Takifugu rubripes (torafugu): 101075422
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Entry
101075422 CDS
T02386
Symbol
jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tru03036
]
101075422 (jmjd1c)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
101075422 (jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
Motif
Other DBs
NCBI-GeneID:
101075422
NCBI-ProteinID:
XP_029694548
LinkDB
All DBs
Position
1:complement(6974827..7091303)
Genome browser
AA seq
2776 aa
AA seq
DB search
MAVEARLELVGKRFLCVGGDEPPEVGDISQWSWRSGVIRAVNHRDSGNPDLTVYVEFDDQ
EWEKREWVKVYEDFQLFLLEYQLVWAKKKEGPGVGGSCGGTGGMIQGTKAKHIQWPALAF
KPVVGKSLLKPVIAVEFLLDRQLDFLTDNSAYQPYQDELDSQNPVLRDNHQLHEEVKCWL
KEQKVQEIFLQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNV
DPSMIQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNNAAHKSGGRPSGTTGNAQSHYTR
ARANSPRPVMTSSGPSPKSSQGILASQQSCQSQQSLQPASQLHSSLSSSGREQKEQHSCR
TSRRKSSDSSVPEEDKDKREETTGRNSKLKAKQAVNKRKRNCEEDEKKAGVKHLRIDITS
DLSESSDSENTHKSTVHFSYSSSLFLSSSSSSSSSSSEPNSENDLKSHSNNTKLNILKKD
DKPLRLQSINISDSATTIDQLSPWVDFQETEQNKKADKETGKMITKEEEELVAVTQITQL
PQQQIPLMCDSLQGSIIRKNIVKGSSESQTPSLTHLHSGSVIDVTDDAQATVHKESSEAV
SALLASQKAESTSPYLPLNLSPVSSPLIPQAPSPSEGSQRADIEAPLQQQVVTGSGVATA
RTVDTMDLASTEVIRLLASDNDNGALKTVIPHHFQHLRQHPHYTSIQNSMTSQFIPCEIK
KMQQPQINMFFSSDEANSKLIPNPSLSTELQNPLKHKLQYASNSQFQSIPITTNIFHSKP
HSGQLDILKPKPNISPEITKHNIPKCSDTSSLPISRLLTKTDTAKPMRSGFKSGSPQPET
SSITACSGSSKNPLIIDKNDTFIVYRDPALVTSHSDNYTSPAISSSHMASYLHPHLRTLH
STSPHSPCLYPSHPHAASHLLASPHASSLPHSHLLPSGVLPAMLSPAASIRGGHPRLDSP
SGLGQLTLPQAATAHQQQFLPGQGPPPHPLLAQTNSGGAGLGLYPILWPYPNGTSSSYSP
SLNLAPTAKWVHPENHVTMNSEVSIRRNTASPWLPQSAGSTADGLVLLSHGPMRPASADA
YQPAVEIGTHTSASLSKASNDIPKETLISQRKEDHTKKKKTLTGKDNSLHHLYTDPLSKA
RLANKKDSVQAADQASTYKEENRQILKESIEVAPFTAKIHRISEPVMDKDRERCRDAGFL
VRTPVLPCQNVKGGHAHGIQSDKSNYFTTLSTTVVNEPSRLYPLKDFSSFYDKMSAGASV
VVGSVGATVSNQGSLSLVYSRCKSSLSKPPPLIRHQSEGGEGLAGKITEQLSHKLTIVQK
QHHTAPNQHHEHIRAMPSLHRAPVFHPPTQHALECKEAIEQEEREQEREQAAYGGCLSPP
TLTPIQPVSYGSSGYKTLAEQQKPPTLLPEFRDVKGHGNTAVLISVSSSVSEDVMTSSAD
DWRGGEILQDKGMPRNKPQAIMASVIVCPSTSIKYESVVGANKLSSINYNDLSQRRVYSS
CKEPEATSVFQPSSKCNDMSAQYKKTGVQGVVGTNSIDSVSVAPYFCKQVKTQFSSAHEE
ILADKTGSYTSSMLNYSPTGEELASTYISSEGSLPPPSPAEISQPSPSLTTTCNLTSVSS
QPYSFSFVHQKKHKATVAAAPSRTNLFAPTTVMAGNSSSVDSAEKIHSSSIHASFTSGES
SSSFLNGSTTPDKSSPLPNGHASGSASSSSGHPINYHKLKKAWLTRHSEEDRNMVVIISS
TTGKMDKDTTTDISNPTAMSEMIKPCTVNLSASTSCEIEMGKEKFDRERQAEEKVGGAEA
RKTPLRRGNKRTYDSGSESCGYDSDASESKTAGRAKRQPKPTYKKKQNDLAKKKGDTVKE
