KEGG   Takifugu rubripes (torafugu): 101075196
Entry
101075196         CDS       T02386                                 
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101075196 (msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tru03400]
    101075196 (msh2)
DNA repair and recombination proteins [BR:tru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     101075196 (msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27
Other DBs
NCBI-GeneID: 101075196
NCBI-ProteinID: XP_003977228
Ensembl: ENSTRUG00000003914
LinkDB
Position
1:523899..528352
AA seq 937 aa
MAVQPKHNLSMDSAAESGFVNFVFSLPDKPDTTFRVFDRSDFYTVHGKDAIYAAREVFKT
NGVIKYLGSGSRRLESVVLSKLNFEALARDLLLVRQYRVEVYKNHGKGSKDHDWRVEYKA
SPGNLTQFEEVLFGSGSGSEACAGVVAVRFAAGADGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLEALLVQISPKECLLAQGDGGADGSKLREVVQRGGALVSERKKAEFHSKDLVQDL
NRLLRAKKGQSVSSRTLPELDKQVAVSCLAAVVRFLELLSDESNFGSFSLTSLDLSQYMR
LDNAAVRALNLFQGSPDDSAGTHSLAGLLNKCRTPQGQRLLQQWIKQPLLDRTRIEERLD
LVESLVGDSELRQTCQEDLLRRFPDLHRLSRKFQRHSATLQDCYRVYQAVHHIAALLSAL
DRHAGRHQALMDAVFISPLRDLQSDFGKYQEMIETTLDMNQVEHHEFLIKASFDPALSDL
RSKMDEMEKSMQAVLSSAARELGLEAGKTVKLESNAALGFYLRVTCKEEKVLRNNKKFTM
LDVQKNGVRFTNGKLSSINEDYTKSRAEYEEAQNAIVKEIINIAAGYVDPLQALSDVTAQ
LDAVVSFAVASVSAPVPYVRPELLGEEGGPRRVALLQARHPCMEADADTAFIPNDITFVQ
GQKSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCERAELSVIDSILARVGAGDSQV
KGVSTFMAEMLETAAILRSATANSLIIIDELGRGTSTYDGFGLAWAISQHIAAAIRCFCL
FASHFHELTALAAQQPTVHNLHVTALTSQNTLTMLYRVRPGVCDQSFGIHVAELASFPPA
VVAMAKDKAEELEEFQEAAGGKWEQEEGGEAKRRRLDKQVGEKLIQDFLDKARSLPVSSM
SEDEVKAELRRMKQELVAEGNAYIGDILARCGPVPTA
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggcggtgcaaccgaagcacaacctttcgatggactctgcagctgagagcggatttgtg
aacttcgttttctcccttccggacaaaccggacaccaccttccgggtgtttgaccgcagc
gacttctacacggttcacgggaaagacgccatttacgcagcgagggaggttttcaagacg
aacggagtcatcaaatacctgggctcaggtagccgcaggctggagagcgtggtcctgagc
aagctcaacttcgaggccctggccagagacttgctgctggtgaggcagtaccgggtggag
gtctacaagaaccacggcaaaggcagcaaagaccacgactggagggtcgagtacaaggcc
tctcctggaaacctaacccagtttgaggaggttctgtttggtagcgggtctgggtccgag
gcctgcgccggcgtggtggccgtgcgcttcgccgcgggggccgacggccagcgcgtggtc
ggcgtgggctacgtggacgccgcacagaggacgatgggcgtgtgtgagtttccagacaac
gagatcttctcaaacttggaggccctgctggtccaaatcagccccaaagagtgtctcctg
gcccagggcgacggcggcgccgacggcagcaaactgcgagaggtggtccagcgcggcggc
gctttggtctctgagcggaagaaagcagagtttcatagcaaggacctggtccaggacctc
aaccggctgctgcgggccaagaagggacagagcgtgtccagcaggacgctccccgagctg
gacaaacaggtcgccgtctcgtgcctggcggcagtggtgcggttcctggagctgctgtcg
gatgagtccaacttcggctccttcagtctcacgtccctggacctgtcccagtacatgagg
ctggacaacgctgccgtccgggctctgaacctgttccagggatctcctgacgactccgct
ggaactcactcattggccggactcctgaacaagtgccgcacgccgcagggccagaggctg
ctgcagcagtggatcaagcagccgctgctggacagaaccaggatcgaggagaggctggac
ctggtggagagcttggtgggcgactcggagctcaggcagacgtgccaggaggacctgctg
cggcgcttccccgacctccaccgtctctccaggaagttccagcgccacagcgccacgctg
caggactgctaccgcgtctaccaggccgtgcaccacatcgctgccctcctctcagccctg
gaccgacacgcaggacgccaccaggcgctgatggacgccgtcttcatctcccccctcaga
gacctacagagcgactttgggaagtaccaggagatgattgaaaccactctggacatgaac
caggtggagcaccacgagttcctgatcaaagcttcctttgatccggcgttgagtgacctg
agatcaaagatggacgagatggagaagagcatgcaggccgtgctgagcagtgcagccaga
gagctgggtctggaggccggtaagacggtgaagctggagtccaacgccgcgctggggttc
tacctgagagtcacctgcaaggaggagaaggtgctgaggaacaacaagaagttcaccatg
ctggatgttcagaagaacggcgtgcgcttcaccaacgggaaactgagctcgatcaacgag
gactacaccaagagcagggcggagtacgaggaggcccagaacgccatcgtgaaggagatc
atcaacatcgccgcaggctacgtggaccccctgcaggcgctgagtgatgtcacggcccag
ctggacgccgtggtgagcttcgccgtggcgtccgtgtcggccccggtgccctacgtccgg
ccggagctgctgggcgaggagggggggcccagacgcgtggcgctgctgcaggccagacac
ccctgcatggaggcggacgcagacacggccttcatccccaacgacatcaccttcgtccag
ggacagaagagcttctacatcatcacagggccaaatatgggcggcaagtccacgttcatc
cggcaggtgggcgtgatcgccctgatggctcagattggctgcttcgtgccgtgcgagagg
gcggagctgagtgtgattgacagcatcctggcccgggtgggggccggggacagccaggtc
aaaggggtgtccaccttcatggcggagatgctggagacggccgccattctgcgctctgcg
accgccaactcgctcatcatcatcgacgagctgggccgcggcacgtccacctacgacggc
ttcggcctggcctgggccatcagccagcacatcgccgccgccatccgctgcttctgcctg
ttcgcctcgcacttccacgagctgacggcgctggcggcgcagcagcccaccgtgcacaac
ctccacgtgacggcgctgacgtcacagaacacgctgacgatgctctacagagtcagacca
ggcgtctgtgaccagagcttcgggatccacgtggccgagctggcttccttcccccccgcc
gtggttgccatggcaaaagataaggcggaggagctggaggaatttcaggaagctgcagga
gggaagtgggagcaggaggaaggaggtgaagccaagagacggcgcctggacaaacaggtg
ggagagaaactgatccaggacttcctggacaaggccagatcacttcctgtttccagcatg
agtgaagatgaggtgaaggcggagcttcgcagaatgaagcaagagcttgttgccgagggc
aacgcgtacatcggagacatcttggcacgctgtggtcccgtgccgacggcctga

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