KEGG   Takifugu rubripes (torafugu): 101077130
Entry
101077130         CDS       T02386                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4B-like isoform X1
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03250  Viral life cycle - HIV-1
tru04144  Endocytosis
tru04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101077130
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101077130
  09143 Cell growth and death
   04217 Necroptosis
    101077130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tru04131]
    101077130
   03400 DNA repair and recombination proteins [BR:tru03400]
    101077130
Membrane trafficking [BR:tru04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    101077130
DNA repair and recombination proteins [BR:tru03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101077130
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_5 AAA_16 TIP49 AAA_14 AAA_22 IstB_IS21 RuvB_N AAA_25 AAA_18 DUF815 AAA_33 AAA_2 nSTAND3 RNA_helicase AAA_17 AAA_24 PhoH Mg_chelatase AAA_28 Parvo_NS1 Tae4 AAA_7 NACHT bpMoxR TPR_1 DUF5906 Sigma54_activat MCM Viral_helicase1 ResIII
Other DBs
NCBI-GeneID: 101077130
NCBI-ProteinID: XP_011612869
Ensembl: ENSTRUG00000016180
UniProt: H2UWP6
LinkDB
Position
20:5186055..5189988
AA seq 434 aa
MAGANLQKAINLVAKATEEDKAQNYEEALKNYQNAIQYFLHAAKYEMSSDRSAECIRARC
VDYLDRAEQLKEYLKKKENSPAKPIKESQSEDRGDENEEDAEKKKLHNQLSGAIVMERPN
IGWGDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATE
ANNSTFFSISSSDLVSKWLGESEKLVKSLFTLAREHKPSIIFIDEIDSLCGSRSENESEA
ARRIKTEFLVQMQGVGNNNDGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPEVHARSYMF
KLHLGSTPNDLTETDFVTLGKRTEGYSGADISIIVRDALMQPVRKVQSATHFKKVRGSLW
HNPGAVVEDLLTPCPPGDPGAIKMTWMDVPGEKLLEPVVCMEDMLRSLANTKPTVNEQDL
DKLKKFTEDFGQEG
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggcaggtgcaaatttacagaaagctatcaatttagttgccaaggctacagaggaggac
aaagcccaaaactatgaggaggcgctcaagaactaccagaacgcaattcagtattttctt
catgctgccaaatacgagatgtcgagcgatcggagtgccgagtgcatcagggcccggtgc
gtggactacctggacagagccgagcagctgaaggaatacctgaagaagaaggagaactct
ccggccaagcccatcaaagagtcccagtctgaggacagaggcgatgaaaacgaggaggat
gcagagaagaagaagttacacaatcagctctcgggtgccattgtgatggaaagacctaat
attgggtggggtgatgtcgccggacttgagggagccaaagaagccttaaaagaagctgtg
atcctgcccattaagttccctcatctgttcactggaaagcggactccatggaggggcatc
cttctgttcggccctcctggaacagggaagtcatacctggccaaggccgtagccacagaa
gccaacaactccaccttcttctccatctcctcctctgacctcgtgtcgaagtggttgggc
gagagtgaaaagctggtcaagagcctgttcacattagcccgcgaacacaagccctccatc
atcttcatcgatgagattgactccctctgtggctccaggagcgagaacgagagcgaggcc
gcccgcaggatcaagacggagttcctcgtacagatgcagggtgttggaaataacaacgac
ggggttctggttctgggagccacaaatataccctggacgctggactctgcaataaggaga
aggtttgaaaagcgcatctacatcccgctgcccgaggtgcacgctcgctcctacatgttc
aaactgcacctgggctccacccccaacgacctgacggagacagactttgtcaccttgggc
aaacggacggagggctactctggggcagacatcagtattattgtcagagacgctctcatg
cagcccgtcaggaaggttcagtcggccacgcacttcaaaaaggtccgcgggtcattgtgg
cacaaccccggggccgtcgtggaggacctcctgactccatgtcctcctggggatcctggc
gccataaaaatgacgtggatggacgttcctggggagaaacttctcgaaccggtggtctgc
atggaagacatgctgagatcactggcaaacaccaaacccaccgtgaatgagcaggacctg
gacaaactaaagaagttcactgaggactttggtcaagaaggttaa

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