Takifugu rubripes (torafugu): 101076050
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Entry
101076050 CDS
T02386
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101076050 (trim71)
04121 Ubiquitin system [BR:
tru04121
]
101076050 (trim71)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101076050 (trim71)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101076050 (trim71)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101076050 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
TEN_NHL
zf-B_box_Trim66
zf-RING_5
zf-C3HC4
zf-RING_2
Prok-RING_4
Invasin_D3
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
101076050
NCBI-ProteinID:
XP_003969064
Ensembl:
ENSTRUG00000013387
LinkDB
All DBs
Position
12:complement(5407550..5429513)
Genome browser
AA seq
831 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSTSSHTSLSSSQTNRRLHVLPCLHAFCR
QCLEGQRSPGDPLKLRCPTCDQNVSISEAGVDSLPSSNFLFSNLLDVVVSSEDSIHNKNG
HLHHRGGIVGGSSGFHHSQLGLLHPPHLGEPQCSSCDEENPATSHCLDCQEYLCDNCVRA
HQRVRLTKDHFIECLGENFHLGRLNSNSNSGQPGVALSLAQSLQNNFALLSLFQDRMSFC
QHHENEVFLFFCESCSVPICRECSMGRHMGHTFVYLQDAVQDCRAITIQLLAEAQQGRQA
VQMSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKSLY
LQVEKLHQSLTKLDSTIAAVSQVLDEGRHLDLLLARERMLTQIHELKTLRGLLQPQEDDR
FMFTPPDQALYIALQSMGLISSGAFAPVTKAHGEGLKSALRGKAATFTVIGYDHDGEPRL
SGGDAVSAIIMSVPDGSLSAAEVTDHQNGSYTVGYLPKCEGEHLVSVLVCNQHIQGSPFK
VTVKSGRSYSSLGSKVSAFGCEGEGDGQLCRPWGVCVDREGYVVVADRSNNRIQIFKPCG
AFHHKFGSLGSRPGQFDRPAGVACDSQRRVIVADKDNHRVQVFTFEGQFLLKFGEKGTKN
GQFNYPWDVAVNSEGKILVSDTRNHRVQLFTPDGTFLNKYGFEGALWKHFDSPRGVAFNH
EDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHR
VQVFEPNGNFLCKFGAQGSGYGQMDRPSGVAVTPDGIIVVVDFGNNRILKF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttccagactcagatctgcaaacctgcccgctttgcaaggagctctgcggc
tcctctgctcccatttcctccagctcctctacctcctcgacatcttcacatacctcattg
tcctccagccagaccaacaggaggctccacgtcctgccctgcctgcacgccttctgcagg
cagtgcctggagggccagcgcagtcccggggacccgctgaagctgcgttgccccacctgt
gaccagaatgtgtccatctctgaggccggggtggactcccttccctcgtccaacttcctc
ttcagcaacttgctggatgtggtggtgagctccgaggattccatccataacaagaacggc
cacctccaccaccggggaggcatagttggaggttcctccggcttccatcattctcagttg
ggtctactgcaccccccccacctgggagaacctcagtgcagctcctgcgacgaggagaac
ccggccacgtcccactgcctcgactgtcaggagtacctgtgcgacaactgcgtgcgtgca
caccagcgggtacgtttgaccaaggaccacttcatcgagtgtctgggagagaacttccac
ttgggtcggctcaattccaacagcaactcgggccagccgggggtggcgctttccctcgca
cagtctctgcagaacaattttgccctgctgtccctcttccaggatcgcatgagcttctgt
cagcaccacgaaaatgaggtgttcctgttcttctgcgaatcctgctcggtgcctatctgc
agggagtgcagcatgggccgccacatgggccacaccttcgtttacctgcaggacgccgtg
caggactgcagggccatcaccatccagctgctggcagaggcgcaacagggaagacaggcc
gtgcagatgagcatggagaaggtccaggccatggccgagcaggtggaaatcaaagccaaa
gtggtgcagacggaggtgaaggcgctcgtcctcaggcacaagaaggcgctggaggagaga
gagtgcgaactgctgtggaaggtggagaagatccgtcaggtgaaagccaagtctctctac
ctacaagtggagaaattgcaccagagtctgaccaaactagacagcaccatcgcggccgtc
agccaagtgctagacgaaggccggcacctcgacctgctcctggccagggagcgaatgctc
actcagatccacgaactcaagactctgaggggtctgctccagccacaagaagacgatcgc
ttcatgtttactcctccggaccaggctctctacatagccctccagtccatgggcctcatc
agcagcggagccttcgcgccggttacgaaagcccacggcgaagggttaaaaagcgctctt
cgaggcaaggccgccaccttcacggtgatcggatacgaccacgatggcgagccgcgcctc
tccggcggggacgcggtctccgctataatcatgtcggtcccagacggcagcctgtccgcc
gccgaggtgacggaccaccagaacggctcgtacaccgtcggctacctgcccaaatgcgag
ggagagcaccttgtttcggtgctggtgtgcaaccagcacatccaggggagccccttcaag
gtgacggtcaagtcggggcggagctacagctccctgggctccaaggtgtcagcttttggg
tgcgaaggggaaggagatggtcagctgtgtcggccctggggagtgtgtgtggacagggaa
ggatacgtggtggtggccgatcgcagcaacaaccgtattcagatattcaagccttgcggt
gccttccaccataagtttggctctctggggtccaggcccggtcagtttgaccgccccgcc
ggcgttgcgtgcgacagccagaggcgggtcattgtggccgataaggacaatcaccgcgtg
caggtgttcacgttcgagggccagttcctgctgaagttcggggaaaagggcaccaagaac
ggacagttcaactatccctgggatgtggccgtcaactctgagggtaagattctggtctcg
gacaccaggaaccaccgcgttcagctcttcacccccgacggcacctttctgaacaagtac
ggcttcgagggggccctgtggaaacactttgactctcccagaggagtggccttcaatcac
gaagaccacctggtggtcaccgacttcaacaaccaccggcttctggtcatccggcccgac
tgccagtcggcccgcttcctgggctccgagggcaccgggaacgggcagttcctgcgtccg
cagggcgtcgccgtggaccaggagaaccgcatcatcgtggccgactcccgcaaccacagg
gtccaagtgttcgagcccaacgggaacttcttatgcaaattcggcgcgcaggggagcggc
tacggacagatggaccgcccctccggcgtggccgtgacgcccgacggaatcatcgtggtc
gtcgacttcggaaacaaccgcatcctcaagttctaa
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