KEGG   Takifugu rubripes (torafugu): 101077353
Entry
101077353         CDS       T02386                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tru01009]
    101077353 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tru03036]
    101077353 (kdm5a)
Enzymes [BR:tru01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     101077353 (kdm5a)
Protein phosphatases and associated proteins [BR:tru01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101077353 (kdm5a)
Chromosome and associated proteins [BR:tru03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101077353 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 GlgE_dom_N_S
Other DBs
NCBI-GeneID: 101077353
NCBI-ProteinID: XP_011611772
Ensembl: ENSTRUG00000002183
LinkDB
Position
18:complement(8084020..8094837)
AA seq 1754 aa
MSVFAEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAEKTGICKIRPPEDWQPPFACDVR
NFRFTPRIQRLNELEALTRVKLNFLDQIAKFWELQGSKIRFPHVERKILDLYRLSKIVSS
EGGFETVCKEKRWSKVSSRMGYPSGRGTGSLLRSHYERILYPYELFQSGATLTGIQRLYE
EGDDPEEMDEGVGEDAMEEEQDEEEDEEEEDEEEKEKDGEHDGLQSNSHLPERRSRRLKS
ERENKEPKGLKIFDASPKMVGLEIVADDGFNKKQRQLKAQAFAIKMRPRKETLEVNFIDL
YFCLVCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFG
FEQAGKEYSLQSFGEMADQFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADI
SSKEVGSGFPVRDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGMKVPWLYV
GMCFSSFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEQLEAVMKKLAPELFDSQPDLL
HQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLP
MGRQCVAHYRRLHRYCVFSHEELLCKMAADPESLDVELATSVFKEMGETMEEETKLRQAA
QKLGVLSSEQEVFELLPDDERQCYKCKTTCFLSALTCSCSPDRLVCLHHAADLCDCPHGN
KCLRYRYDLEEFPAMLYGVKTRAQSYDTWSKRVTEALSADQKNKKDLIELKVLLEDAEDR
KYPEKTLFRRLREMVKEAETCSSVAQLLLSRKQRHSSRLRSENSCNRTKLTVDELKAFVD
QLYRLPCIISQARQVKELLEKVEEFHERAQAALSDEMPDSSKLQALLDLGSGLDVELPEL
PRLKQELQQARWLDEVRVTLAEPHRFTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTV
SERWEDKARACLQARPPHSLVTLESIVIEARNIPAYLPNILALREALQKAKDWTVKVEAI
QSGSSYAYLEQLESLLARGRSIPVRLDPLAHVESQVAAARAWRERTGRTFLKKNSTYTLL
QVLSPRIDIGIYGNSKSKRKRVKELMEKERGGFDPDALSDLEECPEEVRDPSTVVAAYKS
KEQKEVESIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLP
KTGSQKKLGMSLQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCL
TERAMSWQDQARQALATDELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDL
QGHIQTFQQSGFSRATSPRQSLDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIP
VKSEEVVSHMWPAATPSFCAEHAYSSASKTCVQNISTPKKQPRKTPLVPRSLEPPVLELS
PQAKAQLEELMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDESLMEKPLKIK
LKDSEKKRKRKLERAEHHHMLLASAVTGASSMGDMRPPKSKDLKRVGLEMGLGKSKKKKL
KLNLNKNREMKQLAKRLAKEEKERKRKEKAAAKAEALREGLDKRKDKKILDIPSKYDWSG
AEDSNDENAVCASKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICVDCS
RKAAGTSDGGAVEMALEEVTEESVVVLATSMCTGGSVQVLPSTPAMASWPRISSASHLHT
