Takifugu rubripes (torafugu): 101077319
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Entry
101077319 CDS
T02386
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X3
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04120
Ubiquitin mediated proteolysis
tru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101077319 (ube4b)
04120 Ubiquitin mediated proteolysis
101077319 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101077319 (ube4b)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101077319 (ube4b)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
U-box type E3
101077319 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
101077319
NCBI-ProteinID:
XP_011620291
Ensembl:
ENSTRUG00000011071
UniProt:
H2TTD7
LinkDB
All DBs
Position
3:complement(8460585..8474460)
Genome browser
AA seq
1183 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGATSQPLPAAS
QSLGLNVHSGTPATSPVGTAGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDT
ASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSSNTDVSEEQALQLICRILRVSW
KEQDRDVIYLPSLAIEFHQNPKDVYSDFKDLIGQILMEVLMMSTQSRIHNPFASLTATSE
PITASKSPDHRMTLVQPSSHGGSPMGPSSGSFGASSLSSLGACGGGVSCDSPSDRFTIET
CKETEMLNYLIERFDSVGIEERKAPKMCSQPNVSQLLSNIRSQCISHVAIVLQGTLTQPR
SPLHQSFLVPYMLCRNLPYGFIQELVRITHQDDEVFRQIFVPILHGLALAMKECSFDSDN
FKFPLMALAELCEIKFGKTHPVCSLITSLPLWCPKPLSSGCGRELQRLSYLGTFFSLSVF
AEDDAKVGEKYFSGPAITIENTRVVSQSMQHYLESARGDLFKMLHNILLNGETRESALNY
MAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVDPYYIFHPRCRLVV
SPEETRLKATMEELKSWLTELNEDPRKFSEPKFPTECFFLTLHTHHLSILPSCRRYIGRL
RAIRELNRSVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAKACADMGLLDENLL
RRCLQFYSTVIQLILRMVDPAYPNITLPLNPEIPKSFAALPEFYIEDVTEFLLFIVQYSP
QVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQLRTQRFSEMMENHP
LCIKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNLAHHGTFLEEFNSG
KQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMRNKEQWDQLPREQQQSRQSQLTQDE
RVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVEN
PEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSSIA
IEKFKLLLEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPSGNIMDRSIILR
HLLNSPTDPFNRQPLTESMLESVPELKERIHTWMREKQTGRPG
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattgagcgcagatgagattcgtcgaaggagacttgcgcgactggcaggtgga
cagacgtcccagcccagcacccccctcagcacgcccctgacgtccccacagagagagacc
ccacctggacccctccctggaccctcaggtgccaccagccagccgttaccagcagcctct
cagtctttgggactcaacgtccacagcggcacccccgccacatccccagtaggcaccgct
ggtgtggcatacggcagtcagagcagcgagggcgtcagctccctctccagctccccctcc
aacagcctcgagacgcaatcccagagtttgtcacggtcccagagcatggacatcgacact
gcctcctgcgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatggag
gtggaggacagtgatcgcagggagaagagaaacctgactgaaaaggaaacctcttcaaac
acggatgtgtcagaggaacaagccctgcagcttatttgtaggatcctccgtgtgtcatgg
aaggagcaggatagagatgttatctatctgccttcactggccatagagttccatcagaac
cctaaagatgtgtactccgactttaaagacctgataggccagatcctaatggaagtctta
atgatgtctacacagtcgcgtattcacaaccctttcgccagcttaaccgccacttctgaa
