Takifugu rubripes (torafugu): 101075838
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Entry
101075838 CDS
T02386
Name
(RefSeq) TATA box-binding protein-like protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101075838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101075838
03021 Transcription machinery [BR:
tru03021
]
101075838
Transcription factors [BR:
tru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
101075838
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101075838
RNA polymerase III system
TFIIIB
101075838
RNA polymerase I system
SL1/TIF-1B
101075838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
101075838
NCBI-ProteinID:
XP_003971705
Ensembl:
ENSTRUG00000003677
UniProt:
A0A3B5JWV5
LinkDB
All DBs
Position
16:complement(7852416..7854861)
Genome browser
AA seq
185 aa
AA seq
DB search
MESNNEGELDVIICNVVATFRTGCRLNLHTIGSKGKNVIYNTRRGKVTMQLRKPRITASI
WASGKVICIGASSEDEAKLGARRIARCLQKLGFKVKFSAFKVVNVMAGCSMPFKISLIDF
TKKNRPIATYEPELYPAAMYTMRQPKATIKVFSTGSVTILAPSVVNVAAAVQHVYPLLSE
CRRPL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaacaatgagggagaactcgacgtcataatctgcaacgtggtggcaactttc
aggaccgggtgtcgtctcaacctgcacaccatcggctccaaaggaaagaatgtcatctat
aacacaagacgggggaaagtcacgatgcaactgcgcaagcccaggataacagccagtatc
tgggcttctggaaaggtgatctgcataggagcatcaagtgaggatgaagcaaagctgggt
gctcgcaggatagctcgctgtctgcagaaactgggcttcaaggtgaagttttctgctttc
aaagttgtgaacgtgatggccgggtgttccatgccatttaaaatctccctaatagacttc
acaaagaagaaccgacccattgccacgtatgaaccagagctctatcctgctgctatgtac
accatgagacaacccaaggctacaataaaggtgttctctactggcagtgtcacaatttta
gcaccaagcgtggtcaacgtggccgcagctgttcagcacgtctaccctctgctgtcagag
tgtcgtagacccctgtga
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