DDDIKPNGIFRSAREKTKLKLASNNGIPRSILKDWRKVKKLKQTGESFLQDDSCCEIGPN
LQKCRECRVIRNKKGEEPVHSPVFCRFYYFRRLSYSKNGVIRIDGFSNPDQFDDEALSLW
DPGVMQNSFLDKTTATYILSFIGDKFCQMVVTENTAAAWVKKDTKLAWKRAVRGVREMCD
ACEVTIFNIHWVCQKCGFVVCLDCFKAKERRSSKDKELYSWLKCVKGQPHDHKHLMPTQV
IPGTVLTELVKTMHTLREKYCMKPYCPCPNKQSFVKKLTTTNGVSQVLQNVLNHSNKLPV
VKSELGSHEKSDQGGMKLETNGGGNTTGNDPGSSPITPPESQSPLHFLADLAEQKSREEK
KENKEAVLLAKSLKEENKGDSLEVLQQCKAASLVANSTEQGSTLRDLLTTTAGKLKLGST
DAGIAFAPVYSPALQTGKGGRTVPNILDDIIASVVENKIPASRQNINSKMSVKHEPLTIA
KAISNSASTVSEEAKSDKKELGIVVTELTDDSTSLYQTIPFCWLNNKQLLWLKDHRNQNN
WKMFRECWKQGQPVLVSGIHKRLNASLWKADSFNQEFADHQGDLFNCKDQVVSNSGIKEF
WDGFEDITKRPKSKDGEPMVYKLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGNLN
LASYLPSFFVRPDLGPRLSCAYGVAASKEQDFGTANLHLEVSDVVSVLVYVGVAKGNGVL
SKTGVLKRLEEEDLDEGFHRRLKDSSETPGALWHIYLNKDMDQMREFLHKLCKEQGLDLS
LDQDPIREQSFYLSRKQRRRLLDEHGVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQVI
NDFVSPEHVAKCFSLTQELRSSKDQVNYEDKLQKNISATGGGGLLSKLSHTVEHIAGIIH
DGESDPRWLRTSCITV
NT seq
8331 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcggctggagctggtcgggaagcggtttctctgtgtcggcggggac
gaaccaccagaagtcggagatatctctcagtggtcatggaggtctggagtcatccgtgct
gttaaccaccgtgacagcggcaatcccgacctgacggtatatgtggagtttgatgatcag
gagtgggagaagagagaatgggtgaaggtctatgaggatttccagctgtttctgctggag
taccagctggtctgggccaaaaagaaggaaggaccaggagtaggaggatcatgtggagga
acaggaggaatgattcaggggaccaaggctaaacacatacagtggcctgctcttgcattt
aagccggtggttgggaagagtctgctgaaacctgttatagcagtggagttcttattagac
cgacaactggatttcctgactgacaactctgcataccaaccatatcaggatgagttggac
agccagaatccagtgttaagagataaccatcagctccatgaagaagtgaagtgttggcta
aaagaacaaaaagtgcaggaaatttttttgcaagggccatattctttgaatggataccgg
gttcgtgtgtacagacaagactcagccacccagtggttcacaggaattataacgcaccat
gacctcttcagtcgaaacatggttgttatgaatgaccaggtgcttgaacctcagaatgtg
gatccatctatgattcagatgacctttcttgatgatgtggtccactccttgctaaaagga
gaaaacattggtattacttccagaagaaggtcacgatccagccagaacaacaacgctgcc
cataagtcaggagggagacccagcgggaccactggcaatgctcagagccattacacacga
gcccgagccaacagcccacgcccagttatgacctcatcagggcctagcccaaaaagttcc
caggggatactggcttcccagcagtcttgtcaatcacagcaaagtctacagcctgcaagt
cagttacacagctcgctcagcagcagtgggcgggagcagaaagaacaacatagctgtcgc
acttctcggaggaagagctctgatagcagtgttccagaggaagacaaggacaagagggaa
gagaccacaggcagaaattccaagttgaaggccaaacaggccgtgaacaaacgcaaacga
aattgtgaggaagatgagaagaaggctggtgtgaaacacctgaggattgacataacttca
gatttgtctgagagcagtgactcagaaaatacacataagagcactgtacatttttcatac
