Takifugu rubripes (torafugu): 101076176
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Entry
101076176 CDS
T02386
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03082
ATP-dependent chromatin remodeling
tru03083
Polycomb repressive complex
tru04110
Cell cycle
tru04330
Notch signaling pathway
tru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101076176
03083 Polycomb repressive complex
101076176
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101076176
04350 TGF-beta signaling pathway
101076176
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101076176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tru03036
]
101076176
Enzymes [BR:
tru01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101076176
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
101076176
HDAC complexes
Sin3A-HDAC complex
101076176
BRAF-HDAC complex
101076176
REST complex
101076176
SHIP complex
101076176
MiDAC complex
101076176
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
101076176
Heterochromatin formation proteins
Other heterochromatin formation proteins
101076176
Chromatin remodeling factors
NuRD complex
101076176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
101076176
NCBI-ProteinID:
XP_011617479
Ensembl:
ENSTRUG00000005364
LinkDB
All DBs
Position
2:complement(11800999..11805229)
Genome browser
AA seq
490 aa
AA seq
DB search
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSVGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDASIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEAEDHNKRISIRAHDKRIACEEE
FSDSEDEGEGGRRNSVSFKKAKRAKTEGEKEGEEKEKKGEEETKEVKEEEKVPEEEKMDT
SKPKEESKTP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttacttcccaaggaacaaagaaaaaagtttgctactattatgatggtgacgtt
gggaattattactatggccagggtcatccgatgaaaccccacagaatccgcatgacccac
aacctcctgctcaattatggcctctacagaaagatggagatttaccgtccgcacaaagct
aacggagaggagatgaccaagtaccacagcgacgattacatcaaattcctgcgctcgatc
cgaccggacaacatgtcggagtacagcaagcagatgcagagatttaacgtgggagaggac
tgtccggtgtttgacggtttgtttgagttctgccagctgtccgtggggggctccgtcgct
ggtgctgtgaagttgaataagcagcagacagacatcgccatcaactgggccggagggctt
caccacgccaagaaatccgaggcctcgggattctgctatgtcaacgacatagtgctggct
attctggaattactgaaatatcaccagcgagttctctacattgacatcgacatccaccac
ggcgacggcgtggaggaggccttttacaccacggaccgcgtgatgaccgtctcattccac
aagtatggagagtacttccctggcacgggcgacctgagggacatcggcgctgggaagggc
aaatactacgctgtgaattaccctctgagggacgggatcgacgacgagtcctacgaggcc
atctttaaacccatcatggccaaggtcatggagatgtaccagcccagcgcggtggttctc
cagtgtggagccgactcgctgtcaggagacaggctgggatgctttaacctcaccattaaa
ggtcacgccaagtgcgtggagtacatgaagagcttcaacctgccgctgctgatgctcggc
ggaggaggctacaccatccgcaacgtggcgcgctgctggacctacgagaccgccgtggct
ctcgatgcctccatccccaacgaacttccatacaacgactactttgagtactttggaccc
gacttcaagctgcacatcagcccgtctaacatgaccaatcagaacaccaacgactacctg
gagaaaatcaagcagcgcctgttcgagaatctgcgcatgcttcctcacgcccccggcgtc
cagatgcaggccatccccgaagacgccgtgcaggaggacagcggagacgaggaggcggag
gaccacaacaaacgcatctccatccgcgctcacgacaagaggatagcgtgcgaggaagag
ttctccgactccgaggacgagggagaaggaggccggagaaactcggtcagcttcaaaaaa
gccaagagggccaaaacagaaggagagaaggagggagaagaaaaggagaagaaaggtgag
gaggaaacaaaagaagtgaaagaagaagagaaggtgccagaggaggagaagatggacacc
tccaagcccaaagaggagtccaagacaccgtga
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