Takifugu rubripes (torafugu): 101077972
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Entry
101077972 CDS
T02386
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03030
DNA replication
tru03410
Base excision repair
tru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101077972 (pole)
03410 Base excision repair
101077972 (pole)
03420 Nucleotide excision repair
101077972 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tru03032
]
101077972 (pole)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101077972 (pole)
Enzymes [BR:
tru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101077972 (pole)
DNA replication proteins [BR:
tru03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
101077972 (pole)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
101077972 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
DNA_pol_B
zf-DPOE
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
101077972
NCBI-ProteinID:
XP_003975040
UniProt:
A0A3B5KBV2
LinkDB
All DBs
Position
21:13857732..13869941
Genome browser
AA seq
2290 aa
AA seq
DB search
MVLQNSGRYRADRGQSGGDRENPDDGSSMSALKRLERSQFADQMDARFGFDRIREPGEKT
GWLINMHPTEILDEDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVSSYV
SKKFQGKVSKLEIVPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNRER
EQSNDAYTSMLSSALSGGNVASADDERMLKSISDQLDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRSSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALLRRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALYGLSMHREIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTNDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEKIPLHEVTNFNEV
CEEIKAKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GAACQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHTLNREEQAKHE
KKRLADYCKRAYKKIHVTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SGAQESGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTVSYPGAMLNI
MVKEGFTNDQYHELVEPASLTYNIKSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFESFLRGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRTILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKINELFSSEGKRQVSIQP
LAAGQIVDMEDFGMPARPLQPAIPISTKRKRSSQGDDSQVESQDVELTQSWREILGPPPP
VGKTREEILVWLRYHKKKWELQLKQRKERRKRRKLLDGDAQPVGGGVIRDGPITGLGSFL
RRTARSILDMPWQIVQIAETSHPGLFKLWAVIGNDLHCMKLNIPRVFYVNQKVQKQEEGA
TYKKVNRMLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCLCMVNKHVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMFLYHHRQGHKAL
FGLFIPSQRKASIFILDTVRSNQMPNLSNLYTAERTALLDKTTEELLPPEKHNFEVRAES
DIKAIYRALQRILLNYKEERRGPTLIAMQSNWELKRLASGMPVLEEFPVVPVHVVDEISY
NVLDWQRLGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTSRPDLGGKEADDSRLVMDSDDKGSVEINAQGCYSTACVELDLQSLAVNTI
LQSQHVNDMEGGASVGVSFDVIQQASLEDMMMGNQGASAVASYDETALCSNTFRILKSMV
VGWVREITQFHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLISEFKRL
GSTVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSKEIFHSLSISFSRCWEFLLWMDP
ANYGGVKGKLPSSVLYGQEGTKKGQEEGDKEGSDDEEEEEAEEADGDGEIDEVEELIESN
WNIMQFLPQTASCQKYFLMIISAYIAAVYHSMKEELRRNAPGATPVKRRGGSQASQQAVE
DLSALPGMISFSQEYVSSELTQNIFTITQKIQKKVTGTRNVTQPSEMFPVLPGSHLSLNN
PALEFIKYVCQVLSLDANIINQMNKLKRDLLRLVDVGEFSDEAQFHDPCHSYILPEVICH
HCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETNVIEMALVEALQKKLMSYTLQDL
MCRKCKGVKEANMPLYCTCARDFDLTFSIKSFSEQIRVFRNIASHYNMSFLEETIDWLGA
