Takifugu rubripes (torafugu): 101075606
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Entry
101075606 CDS
T02386
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101075606 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101075606 (tgfbrap1)
Membrane trafficking [BR:
tru04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101075606 (tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
DUF7742
MEIOC
Motif
Other DBs
NCBI-GeneID:
101075606
NCBI-ProteinID:
XP_011608399
Ensembl:
ENSTRUG00000017203
UniProt:
H2V4D9
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Position
13:complement(16693386..16701016)
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AA seq
872 aa
AA seq
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MSVKAFELVPAVERDLLMGEKARINIECIECCGKHLYLGTNDCFIHHFLLDEVTTSKGKL
RYSAQKLLHKYLGLKKAVAELRAASALERLIVLCDGVLFLVNMVTLETVPSAAGGGAKIR
GVTTFCINENPVNGDPFCVEMGVLSSKRRTVQIFMVYEDRVQLIKEVNTPEQPCAVCLDG
YFLCLALTTQYMILNYNTGASQDLFPYNSEERRPIVKRIGREEFLLAAPGGLGMFANAEG
ASQRAPVNWSESVMGAAVCFPYVVALDESFITVHSMLDQQLKQTLSFRDGHILQDFEGKV
LLASTKSVYVLVPLPLEKQIQDLLANHRVEEALVLTEGAQRNIPKDKFQILHKRILQQAG
FIQFGILQFQEAKEYFRKGQLDVRELISLYPLLLPASSSFTRCHPPLHEFADLNHLAQGD
QEKVQRCKQFLIGYLREVRSTEVANGCREDVDTALLKLYAEQDQDCLLDLLSSNNACLLA
DSVPWLERYHKYFALGLLYRSNGQEAAALQLWIRVVDGDLHDATKSDLYDYIVNFLRSCS
CLDLVWKYADWALQKDAARGVSIFTKRTCTKDQSPLNPDDVIKYLGKHSQALLLYLEHLV
LEKKAQKEKFHTHLAVLYLEKVLSSLSASPPNEEQLSSAREKLQGMLRESNLYRVQYLLG
KMENCEQLLLERAILHGKLEEHDKALHILVHQLRDFPSAEAFCMWAASGRDSSYQERLFH
QLLGVYLAGPETAEGDGSGDLKMAAVDLLNRHGEVFDAVRVLQLLPEEWSLQLLRPFLAR
ALRASMHASRVSQIALGLSRSENLQLLHDRLKERKKPVFVSERKGCHLCHNTFSEPDVVC
LPGAVPVHIHCVAQRVKDSATKKQLCNSSNHT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaggcttttgagctggtccccgctgtggagcgagatctcctcatgggcgag
aaggctcgcatcaacatcgagtgcatcgaatgctgtgggaaacatttgtatttgggcacc
aatgactgcttcattcaccacttcctgctggacgaggtcaccacctccaaaggaaagctg
cgttactcagctcagaagttgctgcacaaatacctgggcctgaagaaagccgtcgcagag
ctgagggctgcttctgctctggagcgactgatcgtgctctgcgacggagtcctcttcctc
gtcaacatggtaacgctggagaccgtgccctccgcggcagggggcggggccaaaatccga
ggcgtgactaccttctgcattaacgagaacccggtgaacggcgatccgttctgcgtggag
atgggcgtgctctcctccaaacgccggaccgtgcagattttcatggtgtacgaggacaga
gtgcagctgatcaaagaggtgaacactcccgagcagccctgcgccgtatgtctggatggc
tacttcttgtgcctggcccttacgacacagtacatgatactgaactacaacacaggagcc
tcccaggacctcttcccttacaacagcgaggagaggaggcccattgtgaagagaatcggc
cgagaggagttcctcttagcggcacccggtggtctcggaatgtttgccaatgcagaagga
gcctctcagcgggccccggtcaactggtcagagagcgtgatgggtgctgctgtgtgtttt
ccgtacgtggtggctctggatgagagcttcatcaccgttcacagcatgttggaccagcag
ctaaaacaaaccctttccttcagggatgggcacatcctgcaagactttgaaggaaaggtt
ctcctggcttccaccaagtctgtgtatgtgttggtaccgctgccactggagaaacaaatc
caggacttgctggctaatcacagggtggaggaagcactcgtcctcacagagggagcacaa
agaaatatccccaaagacaagttccagattttgcacaaaagaatcctgcagcaggcaggt
ttcatacagttcggcatacttcagtttcaggaagcaaaagagtactttaggaagggtcag
ctggacgtacgggagctgatctctctctacccactgttgctgccggcttcctcctccttc
acgcgctgccatcctcctctccacgagtttgccgatcttaaccacctggctcagggcgac
caggagaaggtgcagcgatgcaaacagttcctcatcggttatctgagagaggtacgaagc
acagaagtagcaaatggttgtagagaggacgtggacacggcgctcttgaagctgtacgct
gagcaggatcaagactgcctactcgatctcttatcttcaaacaacgcctgcctcctcgct
gacagcgtcccgtggttggagagataccacaagtattttgcgcttgggctgctctaccgc
tccaacgggcaggaagcggcagcactgcagttgtggatccgcgtggtggacggagatctg
catgacgctactaaatctgacctttatgactacatagtgaacttcctgcgttcctgctca
tgtctggacctggtgtggaagtatgcagactgggccttgcagaaagatgcggctagaggt
gtcagcatcttcaccaagaggacgtgcactaaagatcagtccccgttaaaccccgacgat
gtcatcaagtacttgggaaaacacagccaggcgctgcttctgtatttggaacatttggtg
ctggagaaaaaggcgcagaaagagaaattccacacacacctcgctgttttatacctggag
aaggttctgtcgtcgttgtcggcatcgccgccgaatgaggagcagctgtctagcgcgaga
gagaagctccaagggatgttgcgggagtccaatctgtaccgagtccagtatcttttaggt
aagatggagaactgtgaacaactgctgctagagcgtgcaatactacacgggaagctggag
gagcatgataaagcgctgcatatactggtgcaccagcttagagacttcccttctgctgag
gccttctgtatgtgggctgcctctggacgggattcttcttatcaggagaggttatttcac
cagctcctgggggtgtatttagccgggcccgagacagcggagggagacggcagcggagac
ctgaagatggcagcagtggacctcctaaatagacacggagaggttttcgatgcagtcaga
gtcctgcagctgctccccgaggaatggtccctgcagctccttcgacccttcctggcccga
gccctcagggcgagcatgcacgccagtcgtgtgtcccagattgctttggggttatcccgc
tccgaaaacctgcagctgctgcacgacaggctaaaagagaggaaaaaacccgtttttgtg
tctgagaggaagggatgtcacctgtgtcacaacaccttcagcgagcctgacgtggtgtgt
ctgcctggggccgtgcctgtccacatccactgtgtcgcccagagggtgaaagactctgcg
acaaagaaacagttatgtaatagcagtaaccacacgtga
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