Takifugu rubripes (torafugu): 101077610
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Entry
101077610 CDS
T02386
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101077610 (rnf40)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101077610 (rnf40)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
101077610 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
OVT1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
101077610
NCBI-ProteinID:
XP_029702897
Ensembl:
ENSTRUG00000015777
LinkDB
All DBs
Position
1:complement(11501014..11511485)
Genome browser
AA seq
1059 aa
AA seq
DB search
MTSVAGLTILPPTGWSWFFSCGSPVTSFPGYFADAQGNILIGPCEVIEAMSGAGGGKRPS
GGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVIQFKNKKLCERLEQRQAM
EDELREKIEKLEKRQATDDTTLLIVNRYWSQLEETVHVLRKRIEPAPVTFTPEPPSASVT
DPIPVEEDGVTLTSPISAVPPPPLPESQNEGEQAEQQQQQEDLVQQEHREEGQEEQQFPP
PPLGLEDQLKPKEPPRDSTGCPQETPPPLPLSENAKGFLATLEHSSEEELALHLQDRMQF
SKEAVACLVCAFDRLHSHIDNMCKQAQTTACENDSQSDVVSTNITVLEDNLRLRDLTTLL
QGKHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDMEKLRNREQKLNKHLAEAMEQL
KSGYSSTGSSGGLSGGQITLNIEKFESLNAELEHNQELANSRMTELEKLQLELQEAVRES
EKLRMDLRNIPEDVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQI
EHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLI
SSLQNHNLQLKGDLQRYKRKLRETQMEINKLRCQSGDAVLILEETNDSLDVKKEEEEDQE
EEEERRKELERQRAREREREREVERERERERERERQRSDELKRKDSDTLKMLRVELKKAQ
ESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESKKLAD
EDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLREKD
DANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVLQSTLA
AMEKELAVRTQALELNKRKQAVEAAQLAEDLKVQLEHTQSKLKEIQVSVAENRTARERES
SNLKRAQEDLSRLRRKLEKQKKVEMYTDADEILQEEINQYKAKLRCPCCNTRDKETVLTK
CFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgtcgctggtttgacaatactacccccaacagggtggagttggtttttttca
tgcggaagcccagtgacgtcatttccaggatattttgcggatgcacagggtaacatttta
atcggtccttgtgaagtgatagaagccatgtcaggtgctgggggagggaaacgtccctcg
ggaggggacagcccccctggcccacctgagaagaaaagtaaaaaagaggaaaaaaccaca
actactctgattgagcctatacgaattgctggtgtatcctcaacggaggaaatggacatg
aaggtcatccagttcaaaaataagaagctgtgtgagcgtttggagcagagacaggcaatg
gaggatgaattgcgtgagaaaattgagaaattagaaaagagacaggccactgatgacacc
actctgctgattgttaatcgctactggtcacagttggaagagaccgtgcatgttctacgc
aaacgtattgagccagctccagttacatttactcctgaacctccatcggcctctgtgact
gaccctataccagtggaagaggatggtgttactctcacctcaccaatatcggcggtgcct
ccacctccgctcccagagtctcagaacgagggagagcaggcagaacagcagcagcagcag
gaagacctggtgcagcaggagcatcgggaagagggtcaggaggagcagcaatttccacct
ccccctttaggtttagaagaccagttgaaaccaaaagagcctccacgagactcaacagga
tgcccacaggaaacgcccccacctcttcccctgagtgagaacgccaaaggttttctggct
acattagagcacagcagtgaggaggaactcgctttgcatctccaggaccgcatgcagttc
agcaaggaagctgttgcatgcttggtgtgtgccttcgacaggctgcacagccacattgac
aatatgtgcaagcaggcccagacaacagcatgtgaaaatgacagtcagtctgacgtggtc
agtacaaatatcactgtgttggaggacaaccttcgactgcgggacctgaccaccctcttg
cagggcaaacaccacaagatgtctatggagtacaatgagttagttgacaaggttaccagc
tcagagactaaggtgtctgagatggaaactacagtggaggacctgcagtgggacatggag
aaactccgcaacagggagcaaaagctcaacaaacatcttgcagaggcaatggaacagctt
aagtctggctacagcagcaccggaagctcagggggcctgtctggaggccagatcacacta
aacattgagaagtttgagagtcttaatgcagagttggagcacaaccaggagttggccaat
agtcgcatgacagagttggagaaattacagttagagctccaggaggccgtgagggagagc
gagaagctcaggatggatttgcggaatattccagaagacgttgtgaaggagactctagag
tataaatgtctgcagtctcaattctcactgctgtacaatgagtctctgggagtgaaaact
cagctggacgaggcacgggctctcctgctcactgcaaagaacgctcacctccgacagatt
gagcacatggagagcgatgagctgtcccttcagaagaagctgcgaactgaggtcattcag
ctggaggacactctggcccaggtgcgcaaagagtacgagatgctgcgtatcgagtttgag
cagaacctggcggccaatgagcaagcagggccgatcaacagagagatgcgacacttaatc
agcagccttcagaaccacaacctgcagctgaagggagacctgcaacgctataaaaggaag
ctgcgggaaacacagatggagatcaacaagttgcgttgccaaagtggtgatgcagtcttg
attctggaggagacaaatgacagcctcgatgtgaagaaagaggaggaagaagaccaggag
gaagaggaggaacggaggaaggaattggagagacagcgggccagggagagagaaagggaa
agagaagtggagagagaaagggagagggagcgggagagagagaggcaacgcagcgatgag
ctgaagagaaaggactcggacaccctgaagatgctccgagtggagctcaaaaaggcccaa
gagtcccagaaagaaatgaagcttttactggacatgtataagtcggcccctaaagaacag
agagacaaagtgcagctgatggcagctgagcgcaagtctaaagctgaggtggatgaactg
aggatgcgtgtgcgagagctggaggagagggagaggaaggaaagtaagaagctggcagat
gaagatgccctcaggaagatccgggtggcagaagagaccattgagcatctgcaaaagaaa
ctggctgccactaagcaggaggaggaagctcttctgagtgagatggacgtgaccggccag
gcttttgaggacatgcaggaacagaacagccgcctgctgcagcagctacgagagaaggac
gacgccaacttcaaactgatgagcgagcggattaaatccaaccagatctacaagctgctg
aaagaagagaaggaggagctggccgaccaagttctcacgttcaaaacccaggtggacgcc
cagctgctcgtggttcagaagctggaggagaaggagggcgtccttcagagcacgctggcc
gctatggagaaagagctggctgtccggacacaggcgctggaactcaacaagaggaagcag
gcggtggaggctgcccagctggcagaggacctgaaggtgcagctggagcacacgcaatcc
aagcttaaggagatccaggtctccgtggctgagaacagaaccgcccgggagagggagagc
agcaacctgaaacgcgcccaagaggacctgtccaggctgaggaggaaactggaaaaacag
aaaaaggtggagatgtacacggacgctgatgagatcctgcaggaggagatcaaccagtac
aaggccaagctgcgctgcccctgctgcaacacccgggacaaggaaacggtgctcaccaag
tgcttccatgtgttctgctacgaatgtctcaagatgcgttacgacaccagacagaggaag
tgccccaagtgcaactgtgccttcggcgccaacgacttccaccgcatctacatcacctaa
DBGET
integrated database retrieval system
