Takifugu rubripes (torafugu): 101075553
Help
Entry
101075553 CDS
T02386
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X3
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tru03009
]
101075553 (ddx21)
03036 Chromosome and associated proteins [BR:
tru03036
]
101075553 (ddx21)
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101075553 (ddx21)
Ribosome biogenesis [BR:
tru03009
]
Eukaryotic type
Pre-60S particles
Helicases
101075553 (ddx21)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101075553 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
tify
Motif
Other DBs
NCBI-GeneID:
101075553
NCBI-ProteinID:
XP_003976441
Ensembl:
ENSTRUG00000017570
LinkDB
All DBs
Position
6:6806..14877
Genome browser
AA seq
744 aa
AA seq
DB search
MPSKVFFETEDQVMEEVVDIAADVKTLKNKSKDGMKLKKKQKTKEQMEQEDQDCEPPAAK
KKKKNDKVTVDQENDHTDMDGNSSVETSPKKTKKNNGENTEKNTQKQKKTVSAEATNGLS
NGKTPFETPSQTPSQTPSQSPSQSSEESASDSEKEMETPEQREGAFSNFRISPVTINKLK
ARGVSYLFDIQVKTFDSVYDGEDVIAQARTGTGKTFSFAIPLVEKLQRDSAGPARGRAPK
VLVLTPTRELAIQVAKDFKDIIKKLSIVCFYGGTSYMPQIDAIRNGIDILVGTPGRIKDH
LQNNKLDLSKLKHVVLDEVDQMLDMGFAEQVEEILASSYKKDADTNPQTLLFSATCPPWV
YDVAKKYMRPKCKHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRTI
VFCETKKEANELSMNASIKQSTQSLHGDIPQKQRETTLKGFRNGSFEVLVATNVAARGLD
IPEVDLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRR
VGVPTANDIIKSSSKDAVRFLDSIPVAAIGYFRASAEKLIEERGAVDALAAALAHISGAT
ALEQRSLLNSDAGYTTLQLTCSLEMHNIGYAWKSLKEQLGEEIETHIHRMTFLKGRMGVC
FDVPADKVKEIQENWKDGRRWQLTVATELPELEVKEFTNGFGRGGGGRGGRGGFRGGRGR
SFGGFRNGNNRGGQRRSFSQAFDY
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaaagtattctttgaaacagaagatcaagtcatggaagaagttgtggacata
gccgcggacgtcaaaactctgaagaacaagagcaaagatggcatgaagctgaagaagaaa
cagaagaccaaggaacaaatggagcaggaggaccaagactgtgaaccaccagcagccaaa
aaaaagaaaaaaaacgacaaggtgacagtggaccaagagaatgaccacacagacatggat
gggaacagtagtgttgaaacatcaccaaagaagactaagaagaacaatggagaaaacaca
gagaagaatacacaaaagcaaaagaaaacagtatcggcagaagcaacgaatgggctttct
aatggaaagaccccctttgagacgccatcccagacgccatcccagacaccatcccagtca
ccatcccagtcgagtgaagaatcagccagtgacagtgagaaggaaatggagacaccagag
cagagagaaggagccttttccaactttagaatctccccagttacaatcaacaaactcaaa
gctcggggagtctcctacctgtttgacattcaggtaaagacatttgactccgtgtatgat
ggcgaggatgtaattgcccaggcccgaacaggaacagggaagacattctcctttgccatt
cctttagtggagaaactccagagagattcagcagggcctgcccgaggccgggccccaaag
gtcctggtcttaactccaactagagagctggccatccaggtcgccaaagacttcaaagac
atcatcaagaaattgagtatagtttgcttctatggcggcacctcgtacatgccccagatt
gatgcaatccgcaatggaattgacatcttggtcggaactcctgggcgcatcaaagaccac
cttcaaaataataaattggacctctctaaactgaaacatgtggttctggatgaagtagat
caaatgttggacatgggatttgcagaacaggtggaagagattttggcttcatcctataag
aaagatgctgataccaatccacagacgctgctgttttcagccacatgtccaccctgggtt
tatgatgtggccaagaaatacatgaggccaaagtgtaagcatgttgatttgattggcaag
aaaacacagaaagctgcaacaactgtcgagcacctggccatagcgtgccactggtcccag
cgtgccgctgtgataggtgacgtgatccaggtgtacagcggcagccacggcagaaccatt
gtcttctgtgaaacaaagaaggaagccaatgaactctccatgaatgcatcaattaaacag
agtacccagtccctccatggagacattcctcagaaacagagagagaccacactgaaaggc
ttcaggaatggctcttttgaggttctggtggccaccaatgtggcagctcgtggtttggac
atcccagaagttgatctggtggtccagtgttctccaccaaaggatgtggagtcttacatc
catcgctcaggtcgtacaggccgagcaggtaggactggagtctgcatctgtttctaccag
aggaaagaggaggaccagctccgctatgtggaaaacaaagctggcatcactttcagacgt
gttggtgttcccactgccaatgacatcatcaagtcatcaagcaaagatgccgtcaggttt
ctcgactctattccggttgcagctattggttactttcgagcatcagctgagaagctgatt
gaagaaaggggagcagtcgacgctctcgctgctgctctggctcatatctctggagcgaca
gcactcgagcagagatcgctgctcaactctgatgcaggttacaccactctgcagttgacg
tgttctctggagatgcataatatagggtacgcatggaaaagcctgaaagagcagcttgga
gaggagatagaaacccacattcacaggatgacgttccttaaaggcagaatgggagtttgt
tttgatgttcctgccgacaaagtcaaggaaattcaggagaattggaaggatggccgccgg
tggcaactgactgttgccacagagctccctgaactggaggtaaaagagttcactaatggt
tttggaagaggtggaggaggacgaggaggacgtggcggtttcagaggcggaagaggacga
agttttgggggcttcaggaatggaaacaacagaggggggcagagacgcagtttcagtcag
gcatttgattattaa
DBGET
integrated database retrieval system
