Takifugu rubripes (torafugu): 101075862
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Entry
101075862 CDS
T02386
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101075862 (taf1b)
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
101075862 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
101075862
NCBI-ProteinID:
XP_011616932
Ensembl:
ENSTRUG00000007945
LinkDB
All DBs
Position
16:complement(2629089..2633176)
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AA seq
554 aa
AA seq
DB search
MDAQDTAGYSEACAQCSAVDWGVSDEGRFYCKTCHNVIERTQDVQDTSFTPGSSRISTFG
TGRKSSRTECGREWMICEGFQFILRNQANALLRLGVGDYFKDHVLCEMWRLYLQKSRQAY
THKPVRISHYKLHTDSSSTEMSSRSFVTESDGETSGSNQVVSTDHSCIVSACSNSDEDVS
HLSARRGRSQSLMSMSKTLALVHLALVWSREALTLSDLLRLVNKGHVPYVNAYEQLPDEM
NIKGKDALIFRVESVPSHTAIHREAETLLSFLQLPAFPPVTGQTLLHPVRLSLRYLIDSN
LPVELHPLLCRLIERTGMMDPKLHTCGCSAHPAVPLYDVQTAALIIVTMKLLFGLNDQTE
WDLSSQTIEHQHAGDQFSLRRWYRLLQGVLIRAQNRQKVDVMRKQWKGDKPLHLDKKDRR
VVMKKKRTAQQLRVCYEKLSSQRAAVQHVSPCSFRFCWGDQYEADGPSFHQKKLGGILSL
PLDTDTLRNSWYWHPALKRCKPRTCRSHYEEVEATLPQTFKWFLKLFCFLLDIKPACLYE
EVLKVEHRLFTNHT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggacgcacaagacacggcaggatactcagaagcctgtgctcagtgttcggcggtggat
tggggagtttcagacgagggtcggttctactgcaagacctgccacaatgtcatcgagaga
acccaagatgtgcaggacaccagcttcactcctggctccagcaggatctctacatttggc
acaggaagaaaaagttcgagaacagaatgtggccgagagtggatgatctgtgaagggttc
cagttcatcctgaggaaccaggctaatgcgcttctcagactaggagttggtgactacttc
aaggatcatgtgttatgtgagatgtggagactttatttgcagaaaagtcgacaggcctac
acccacaaaccagttagaatctcccactataaactgcacactgactcaagctcaacagaa
atgtcttcaaggtcatttgtcactgaatctgacggagagacttctggatctaaccaagtt
gtttccacagaccactcctgtattgtgtcggcatgctccaactctgatgaagacgtcagt
cacctgtcagctcgtagagggcggagccagagtttgatgagcatgagcaagactcttgct
ctggtccacttggctctggtctggagccgtgaagctctgactctcagtgacctcctcagg
ttggtgaataaaggtcacgttccatatgtgaatgcatatgagcaacttccagatgagatg
aacataaagggcaaagatgcattaatcttcagagtggagagcgtgccgtcccacactgcc
attcacagggaggcagagactctgctttcattccttcaacttcctgcttttcctccagtc
actggccagactctgctgcatcccgtcaggctcagtctgcggtacctgattgacagcaat
ttgccagttgagctccatccattgctgtgcaggctgatcgagcgcactggaatgatggat
ccaaaacttcatacatgtggctgctcagctcatcctgctgtcccgctctatgatgtgcag
accgccgccctcatcatcgtcaccatgaagctcctgtttgggctcaatgaccaaactgaa
tgggatttatccagtcaaacgattgaacaccaacatgcaggagaccagttcagtcttagg
aggtggtaccggctgctgcaaggggttcttatccgagctcaaaacagacaaaaggttgat
gttatgaggaaacagtggaaaggggacaaacctctgcaccttgacaagaaggacaggcgt
gttgtgatgaagaaaaagagaacagctcagcagctacgagtgtgttatgagaagctgtct
tctcagcgagcagcagtccagcacgtcagtccgtgcagtttcaggttctgctggggggat
cagtatgaagcagatggtcccagtttccaccagaagaagttgggtggaatcttgtcccta
cctctagacaccgacactctcaggaactcttggtactggcacccagcactgaaacgttgc
aaacccaggacctgtcggagtcactatgaggaggtggaggccacactgccacaaaccttc
aagtggttccttaagctcttctgcttcctgttggacatcaaaccagcatgtctgtatgaa
gaagtgctgaaggtggaacaccgcctgttcactaaccacacgtga
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