AASHQQQKEHEQGS
NT seq 5265 nt   +upstreamnt  +downstreamnt
atgtctgtattcgccgagttcgtcccccctcccgagtgcccggtttttgagccgagttgg
gaggatttctcagatcctttaggattcatcaacaagattcgacccattgcagagaagacg
gggatttgcaagatccgcccccctgaggactggcagccgccgttcgcctgcgacgttcgc
aattttcgcttcacgccgcgaatacaaaggctgaatgaactcgaagccctcactcgtgtc
aagctgaactttctggatcaaattgcaaagttctgggaactgcaggggtcgaagattcga
ttccctcacgtggagagaaagattctggacctctatcgactcagtaagatcgtatcatct
gagggtgggtttgagacggtgtgtaaagagaagagatggtccaaagtgtccagccgaatg
ggctacccgtcaggaagaggcactggttcgctgctgcgctcccactatgagaggatcctc
tatccatatgagctcttccagtctggggccacgctcactggtatccagcgactgtatgag
gagggcgacgatccggaggagatggacgagggagtcggtgaggatgcaatggaagaagag
caggatgaggaggaggacgaggaggaggaggacgaggaggaaaaggagaaagatggggag
catgatgggctgcagtccaactctcatctgcctgagagacggtccaggcgcctcaaatca
gagagagaaaacaaggagcccaaaggcctaaagatctttgatgcaagtcccaagatggtt
ggccttgagattgttgcagatgatggatttaacaaaaagcagcgtcaacttaaagcccag
gcttttgccattaaaatgaggccacgcaaggagactctggaggttaactttattgacctg
tacttctgcctggtgtgcggccggggcgacgaggaggatcggctgttgctgtgtgacggc
tgcgatgacagctaccacaccttctgcctgatcccgcctctacaggatgtgcccaagggc
gactggcgctgccctaaatgtgttgccgaggaatgcagtaaacccagggaggcgtttggt
ttcgagcaggcggggaaggagtacagcctgcagagctttggagaaatggctgatcagttc
aagtctgactacttcaatatgcctgttcatatggtcccgacagagttggtggaaaaagag
ttctggcgcctggtgagcagcatcgaggaggacgtcattgtggagtatggtgctgacatc
agctccaaggaagtgggcagcggatttcccgtgagagacggtaaacgaaggctcctggga
gatgaggaggaatacgccaactcgggctggaatctgaacaacatgccggtgttggagcag
tcggttctcacccatataaacgtggacatctcgggtatgaaggtgccctggctctacgtg
ggcatgtgtttctcttcattctgctggcatattgaggaccactggagctactccatcaat
ttcctgcactggggtgagccaaagacttggtacggtgtgccagcgtctgcagcggagcag
ctggaggccgtaatgaagaagctggctccggagctgttcgactcccagccagatctcctc
catcagctcgtcaccatcatgaatcccaatgtcctcatggagcacggagtccccgtctac
agaaccaaccaatgtgcaggggagtttgtggtgaccttccctcgagcctatcacagtggt
ttcaaccagggctacaactttgcagaggcagttaacttctgcactgctgactggttaccc
atgggtcgccagtgcgtggcccattaccgacgcctccatcgttactgtgtgttctcccac
gaggagctgctctgcaaaatggcagcggacccagaaagtctcgacgttgagctggccact
tccgtcttcaaggaaatgggtgaaacgatggaagaggagacaaaactaagacaagctgcc
cagaaacttggggttctgtcctcagagcaagaggtttttgagcttttacctgatgacgag
cgccagtgttacaagtgtaagacgacgtgcttcctgtctgcgttgacctgctcctgcagc
cccgatcggctggtctgtcttcaccacgctgcagacctctgcgattgtccacatggcaac
aagtgtcttcggtatcgctacgatctggaggagtttccagcaatgctgtatggggtgaag
accagggcccagtcatacgacacttggtccaaaagggttactgaagccctgtctgctgac
cagaaaaacaaaaaagatcttattgagctcaaggtcttgcttgaagatgcagaggaccga
aaatatcctgaaaaaactttgttccgtcggctgagagagatggtaaaggaggcggagacg
tgctcctctgtggctcagctgctgctgagccgcaaacagaggcacagcagtcgtctgcgt
tccgagaacagttgcaaccgcacgaagctgaccgtggacgagcttaaagcctttgtggat
cagctctacaggctgccctgtatcatcagccaggcacgacaagtgaaagagttgcttgag
aaagtggaggaattccacgagcgagcccaagcggcgctgtccgatgagatgcccgattcc