ccaatcacagcatccaaatctcccgatcatcgcatgacattagttcagccctccagccac
gggggcagtcccatgggtcccagttcagggtcttttggagccagctctctgtccagtctc
ggtgcatgtggtgggggggtgtcctgtgactcacccagcgaccgtttcaccattgaaacg
tgcaaagagacagagatgctgaactacctcatcgagcgatttgacagtgttggcattgag
gagaggaaagctcccaagatgtgcagccaaccaaacgtcagccagcttctcagcaacatt
cgctctcagtgtatttctcacgtcgctatcgtcctgcaaggcaccctgacccagcctcgg
agcccactccaccaatcttttctggtaccttatatgttgtgtcggaaccttccatacggc
ttcattcaggagctggtgcgcattacacaccaggatgacgaggtcttcagacagatattt
gtccccatcctccatggactggcactggccatgaaagaatgttcctttgacagtgataac
tttaaattccctctcatggcattagctgagctctgtgaaatcaagtttggaaagactcat
ccagtctgtagtttgataacgtccctccctctatggtgtccaaaacctttgagttctggc
tgtggcagagagctccagagactgtcctacctgggaacctttttcagcctctctgtcttt
gcagaggacgatgcaaaagtaggagagaagtatttctctggtccagccatcacaatagag
aacacgcgagttgtcagccagtcaatgcagcactacctggaatcagcaaggggtgatctt
ttcaaaatgctccataacattttactaaatggagaaacgcgcgagtcagcgcttaattac
atggcagctctagttaactacaatgtgaagaaagctcagatgcagactgatgataaactg
gtatcgacggatggcttcatgctcaactttttatgggtgctgcagcagctgagtatgaag
atcaaactggaaacagtggacccttattatattttccacccacgttgtcgccttgttgtc
agtcctgaggagacccgcctgaaagccaccatggaggagctcaaaagctggcttactgag
ctgaatgaagatccccgcaagttctcagaacccaaattccccactgagtgtttcttcttg
acactacacacccaccatttgtccattctgccgagctgcaggcgctatattggcaggttg
cgagcaatccgtgaactgaacaggagtgtagaagagttaaagaacagtgaaagccagtgg
aaagattctccccttgccagtcgacacagagagatgctgaagcgatgcaaaacccagctc
aagaaacttgtccgagccaaagcttgtgctgacatgggccttctggatgagaacctacta
cgcagatgtctgcagttctacagcacagtaatccagcttattcttcgcatggtggaccct
gcttaccctaacatcacattgcctctgaaccctgagattcctaaaagctttgctgctctg
cctgagttctacattgaagatgttactgagtttctgctttttattgtgcagtattctccc
caggttttatatgagccatgtgtccaggacatcgtcacctttttggtggttttcatctgc
agccagaactatatcaggaacccctatcttattgccaagcttgtggaggtgctatttgtc
accaacccagctgtacagcttcgtactcagcgattctctgaaatgatggaaaaccatccg
ctgtgcatcaaacagctggtgcctgccctaatgaagttctacaccgatgtcgagcatact
ggagccaccagcgaattctacgataagtttacaatacggtaccatatcagcactatcttc
aagagcctctggcagaaccttgcccaccatggcactttcctggaggagttcaactccggc
aagcagtttgtgcgatacatcaacatgctgattaacgacaccaccttcctgttagacgaa
agtctggagtccctgaagcgtattcacgaggttcaagaagagatgaggaataaggagcag
tgggatcagctgcccagggagcagcagcagagccgccagtcccagctgactcaggacgag
cgggtttctcgctcctatcttgccctggccactgagactgtggatatgttccacatcctc
accaagcaggttcagaagcctttcctcaggcctgagctcgggcctcgtttagcggccatg
ctgaactacaacctccaacagctctgtgggcccaagtgtcgtgacctgaaggtggagaac
ccggagaaatacgggtttgagcccaagaagctcttagaccaactgaccgatatctacctg
cagctagactgtgcccgcttcgctaaagcaattgcagatgaccagaggtcctacagccgc
gagctctttgaagaagtgatttcaaagatgaggaaggccggtattaagtcctccatcgcc
attgagaagttcaaactgttgttggagaaagtggaggaaatagttgccaagaactctcag
tctgaaatggattacagcgacgcacctgatgagttcaaagacccactgatggacactctt
atgaccgaccccgtgattctgccctccgggaacatcatggacagatccatcatcctgcgg
cacctgctcaactcccccaccgacccattcaaccggcagcctctcacggagagcatgctg
gagtcagtccctgaactgaaggagaggatccacacttggatgagagagaaacagactgga
cgacctggctga
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integrated database retrieval system
