KEGG   Takifugu rubripes (torafugu): 101075326
Entry
101075326         CDS       T02386                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101075326 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tru03019]
    101075326 (wdr82)
   03036 Chromosome and associated proteins [BR:tru03036]
    101075326 (wdr82)
Messenger RNA biogenesis [BR:tru03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101075326 (wdr82)
Chromosome and associated proteins [BR:tru03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     101075326 (wdr82)
    COMPASS/SET1 complex (yeast)
     101075326 (wdr82)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_RFWD3 NBCH_WD40 WD_LRWD1 Beta-prop_IFT140_1st Tricorn_2nd Beta-prop_NUP159_NUP214 Beta-prop_SCAP MinC_C MIOS_WD40
Other DBs
NCBI-GeneID: 101075326
NCBI-ProteinID: XP_029682591
Ensembl: ENSTRUG00000013777
LinkDB
Position
19:complement(10246722..10249580)
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSTNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVTSLCMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGIKFSNDGKLILLSTNGAALRILDAFKGVVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPICCLQFNPKYMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctaacggacaatgtgctgcggagcttcagagtcgctaaggtgtttcgtgaaaac
tcagacaaaatcaactgttttgactttagcacgaatggagaaacaattatttctagcagt
gacgacgactcgctagtcttgtatgactgccaagagggaaaacccaagaggaccctctac
agtaaaaagtatggagtggacttaatcaggtacacacatgctgctaacacggtggtctac
agttccaacaaaattgatgatactatccggtacctctcccttcatgacaacaaatatatc
cgctactttcctggacatagcaaaagggtgacgtctctatgcatgtctcctgtggatgac
acatttatttctggctcactggataaaactatcagattgtgggatttaaggtcgcctaac
tgccagggactaatgcaccttcaggggaagccggtgtgttcctttgacccggaaggtctc
atttttgctgctggaatcaattcagaaatggttaaactttatgatttgaggtcgtttgac
aagggtccctttgccaccttcaagcttcagtacgaccggacctgcgagtggacgggaatc
aagttcagtaacgacggcaaactcatcctcctttctaccaacggggcagcccttcgcatc
ttggatgcttttaagggtgtggtgctgcattcctttgggggctacaacaatagtaaaggc
gtaacattggaggcatcctttacaccagattctcagtttgttatgattggctctgaggat
ggaaagatccatgtgtggaacgcagagagtggtatgaaggtggcgttgttagacggtaaa
cacacaggacccatctgctgcctgcagttcaaccccaagtatatgacgtttgcaagtgcc
tgttccaacatggcgttttggctccctacaattgacgactga

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