Takifugu rubripes (torafugu): 101075355
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Entry
101075355 CDS
T02386
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101075355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101075355
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101075355
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101075355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
TRIM_CC
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
FN3_DSCAM-DSCAML_C
zf-RING_5
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
101075355
NCBI-ProteinID:
XP_003961923
Ensembl:
ENSTRUG00000007641
LinkDB
All DBs
Position
1:18423435..18445061
Genome browser
AA seq
669 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASQSGPNSPKETRREGAVPDSRAMTSPGDRVP
CQFCEQDPPQDAVKTCITCEVSYCDECLKATHPNKKPFTGHRLMEPLLDSHLRGIMCAEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHHVAALGDRYDKLKESLESNLNNLIKRTSDLE
SLMGKLIQTCQHVEVNASRQENKLLEECDLLINIIQQRRQIITTKIKEGKAVRLRKLAQQ
IAGCKQCIERSSSLITQADQALKEADHTRFLQTAKSICERVSMATASSQVLLPEINLNDT
FDTFALDFTREKKMLENLDYLTAPNPPVIREELCTASYDTITVHWTSDDEFTVVSYELQY
AIFTCQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTKYIFIVKAINQAGNRSSEPAK
LKTNSQPFRLDPKSAHRKLRVSHDNLTVERDETSAKKSHSQDRFTSHSSYGVTGNVYIDS
GRHYWEALIGGSTWFAVGVAYKSAPRHEWVGKNSASWVLSRCNNSWVARHNSKEMPVEPP
PHLRRLGILLDYDSGSLSFYDAVSSQHLYTFDVAFAQPVCPVFNVWNRCLTILTGLPIPD
HLEGTDYNK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctggagtcggagctgacctgtccaatctgtctggagctatttgaggacccg
ctgctcttgccctgcgctcacagcctttgtttcaactgcgcccaccgcatcctggtgtca
cactgcacgcccagcgagcccatccaatccatcagcgccttccagtgcccgacctgccgc
tatgtcatcaccctcaaccagaggggcctagagggactcaaacgcaacgttacgctgcag
aacatcattgaccgttaccagaaggcatcgcaaagcggacccaactctcccaaagagacg
cgacgcgagggagccgtccccgacagcagagccatgacgtcacccggcgacagggtgccg
tgtcagttctgtgagcaggatcctcctcaggatgccgtgaagacctgcatcacctgcgag
gtgtcctactgcgacgagtgtctcaaggccacccaccccaacaagaagccgttcacgggt
caccgcctcatggagcctctgctggactcccatctgcgggggataatgtgcgcggagcac
gaggacgagaaggtcaacatgtactgtgtgaccgacgaacaattgatctgcgcattgtgc
aagctggttggtcgacacagggaccatcacgtggcggccctcggcgatcgatacgacaaa
ctcaaggaatccttggaatctaacctcaacaatctaatcaagaggaccagtgatttggaa
agtctgatgggtaaacttattcaaacctgccagcacgtcgaggtaaatgcatccagacag
gaaaacaagctgctggaggagtgtgacctgctcatcaacatcatacagcagcgaagacaa
ataataaccaccaaaataaaagaaggaaaggccgtgcggctgaggaagctcgcccagcag
atagccggctgcaagcagtgcatcgagaggtcctcttccctcatcacacaagccgaccag
gcgctcaaggaggcggaccacactcgtttcctccaaactgctaaaagcatctgtgagagg
gtttccatggcaacagcatcttcacaagtgttgttaccagagataaacttgaatgacaca
tttgatacttttgctctggatttcacacgggagaagaaaatgcttgaaaatttagattac
ctcacagcaccgaatcctccagtaatccgcgaggagctgtgcacagcttcgtacgacacc
atcacagttcactggacgtcggacgacgagttcaccgtggtgtcctatgaacttcagtac
gccatcttcacctgccagtccaacgtcgtcagtttgtgcaactctgccgacagctggatg
attgtaccaaacatcaagcagaaccactacactgtgcacgggctccagtgcggaaccaag
tacatctttattgtgaaagccataaaccaggcgggaaaccgcagcagcgaaccagcaaaa
ctcaaaactaacagtcagcccttcaggttggacccaaagtcagctcaccgaaagctgagg
gtgtctcacgacaacctgacggtggagagggacgagacgtcggccaaaaagagccacagt
caggaccgattcacgagccacagcagctacggcgtgacgggaaacgtctacatcgacagc
gggcgccattactgggaagctctgattggaggaagcacatggtttgcagtgggagttgca
tacaagtcggcgccgagacacgagtgggtgggcaaaaactcggcctcctgggtgctgtcc
agatgcaacaactcgtgggtggcgcgccacaacagcaaggagatgcccgtggagcccccg
ccacacctgcgacgcctgggaatattgttggactacgactccggatctctgtctttctac
gacgctgtgagctcgcagcacttgtacacgttcgacgtcgcttttgctcagccggtctgt
cctgtgtttaacgtgtggaacagatgtctgacaatcctcaccggactccccatcccagac
cacttagaggggacagactacaacaagtga
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