KEGG   Takifugu rubripes (torafugu): 101077375
Entry
101077375         CDS       T02386                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03013  Nucleocytoplasmic transport
tru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101077375 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101077375 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tru03019]
    101077375 (thoc3)
   03041 Spliceosome [BR:tru03041]
    101077375 (thoc3)
Messenger RNA biogenesis [BR:tru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101077375 (thoc3)
Spliceosome [BR:tru03041]
 Complex C
  Other components
   EJC/TREX
    101077375 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101077375 (thoc3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EML DSE1_N eIF2A Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR36-Utp21_1st RMC1_N Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Tricorn_2nd NBCH_WD40 Beta-prop_HPS5 WDR90_beta-prop_4th TRM82_WD PD40 Beta-prop_WDR75_1st B-prop_COPA_B_2nd Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_EIPR1 PAC11 Beta-prop_NUP159_NUP214 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_NWD2_C Peptidase_S9_N WD_LRWD1 Cytochrom_D1 Beta-prop_SCAP Beta-prop_WDR11_1st DPPIV_N PROPPIN Beta-prop_ELP1_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 101077375
NCBI-ProteinID: XP_003978153
Ensembl: ENSTRUG00000002925
UniProt: A0A674PJX6
LinkDB
Position
14:15588792..15590689
AA seq 322 aa
MASQYYQEMQESFKNNNKSREFPAHTAKVHSVAWSCDGRRVASGSFDKTASVFVLEKDRL
VKENNYRGHSDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNDMFFLTNGGGCINIL
SYPELKSIQSINAHPSNCICIKFDPTGKYFATGSTDALVSLWDVEELVCVRCFSRLDWPA
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAYACDDK
EGKYDSNREVGTVKLFGLPNDS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgtcgcagtactaccaggagatgcaggaaagcttcaaaaacaacaacaaaagtaga
gaattccctgctcatacagcgaaggttcattctgttgcttggagttgcgacggccggaga
gttgcttccggttcttttgataaaactgcgagcgttttcgtgctggaaaaagaccgtctg
gttaaagaaaacaactacagaggtcacagcgacagcgtggatcagctctgctggcatccc
accaaccctgatctgtttgtgacagcatctggagacaagaccattcggatatgggacgtc
aggaccaccaaatgcatcgccaccgtcaacaccaaaggtgagaacatcaacatttgctgg
agccccgacggccagaccatcgctgtcggcaacaaggacgatgtggtgaccttcatcgat
gccaagacgcatcgctccaaagctgaggagcagttcaagttcgaggttaacgagatttcc
tggaacaacgataatgacatgttcttcctgaccaacggcggcggctgcatcaatatccta
agttatccagaactgaagtccatccagtccatcaacgctcacccatcaaactgcatctgc
atcaagtttgatcccacggggaagtacttcgccaccggcagcaccgacgccctggtcagt
ctgtgggacgtggaggagctggtgtgtgttcgctgcttctccaggctggactggcccgcg
aggactctgagcttcagccacgatgggaagatgttggcctcagcctccgaggatcatttc
atcgacatcgcggaggtggaaacaggagagaagctgtgggaggttcagtgcgactctccg
accttcacggtcgcctggcatcccaagaggcctctgctggcctacgcctgcgatgacaaa
gagggcaagtatgacagcaaccgtgaagtgggcaccgtgaaactattcggtcttcccaat
gactcctga

DBGET integrated database retrieval system