tcctcttccttatttttgtcatcctcatcatcttcgtcatcttcttcctctgaacccaat
tctgaaaatgacctgaagagtcacagcaacaacacaaagctcaacattttgaaaaaagat
gacaaaccgctacgtctgcagagcatcaacatcagtgattccgcaaccaccattgatcaa
ctgtccccatgggtggattttcaggaaacagagcagaataagaaggctgataaagagacg
ggcaaaatgattacaaaggaggaggaggaacttgtggcagtaacacagatcacacagcta
ccacagcaacagattcctttgatgtgtgatagtttgcagggcagcattattagaaagaat
attgtgaaaggttcatccgaatcccaaacaccgtcacttactcacctccacagtggcagt
gtgattgacgtcactgatgatgcccaggcaacagtgcacaaggaaagttcagaggcagtg
tcggcacttcttgcatctcagaaagcggaatccacctcaccatatctcccactcaacctt
tcaccggtttcctcccctctaattccccaagctccctcaccttctgaaggtagccagagg
gcagatattgaagctcctttgcagcaacaggttgttacaggaagtggtgtagcaacagcc
aggactgtagacacgatggatttggcttctactgaggtgataagactgctcgcatctgat
aatgacaacggggccctgaaaactgttattcctcatcattttcaacatctgcgccaacat
ccacactacacctctatccaaaatagcatgacgagccagttcataccttgcgaaataaaa
aaaatgcagcaaccccaaatcaacatgtttttttcatctgatgaagcaaactcaaaattg
attcccaacccaagcttaagcacagagttgcagaacccccttaaacataaactgcagtat
gcaagcaattctcagttccagtcaattcccataacaacaaatatttttcacagcaagccc
cactcaggtcaactcgacatcttaaaacccaaacccaacatctcacccgagattacgaaa
cataacatacccaagtgctctgatacttcctcactgccaattagtcgattgttgacaaaa
accgacacagccaaacctatgcggtctggtttcaagtcaggctcaccacaaccagagaca
agcagcatcactgcgtgcagtggcagctccaaaaaccctctaatcattgataaaaatgac
actttcatcgtttacagggacccagcgctggtcacttctcattcagataactatacatct
cctgccatttcctccagtcatatggcatcttaccttcaccctcacttgcgcaccctccac
tcaacctcacctcactctccctgtctttacccatcccacccccatgctgcctcccatctc
ctcgcttcccctcatgcctcttctctgcctcactctcatcttttgccatccggagttcta
ccagctatgctttcgcctgcagcatcaatccggggggggcaccctcgccttgattctccc
agtgggctgggacagcttacattaccccaagcagctaccgcacaccagcagcagttttta
ccgggtcagggacctcctcctcaccctcttctggcccagactaacagtgggggagcagga
ttaggactgtaccccatcctctggccatatccaaatggaacgtcaagctcttactcccct
agtctcaatttggcccccacagctaagtgggttcatcctgaaaatcatgttaccatgaat
tctgaggtatctatcaggaggaacacagccagtccctggctgccacagtctgctggtagt
actgctgatggtctggttttgttgagtcatggtcccatgcggccagcgagtgctgacgcc
taccagcccgctgtcgaaattggcacacacacaagtgcttcactttcaaaagctagcaat
gacattcccaaagagacgctgatatcccagcggaaagaagatcatacaaaaaaaaaaaaa
accctcactggaaaggacaacagtctacatcacctctacacagaccccctcagcaaggcc
cgactggcaaataaaaaggactcagttcaggcagctgaccaagccagtacatacaaagag
gagaatcggcaaatcttgaaagagagtattgaggttgctccattcactgccaaaatccat
cgcatcagtgagccagtgatggataaggaccgagagagatgtagagatgcaggcttctta
gtccggacgccagttctgccctgccaaaatgtaaagggtggccatgcccatggcattcag
