KEGG   Takifugu rubripes (torafugu): 101075526
Entry
101075526         CDS       T02386                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru00565  Ether lipid metabolism
tru01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tru00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    101075526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tru03036]
    101075526
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tru04147]
    101075526
Chromosome and associated proteins [BR:tru03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    101075526
Exosome [BR:tru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101075526
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_SCAP NBCH_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_DCAF4 WD40_RFWD3 LisH LisH_PAC1 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_IFT140_1st eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc DUF2570 ARMC9_LisH SutA-RBD LisH_2 DUF7800
Other DBs
NCBI-GeneID: 101075526
NCBI-ProteinID: XP_011606739
Ensembl: ENSTRUG00000015825
UniProt: A0A674N3A0
LinkDB
Position
11:7578044..7596672
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVSQKRDPKEWIPRPPERYALSGHRSPVTHVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLASCSADMTIKLWDFQ
SFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGFE
SKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGRFIVTCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacaacggcaacgagatgaactaaatcgggcgatagctgattatctacgt
tccaatggatatgaagaggcatattccactttcaagaaggaggctgaattggataataat
gaagaattggataaaaagtatgctggtcttttggaaaagaaatggacttcagtcatcagg
ttacaaaaaaaggtaatggaacttgaatctaaactaaatgaagctaaagaggagatcacc
ctcggtgggcccgttagtcagaaacgagatcctaaagagtggatcccacgcccacctgaa
cggtatgcattgagcggccaccgtagtccagtcacacatgtcatcttccacccagtcttc
agtgtaatggtttcagcttccgaggatgcaacaataaaggtctgggactatgaaacggga
gactttgaacgcacgctgaagggccacacagactctgttcaggacatctcttttgatcta
actggcaaactactagcatcgtgctctgcagacatgaccatcaagctgtgggatttccaa
agctttgagtgcatccgaaccatgcatggacatgaccacaatgtttcatctgttgccatc
atgccaaatggagatcacattatttctgcttcaagggacaaaaccatgaaaatgtgggaa
gtggcaactggctactgtgtgaagaccttcacaggccacagggagtgggtccgcatggtg
cggcccaaccaggacggcacacttattgccagttgctccaatgaccagactgtgcgagtg
tgggttgtggcttccaaagagtgcaaagctgagcttcgggaacacgaacatgtggtggag
tgcatttcctgggcaccagagagtgctcatcccaccatcctagaggccacaggctttgag
agcaagaagagtggtaaaccaggccccttcctcctctctggctccagagacaaaactatc
aagatgtgggatgttagcactgggatgtgccttatgacactggttggccatgacaattgg
gtaaggggtgtcctgttccaccctggcggcaggtttattgtgacatgtgcagatgataag
accttaaggatctgggattacaagaacaagcgttgcatgaaaaccctgtgtgcccacgaa
cactttgttacctctctggattttcacaagactgcgccctacgtggtcaccggaagcgta
gatcaaacagttaaagtgtgggagtgccgttga

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