Takifugu rubripes (torafugu): 101076535
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Entry
101076535 CDS
T02386
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101076535 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101076535 (ndc1)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101076535 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
101076535
NCBI-ProteinID:
XP_003975443
Ensembl:
ENSTRUG00000011897
UniProt:
H2TZG9
LinkDB
All DBs
Position
22:complement(3929792..3936306)
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AA seq
670 aa
AA seq
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MFPSEQNCWFVRKVIYWRAAASIAWAVLLLPPFTAAFVLFSRFSLFHPIQTLSECLAFLT
SASAIFSLILLSGVMVILGFLNLEYYTVVPTIACSKIELLGQLLHPRQLANSLICCIMGV
IVAWCCAITTGSRYDTLGSMCPQSDGDTSQMCLNEYHLILLLGGAFVGLSHSLLGVIHNM
NYVSFNTVQQYKYLCVKGSLTTVVKCSATQALYSVRSFIIVYFFFGYIPKAWICKTLSLQ
LDNSVHPLDSIAGLFNLSLVYHLWISASFLLSTWHFTLLLFRIYVTEVYNFPVQSSFTED
VQQCLPKVLSEKQPVILKFMALQDLALLSQHSPSRRCEVFSLSQPGGHPHNWNAISGECL
SLLTELNQRLVSYHDSVATNGRAKSLSTASERKTSSETSVTSGAEDPMSPRPTLLLKTPV
SVFARTVTGTPKSPLTAPFTPDLDSPFTSPTLRRLTTPAEQCSPWSGTLQSPHVMRRGVK
LWSTPTDPQVNGSPSSSPTSVPSPKVQPSKPSLLSQFLLNRREQVKGFLAKRVLIMYLFN
KLPEASSQALFADSQAHIWALEGLSCLVQASFSEDQFGVVQTTLPSILSCMLTLQEAVDR
HFKLPHASSKPVRSSSSMEDSTHKTLRFALRATLKTAIYRITTTFRDHLKAVQLSPEHQK
RLQQFLEYKE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttcagaacaaaattgttggtttgttcgcaaggtgatttactggagagctgca
gccagtattgcttgggccgtcttgttgctgccacccttcacggcagcttttgtactcttc
agcaggttcagtctcttccacccaattcaaacattatcagaatgcctggccttcttaaca
agtgcaagtgccatcttctctttaattttattgtccggggtcatggtcatccttgggttc
ctgaacctggagtattacaccgttgtcccaactatcgcatgctcaaaaattgaattgttg
ggtcagttgctgcatccccgtcagcttgccaattcgttgatctgctgcatcatgggagtg
atcgtagcttggtgttgtgctatcacaactggctccagatatgatacactcggctccatg
tgtccacagagtgatggtgacacttctcagatgtgtctgaatgagtatcacctcatcctt
ctgcttggtggagcttttgttggactctctcacagtctgctgggtgtgatccacaacatg
aattatgtgtcttttaacactgttcagcaatacaaatacctgtgtgttaagggatcccta
accacagtagtgaaatgcagtgctactcaagctttgtactctgtaaggagcttcattatt
gtgtatttcttttttggatacattccaaaagcatggatttgtaaaacattgagtcttcag
ttggacaattcagtccacccgcttgacagcatagcaggattatttaatctctccctggtc
tatcatttgtggatcagtgccagttttctgctctccacatggcacttcaccctgctgctc
tttaggatctatgttactgaggtgtataattttccagtacagtcatcttttactgaggat
gtacaacagtgtctccccaaggttctcagtgagaagcagccagtgatattgaagttcatg
gctctacaagatttagctctgctgtctcagcactccccatctcgacgctgcgaagtcttc
agtctgagtcaaccaggtgggcatcctcataactggaacgccatcagtggagagtgtctg
tctttgttgaccgagctcaaccagagactcgtatcctatcatgactccgtggcaaccaat
ggcagagccaagtcactatctaccgccagtgaaaggaagacatcatcagagacctcagtt
acttcaggtgctgaagatccaatgagtccaaggccgacattactgttgaaaaccccggtc
tctgtgtttgcccgcaccgttaccggcaccccaaagagccctctgacggcaccattcact
cctgacttggacagcccatttacatctcccaccctgcgtcgacttaccactcctgcagaa
caatgctcgccgtggtcgggcacgttgcagagcccacatgtgatgaggaggggcgtgaag
ctctggtccacacccacagatccacaggtgaatggtagcccctcttcctcccccacctca
gtgcccagtccaaaggtgcagccatccaaaccgagccttctatctcagtttcttctaaac
agaagagagcaggtcaaaggtttcttggcaaaacgggtcctaataatgtatttgtttaac
aagcttccagaagcctccagtcaggctctgtttgccgacagtcaggctcacatctgggct
ttagaaggactatcttgtctcgttcaagcatctttttccgaagaccagtttggagtcgtg
cagactacattacccagcatcctcagttgcatgctaaccttgcaggaggcggtggatcga
cacttcaagctaccccacgcctccagtaaacccgtgaggtcgtccagcagcatggaggac
tccactcacaaaacactgcgctttgccctcagagccactctcaagaccgccatctacagg
atcacgaccactttcagagatcatttaaaagctgttcagctgtctccagagcaccagaaa
agattgcagcagtttctggaatataaggaataa
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