tcagacaaaagcaactatttcaccacactgtccaccactgtggtgaatgagccttcaagg
ctttatcccttaaaagattttagctcattctatgacaaaatgtctgctggtgcttctgta
gtggtgggtagtgttggagccactgtgtctaaccaaggatccctttccctggtatactct
agatgtaaatcttccctctctaagcccccacctctgatcaggcaccaatctgagggaggt
gagggtttagcaggaaaaatcactgagcagcttagccataagctcacaatagtccaaaag
cagcaccatacagcaccaaaccagcatcatgagcatatcagggcaatgccatccctccac
agagcacctgtcttccatccacccacacagcatgctctggaatgcaaagaggcaatagaa
caggaagaaagagaacaagagagggagcaagctgcttatggtggatgcctatcaccaccc
acacttacacccatccagcctgttagctatggatcttctggttacaaaacattagcagag
cagcaaaagccccctacactgttgccagaattcagggatgtcaaaggtcatgggaacact
gctgttctaatatccgtttcctcgtccgtcagtgaggacgttatgacttcatctgcagat
gattggagaggcggagagatacttcaggataaaggaatgccaaggaataaaccccaagcc
ataatggcatcagttattgtgtgtccatccacttcaataaaatatgagagcgttgttggt
gctaacaaattatcttctataaattataatgacctctcccagagaagagtatattcatct
tgtaaagaacctgaagctactagtgttttccagcccagctcaaaatgtaatgacatgtca
gctcaatataaaaagactggtgtgcagggagtggttgggactaattctattgattctgtg
tcagttgcgccatatttttgcaaacaagttaaaactcagtttagctcagcacacgaggag
attttagccgataaaactggaagttacacttccagtatgctaaactactccccaacagga
gaggagttagcctcaacttatatatcttcagaaggttctctgcccccaccaagtccagca
gagatatcacagcccagccctagtctcactacaacatgtaacttgacttctgtctcaagc
cagccttactcattctcctttgtccatcagaagaagcacaaagctactgtagctgcagcc
ccatccagaaccaacctttttgctcccacaactgttatggctggaaattcctcctctgtg
gattcagctgaaaaaattcacagttcctccattcacgcttcattcacttctggggagagt
agtagcagttttttgaatggaagcacaacacctgacaagtccagtcccttgcctaatggt
catgcatctgggtcagcttcatcaagcagtgggcatcctattaactaccacaagttgaag
aaagcctggcttacccggcattcagaagaagataggaatatggtagttatcatcagctca
acgactggtaagatggacaaagacaccaccactgacatcagtaatccaaccgccatgtct
gaaatgatcaaaccatgtacagtcaacctcagtgcttcaacctcatgcgagatagaaatg
ggcaaggaaaaatttgacagagaaagacaagcagaggagaaagtgggaggagcagaagca
agaaaaactcctctgagacgggggaataagcgaacttatgattctggctcagaaagctgt
ggttatgactctgatgccagtgagagcaaaactgcaggtcgagccaagagacagccaaaa
ccaacctacaagaagaaacagaatgacttggccaagaagaaaggagacactgtgaaggaa
gatgatgatataaagcccaatggcatcttcagatcagcccgggagaagactaaacttaag
cttgccagcaacaatggaatccctcgttctatcctgaaggactggagaaaagttaagaag
ctaaaacagacaggggagtcattcctgcaggatgactcatgctgtgaaattggacctaat
ctccagaaatgtcgggagtgtagagtgatccgtaacaagaagggggaggagccagtccat
tcccctgtcttctgtcgcttctattatttcagacgcctttcctatagtaaaaatggagta
atccggatagatggtttctccaatccagaccagtttgatgatgaagctctttctctgtgg
gatcctggggtgatgcagaatagcttcctggacaaaaccaccgccacttatatcctcagc
