Takifugu rubripes (torafugu): 101075196
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Entry
101075196 CDS
T02386
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101075196 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tru03400
]
101075196 (msh2)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101075196 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
101075196
NCBI-ProteinID:
XP_003977228
Ensembl:
ENSTRUG00000003914
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All DBs
Position
1:523899..528352
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AA seq
937 aa
AA seq
DB search
MAVQPKHNLSMDSAAESGFVNFVFSLPDKPDTTFRVFDRSDFYTVHGKDAIYAAREVFKT
NGVIKYLGSGSRRLESVVLSKLNFEALARDLLLVRQYRVEVYKNHGKGSKDHDWRVEYKA
SPGNLTQFEEVLFGSGSGSEACAGVVAVRFAAGADGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLEALLVQISPKECLLAQGDGGADGSKLREVVQRGGALVSERKKAEFHSKDLVQDL
NRLLRAKKGQSVSSRTLPELDKQVAVSCLAAVVRFLELLSDESNFGSFSLTSLDLSQYMR
LDNAAVRALNLFQGSPDDSAGTHSLAGLLNKCRTPQGQRLLQQWIKQPLLDRTRIEERLD
LVESLVGDSELRQTCQEDLLRRFPDLHRLSRKFQRHSATLQDCYRVYQAVHHIAALLSAL
DRHAGRHQALMDAVFISPLRDLQSDFGKYQEMIETTLDMNQVEHHEFLIKASFDPALSDL
RSKMDEMEKSMQAVLSSAARELGLEAGKTVKLESNAALGFYLRVTCKEEKVLRNNKKFTM
LDVQKNGVRFTNGKLSSINEDYTKSRAEYEEAQNAIVKEIINIAAGYVDPLQALSDVTAQ
LDAVVSFAVASVSAPVPYVRPELLGEEGGPRRVALLQARHPCMEADADTAFIPNDITFVQ
GQKSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCERAELSVIDSILARVGAGDSQV
KGVSTFMAEMLETAAILRSATANSLIIIDELGRGTSTYDGFGLAWAISQHIAAAIRCFCL
FASHFHELTALAAQQPTVHNLHVTALTSQNTLTMLYRVRPGVCDQSFGIHVAELASFPPA
VVAMAKDKAEELEEFQEAAGGKWEQEEGGEAKRRRLDKQVGEKLIQDFLDKARSLPVSSM
SEDEVKAELRRMKQELVAEGNAYIGDILARCGPVPTA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaaccgaagcacaacctttcgatggactctgcagctgagagcggatttgtg
aacttcgttttctcccttccggacaaaccggacaccaccttccgggtgtttgaccgcagc
gacttctacacggttcacgggaaagacgccatttacgcagcgagggaggttttcaagacg
aacggagtcatcaaatacctgggctcaggtagccgcaggctggagagcgtggtcctgagc
aagctcaacttcgaggccctggccagagacttgctgctggtgaggcagtaccgggtggag
gtctacaagaaccacggcaaaggcagcaaagaccacgactggagggtcgagtacaaggcc
tctcctggaaacctaacccagtttgaggaggttctgtttggtagcgggtctgggtccgag
gcctgcgccggcgtggtggccgtgcgcttcgccgcgggggccgacggccagcgcgtggtc
ggcgtgggctacgtggacgccgcacagaggacgatgggcgtgtgtgagtttccagacaac
gagatcttctcaaacttggaggccctgctggtccaaatcagccccaaagagtgtctcctg
gcccagggcgacggcggcgccgacggcagcaaactgcgagaggtggtccagcgcggcggc
gctttggtctctgagcggaagaaagcagagtttcatagcaaggacctggtccaggacctc
aaccggctgctgcgggccaagaagggacagagcgtgtccagcaggacgctccccgagctg
gacaaacaggtcgccgtctcgtgcctggcggcagtggtgcggttcctggagctgctgtcg
gatgagtccaacttcggctccttcagtctcacgtccctggacctgtcccagtacatgagg
ctggacaacgctgccgtccgggctctgaacctgttccagggatctcctgacgactccgct
ggaactcactcattggccggactcctgaacaagtgccgcacgccgcagggccagaggctg
ctgcagcagtggatcaagcagccgctgctggacagaaccaggatcgaggagaggctggac
ctggtggagagcttggtgggcgactcggagctcaggcagacgtgccaggaggacctgctg
cggcgcttccccgacctccaccgtctctccaggaagttccagcgccacagcgccacgctg
caggactgctaccgcgtctaccaggccgtgcaccacatcgctgccctcctctcagccctg
gaccgacacgcaggacgccaccaggcgctgatggacgccgtcttcatctcccccctcaga
gacctacagagcgactttgggaagtaccaggagatgattgaaaccactctggacatgaac
caggtggagcaccacgagttcctgatcaaagcttcctttgatccggcgttgagtgacctg
agatcaaagatggacgagatggagaagagcatgcaggccgtgctgagcagtgcagccaga
gagctgggtctggaggccggtaagacggtgaagctggagtccaacgccgcgctggggttc
tacctgagagtcacctgcaaggaggagaaggtgctgaggaacaacaagaagttcaccatg
ctggatgttcagaagaacggcgtgcgcttcaccaacgggaaactgagctcgatcaacgag
gactacaccaagagcagggcggagtacgaggaggcccagaacgccatcgtgaaggagatc
atcaacatcgccgcaggctacgtggaccccctgcaggcgctgagtgatgtcacggcccag
ctggacgccgtggtgagcttcgccgtggcgtccgtgtcggccccggtgccctacgtccgg
ccggagctgctgggcgaggagggggggcccagacgcgtggcgctgctgcaggccagacac
ccctgcatggaggcggacgcagacacggccttcatccccaacgacatcaccttcgtccag
ggacagaagagcttctacatcatcacagggccaaatatgggcggcaagtccacgttcatc
cggcaggtgggcgtgatcgccctgatggctcagattggctgcttcgtgccgtgcgagagg
gcggagctgagtgtgattgacagcatcctggcccgggtgggggccggggacagccaggtc
aaaggggtgtccaccttcatggcggagatgctggagacggccgccattctgcgctctgcg
accgccaactcgctcatcatcatcgacgagctgggccgcggcacgtccacctacgacggc
ttcggcctggcctgggccatcagccagcacatcgccgccgccatccgctgcttctgcctg
ttcgcctcgcacttccacgagctgacggcgctggcggcgcagcagcccaccgtgcacaac
ctccacgtgacggcgctgacgtcacagaacacgctgacgatgctctacagagtcagacca
ggcgtctgtgaccagagcttcgggatccacgtggccgagctggcttccttcccccccgcc
gtggttgccatggcaaaagataaggcggaggagctggaggaatttcaggaagctgcagga
gggaagtgggagcaggaggaaggaggtgaagccaagagacggcgcctggacaaacaggtg
ggagagaaactgatccaggacttcctggacaaggccagatcacttcctgtttccagcatg
agtgaagatgaggtgaaggcggagcttcgcagaatgaagcaagagcttgttgccgagggc
aacgcgtacatcggagacatcttggcacgctgtggtcccgtgccgacggcctga
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