KEGG   Takifugu rubripes (torafugu): 101076176
Entry
101076176         CDS       T02386                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03082  ATP-dependent chromatin remodeling
tru03083  Polycomb repressive complex
tru04110  Cell cycle
tru04330  Notch signaling pathway
tru04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101076176
   03083 Polycomb repressive complex
    101076176
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    101076176
   04350 TGF-beta signaling pathway
    101076176
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    101076176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tru03036]
    101076176
Enzymes [BR:tru01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101076176
Chromosome and associated proteins [BR:tru03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     101076176
   HDAC complexes
    Sin3A-HDAC complex
     101076176
    BRAF-HDAC complex
     101076176
    REST complex
     101076176
    SHIP complex
     101076176
    MiDAC complex
     101076176
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     101076176
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101076176
  Chromatin remodeling factors
   NuRD complex
    101076176
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 101076176
NCBI-ProteinID: XP_011617479
Ensembl: ENSTRUG00000005364
LinkDB
Position
2:complement(11800999..11805229)
AA seq 490 aa
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSVGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDASIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEAEDHNKRISIRAHDKRIACEEE
FSDSEDEGEGGRRNSVSFKKAKRAKTEGEKEGEEKEKKGEEETKEVKEEEKVPEEEKMDT
SKPKEESKTP
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggcgcttacttcccaaggaacaaagaaaaaagtttgctactattatgatggtgacgtt
gggaattattactatggccagggtcatccgatgaaaccccacagaatccgcatgacccac
aacctcctgctcaattatggcctctacagaaagatggagatttaccgtccgcacaaagct
aacggagaggagatgaccaagtaccacagcgacgattacatcaaattcctgcgctcgatc
cgaccggacaacatgtcggagtacagcaagcagatgcagagatttaacgtgggagaggac
tgtccggtgtttgacggtttgtttgagttctgccagctgtccgtggggggctccgtcgct
ggtgctgtgaagttgaataagcagcagacagacatcgccatcaactgggccggagggctt
caccacgccaagaaatccgaggcctcgggattctgctatgtcaacgacatagtgctggct
attctggaattactgaaatatcaccagcgagttctctacattgacatcgacatccaccac
ggcgacggcgtggaggaggccttttacaccacggaccgcgtgatgaccgtctcattccac
aagtatggagagtacttccctggcacgggcgacctgagggacatcggcgctgggaagggc
aaatactacgctgtgaattaccctctgagggacgggatcgacgacgagtcctacgaggcc
atctttaaacccatcatggccaaggtcatggagatgtaccagcccagcgcggtggttctc
cagtgtggagccgactcgctgtcaggagacaggctgggatgctttaacctcaccattaaa
ggtcacgccaagtgcgtggagtacatgaagagcttcaacctgccgctgctgatgctcggc
ggaggaggctacaccatccgcaacgtggcgcgctgctggacctacgagaccgccgtggct
ctcgatgcctccatccccaacgaacttccatacaacgactactttgagtactttggaccc
gacttcaagctgcacatcagcccgtctaacatgaccaatcagaacaccaacgactacctg
gagaaaatcaagcagcgcctgttcgagaatctgcgcatgcttcctcacgcccccggcgtc
cagatgcaggccatccccgaagacgccgtgcaggaggacagcggagacgaggaggcggag
gaccacaacaaacgcatctccatccgcgctcacgacaagaggatagcgtgcgaggaagag
ttctccgactccgaggacgagggagaaggaggccggagaaactcggtcagcttcaaaaaa
gccaagagggccaaaacagaaggagagaaggagggagaagaaaaggagaagaaaggtgag
gaggaaacaaaagaagtgaaagaagaagagaaggtgccagaggaggagaagatggacacc
tccaagcccaaagaggagtccaagacaccgtga

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