctagatggttaccacggtgatccagagttggggtcaggtgatcac
tgccgcccctgcatgtgtcccgacggcccgcaaagtggacgtcacttctccgacagctgt
tatgtcttggctcagcggctggtgtgtgtgtgcagtcccggctacagaggccccaggtgc
gaccagtgcgctccgggtcacttcgggaaccctctggtgcccgggggccgctgcgtgccc
tgccagtgcaacgacaacatcgacatgcacgatccccagtcatgtgatgcccagacgggt
gcctgtatcaggtgcctgtaccacaccgagggctatgcgtgccagcactgcaaagcgggt
tactacgggaacgctgtcactcaaagctgtaggaagtgcatgtgtgactccgttggcacg
ctcccccgggcctgttcgtcccccgaagaatgtgaatgcaaccagcacagcggccagtgt
ccctgcaaatcaaatgtgatcgggcagaactgcgaccgctgcgctccggacacctggaac
atcaccagcgggacgggctgccagaagtgcaactgcgaccccgtccactcttttggatcc
tcctgcaacgaggtcaccggacagtgctcgtgcaaacccggcttcggtggcaggacatgt
cgggaatgcagggagctgttctggggagatccagaggtcaaatgtcatgcttgcgattgc
gacccacgtggaatctccagcgaggagtgccatcgcgccaccggccagtgcacgtgtgtg
gaggcggcgtctggcccacgctgtgaccagtgtgccaggggctaccagggccagttcccc
gcctgtgaaccctgccaccagtgcttcgctgtctgggatgtggttgtcggggagctgacc
aatcagacgcggcgcctggaggtgcagatagccgagctccaaagcagcggcgtgaccgct
ccctataaagagttgatcagcagcctcgagaaaaacgccaaggctgtcagagacattgtt
gagagcaaccctgcctcggcgaagctggaggagataaaagagctgatgcatcagattaca
ggcgtgatgtccttcctgaccggagagctgaacacgacagaagagaccttgctgctcctc
catggtgacgccaacgccaccgaagtaaacctggactcgctgacggagggcatcatccag
cttgaactgagcatcaaagacctgagagagcaggtttacaacgtcaagaacgccaacatt
cagggggccttggacacgatttcaaccgcacacgcgcagtcaacgatggcggagagcctc
gttaacgcttccaccagtaatccaggaagcaccgtgaatcagtcggccgcgtcacgccag
gccacggaggaaaaaatgagcagcagcagcaaagagttcgatcgcaagcaccagagaaac
gtgaagaagctggacaaactgtcagaagagctggatcagttcgacttgacggctctcagc
gaacagacatgcggtggcgcagctgaaggtgatagctgctctggctcccattgtggtggt
ttaggttgtaccggtgaagatggaggacctcggtgcggaggagagggatgcaaaggcttt
gtgacagcgtcgaaaaccgctctaaaatcagccaaagacctggaccaggacatcctagca
gcaatgcaggaggtggacaagctttcctcgatggtgtgggaggccaagaaacgtgcgaat
gaggctaaagctaacgccatggaggtgctgatcaaatccaaccgcagcaaagagagagtg
gaacagagcaacgagcaactgcgagacctcatcaaagagatccgagacctgctcacaaat
gaaagagcgaacgtctcagtgattgaggccgtcgctaacgaggtgttggcccttgagatg
cccacatcagtggaaaagctgaacgagctaaccaaggagatcaaggagaaggtcaacgct
ctgaccagcgtggacacgatcctcagccagagcgccgaagacgtctcggctgctgaggtg
ctgctgaaagaggccatggctgccagtgagcaggcgtcaaccttaaacgagacaatagag
gcggcgcaggcggcgctggacgagagtgaacgggctcagaacgttgccatggacgccatc
caattggcccagaataacaccaagaccacactggacctgctggtctctgtggagtcagag
acggccacgtcagagttgaagctcagtaacaccacaggacgtctgctcctgctggagagg
gaggtgggcctgttaagacagaacagcctggaggtgaaccggctggaagagacggccaaa
gtgatcagcgagcaagccaaagtgaacgcagaggaggcccagaaggagtttgacgtggag
ctgaagaacaagttggaggaggtggaggatctagtggaggacaaaggggatatggtgctg
caggggacgaggagagcagataaacttcagcaggaggccaaagagctgctcgcccagatc
cgcgagaagctgcaaagactcgaagaattggagaaggcctatgagtcgaatcagcaaatc
atggagaagaaggcggaggagctggtggagctggagaaggcggctcgtcagatcctggag
gagatcggctacaaagtgacgctgtacagcacttgtctgtga
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integrated database retrieval system