ttcattggagacaagttctgccaaatggtggtcaccgagaacacggcagcagcttgggtc
aagaaggacactaagctggcatggaaacgtgcagttcgaggggtgagggagatgtgtgat
gcctgtgaggtgacaatctttaacatccactgggtctgtcagaaatgtggttttgttgtt
tgcttggattgcttcaaagccaaggaaaggaggagctccaaagataaggaactctacagt
tggttgaagtgtgtgaaaggtcaaccccatgatcacaaacacttgatgccaacacaggtc
attcctggtacagtactgacagagctcgtgaaaacaatgcacactttgagggaaaaatat
tgtatgaaaccctactgtccttgccccaacaaacaaagctttgtcaaaaaactgacaacc
actaatggagtctctcaggttcttcaaaatgtcttaaaccatagtaacaaactgcctgtg
gttaaatctgagctggggtctcacgagaaatcagaccaaggtggaatgaaactagagacc
aatggtggaggaaacactacaggtaatgatcccggaagttcccccattacccctccagag
tcccagtcacctttgcacttcctggctgatctagcagagcagaaatccagggaagaaaag
aaagaaaataaagaggcagtgctgctagctaaaagtttaaaggaagagaacaaaggtgac
agcctggaggtcctacagcagtgtaaagctgcctcactggtggccaacagtacagagcag
ggctccactcttagagatttactcaccacgacagcaggaaagcttaagctaggttcaacc
gatgccggaattgcttttgcacctgtctactcaccagcattacagactggaaaaggtggg
cgaaccgtgcccaacatacttgatgacatcattgcttcagttgtcgagaacaaaatacct
gccagccgccagaacatcaacagcaagatgtcagtcaaacatgaacctctgaccattgca
aaagccatcagcaactctgcctccacagttagtgaagaggcaaaatctgacaagaaggaa
cttgggatagttgttacagagttgactgatgattcaaccagtctctatcaaactattcct
ttctgctggttgaacaacaaacagttattgtggcttaaagatcaccgcaaccagaacaac
tggaagatgtttagagagtgctggaagcaaggacagcctgtgttggtttcagggatccat
aagcgtctgaatgctagtctgtggaaagcagattcctttaaccaagagtttgcagaccac
caaggagaccttttcaactgcaaagaccaggtcgtgtccaactctgggataaaagagttc
tgggatggatttgaggatatcactaagcgaccaaagtccaaggatggggaacctatggtt
tacaagctgaaagactggccatctggagaggagttcatggccctcatgccctcgagatat
gatgacctaatgaagaacctgcctttgccagaatactcagatccagaaggcaatctcaat
ttggcctcttacctgccatctttctttgtaaggccagacttgggaccaagactgagctgt
gcctatggtgttgcagcatctaaggagcaggactttgggactgccaacctacaccttgag
gtctctgatgttgtgtctgtcctggtatatgttggagtggccaaaggaaatggagtcttg
tcaaaaactggagttttaaaacgtttggaggaggaggatctagacgaggggtttcacaga
agattgaaagactcaagtgagacaccaggggcattgtggcacatatacctaaacaaagac
atggaccaaatgcgagaattcctgcacaagctttgtaaggaacagggattggacttatct
ttggaccaggacccaatcagagagcagagcttttacttgagcagaaagcagcgtcggcgg
ctgctagatgagcatggagttcagggctggactgttgtccagttcttaggagactcagtg
ctgatacctgcaggggccatgcatcaggtacagaacctccacagctgtgttcaggtcatt
aatgactttgtgtctccggaacacgtggccaaatgcttctctctcacccaggaacttcgg
tccagcaaggaccaagtcaactatgaggataaactccagaaaaatatatctgccacagga
ggaggaggcttactgtccaaattgtcacatacagtcgagcacatagcaggaatcatccat
gatggagagagcgaccccagatggttaagaacatcttgtatcactgtgtga
DBGET
integrated database retrieval system