tccaagctgcaggccctgctggacctgggtagcggtcttgatgtggagctgccggagctg
ccacgcctcaaacaggaactgcaacaggcccgctggctcgatgaggttcgtgttaccttg
gctgaacctcatcgcttcaccttagagctgatgaagaggctgatagactctggggtgggc
ctggctccccatcatgctgtggaaaaggccatggctgagctacaagagatcctaacggtc
tcagagagatgggaggacaaggctcgtgcctgtctgcaggctcgacctccacacagtttg
gtgacattggagagcatcgtgattgaggctcggaacatcccagcatacctacctaatatt
ctggctctcagagaagccctacagaaggccaaggactggacagttaaggtggaagctatc
cagagtggtagcagctacgcttacctggagcagctggagagcctgctggcccggggacgc
tccatccctgttcggctcgatccgctggcacacgtagagtctcaggtggctgcagcccga
gcctggagggagaggacgggccgcaccttcctcaagaagaactccacatacactcttctt
caggtccttagcccccgcattgacatcggcatttatggaaacagcaagagcaaaagaaag
cgtgtgaaggagctcatggaaaaggagaggggcggttttgacccagacgccctgagcgac
ctggaggagtgtccggaagaggtgcgagacccctccactgtggtagcggcctacaaatcc
aaagagcagaaagaagtggagtccatccactcgctacgggctgcaaacctggccaagatg
gccatggccgaccgcatcgaggaggtgaaattctgcctgtgccggaagactgcgagcggc
ttcatgttgcagtgtgagctctgtaaggactggttccacggggcgtgcgtgcctctgccc
aagacgggatcgcagaagaaactgggcatgagtctgcaaagcaatagcaaagactccaag
ttcctgtgtccactctgccagcggtccaggaggccgagactagaaacgatcctgtcgctt
ttggtgtcgcttcagaagctcccagtgcgcctgcctgaaggagaggccctccagtgtttg
acggagagggcaatgagctggcaggaccaagctcgtcaagctcttgccacagatgagctc
tcttcagccctggcaaagctgtctgtgctgagtcagcgtatggtggaacaggcagcaagg
gagaaaacggagaagatcatcaatgcggagctgcagaaagctgccgccaacccagattta
cagggtcacatccagacattccagcagtcgggtttcagtagagccacatcacctcgccag
tccctggactacgatgatgaggagacggactcagatgaggacatcagggagacctatggt
tatgacatgaaggacccaggggaggtgaagccgtacctgttctgtgatgaggagatcccg
gttaagtctgaggaagtggtcagccacatgtggccagcagcgactccttccttctgtgct
gaacatgcatactcctcagcctccaagacctgtgtgcaaaacatcagcacacccaaaaag
cagcccaggaagacccccctggtgcctcgcagcctggagccgccggtgctggagctgtcc
ccgcaggctaaggcccagctggaggagctgatgatgttaggcgacctgctggaagtgtcc
cttgatgaaacccagcacatctggaggatccttcaggccacacaccccccttcagaggag
agattcttgcaggtcatggagcccgatgagtctctaatggagaagccgctgaagattaag
cttaaagattcagagaagaaaaggaaacggaagttagagagggccgaacaccaccacatg
ctgttggcatcagccgtcaccggagcctcgtccatgggggacatgcgaccgcccaagtcc
aaagatctcaaaagagtgggtctggaaatgggcctcgggaaatccaagaagaaaaaactg
aaacttaacctgaacaagaaccgagagatgaagcagctggccaaacggttagccaaggag
gagaaggagagaaagagaaaagaaaaggcagcagccaaggcagaggctctcagagagggc
ctggacaaaaggaaggacaagaagatcctggacattccctccaagtacgactggtccgga
gccgaggactccaatgatgagaacgctgtgtgtgcatccaagaactgccagaggccctgc
aaagacaaggtggactgggtgcagtgcgacggcggctgtgacgagtggttccaccaggtg
tgcgtgggggtgtcgtgcgaaatggccgaaaacgaggactacatctgcgtggattgttcc
cggaaggctgccggcacgagcgacggcggcgcggtggagatggctctggaggaggtgacg
gaagagagcgtggtggtcctggccacctccatgtgcaccggcggcagcgttcaggtcctg
ccatcgacgcccgccatggcgtcttggcctcgcatttcctctgcctcccacttgcacacg
gccgcttcacatcagcagcagaaagagcacgaacaggggagttaa

DBGET integrated database retrieval system