MSPNINLNSH
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagtggaaggtacagagcggaccgaggacaaagtgggggagatcgg
gaaaacccggacgatggatcctcgatgtccgccctcaagcggctggagcgcagccagttc
gccgaccagatggacgcccgctttggattcgaccggataagggaaccgggagagaaaaca
ggctggttgatcaacatgcatccaacagagatcctggatgaagacaagaggatgatcagt
gctgtggattattatttcatccaggaggatggaagcaggtttaaggtggccctccctttt
aagccatatttttacattgctactaaaaagaactgtgagagagaagttagctcgtatgtg
tcaaagaagttccaaggaaaagtgtcaaagctggaaattgtacccaaagaggatttggat
ctgccgaaccatctagttggactaaagagaagctacatcaagctgtcgttcaacactgtg
gatgacctcgtcaaggttaagcgtgagatctccccagcagtgcgtaagaacagagagcga
gaacagtccaatgatgcctacacatcaatgttatcaagcgccttgtcaggaggaaatgtg
gcctcagcagatgatgagaggatgctcaagagcatctcggaccagttggacaacatagtg
gatatgagggagtatgacgttccctatcatgtccgattgtccatcgacctcaagatccat
gtggctcactggtacaatgtccgatacagaagcagcgcttatccaccagaaattgtccgg
agagatgatcttgtggagagaccggaccctgtcgtgctggcctttgacatagagaccacc
aaacttcctctgaaatttccagatgcagaaactgaccagattatgatgatctcctacatg
attgatggacagggatttctgatcacaaacagagagattgtctctgagaacattgaagac
tttgaattcactcccaaaccagaatatgaaggacctttcactgttttcaatgaggatgat
gaggcggctcttctccggagatggtttgatcacgttcaagaaactaaaccaaacatcttt
gtgacctacaatggagatttttttgactggcccttcgtcgagacgcgagccgccctctat
ggcctgagcatgcacagagagattggtttccagaaggacagtcagggagagtacaagtcc
agtcaagccatccacatggactgtttaaggtgggtgaagagagacagctacctgccagtg
ggaagtcataatctgaaggcagcagccaaggctaaactgggctacgacccagtggagttg
gacccagaggagatgtgtcgcatggctactgaggagccacagactttagccacctactct
gtgtcagatgctgtggcgacatattacctgtacatgaaatacgttcatccattcatcttt
gccttgtgcaccatcatcccaatggaacctgatgaggtgcttcgtaaaggttccgggact
ctgtgtgaagctctgctcatggtgcaggctttccacgcaaacatcattttccccaacaaa
caggaacaggtcttcaacaaactcaccaatgatggccacgtcctggactctgagacctac
gtgggcggccacgtggaagcgctggagtcgggagtgtttcgcagtgatatcccgtgtcgt
tttaaaatgaacccagctgcttttgacttcctcttgcaaagagttgagaaaactatgcgt
cacgccattgaagaagaggagaaaatccccttacatgaagtcaccaactttaatgaggtt
tgcgaggagatcaaagccaagctaacttctctaaaagaggttccaaacagaattgaatgt
cctctcatttaccatctggatgttggggcgatgtacccaaatatcatcctcaccaaccgc
ctgcagccctctgctatggttgatgaggccacttgtgctgcctgtgacttcaacaagcct
ggcgctgcatgccagaggaggatgacctggcagtggagaggcgaaatcatgccagccagc
cgcagcgagttccatcgcatccagcagcaactggagtcggagaagttcccgccgttgttc
cccaatggcccaccgagggcgttccacacgctcaacagggaagaacaggccaagcatgag
aagaaacggctggcagattactgtaagagggcatataagaagatccatgtcaccaagctg
gaggagcgcgtcaccaccatctgccagagagaaaactccttctacgtcgataccgtgaga
gctttcagagatcggcgttatgaattcaaaggacttcacaaggtgtggaagaaaaagctt
tcgggtgctcaggagagcggagacgcagccgaagtgaagcgctgtaaaaatatggagatc
ctatatgactcgcttcagctggctcacaagtgtattctgaactccttctatggctacgtc
atgaggaaaggggctcgctggtactccatggagatggccggcatcgtgtgcttcacagga
gcaaacatcatcactcaggccagagagctgatcgagcagatagggaggccactggagctg
gacactgacggtatctggtgcgtactccccaacacttttcctgagaactttgtggtgaaa
accagcaacgagaagaagcccaaggtgaccgtgtcttacccgggggccatgctgaacatc
atggtgaaggagggattcaccaacgatcagtatcacgagctggtcgagcctgcatccctc
acgtacaacatcaagtcggagaacagcatcttcttcgaagtggacggaccatatctggcc
atgatcctgccggcttcaaaagaggagggcaagaagctgaagaaaaggtatgctgtgttt
aatgaagatggatctctggctgagctgaagggctttgaggtgaaaagaagaggagagctc
cagcttattaagatatttcaatcatcggtgtttgagtcttttctcagaggtaccactctg
gaagaggtttatgcctctgtggccaaagtagctgattactggctggacgtgctgtacagc
aaggctgccaacatgccagatgcagagctgtttgagttgatttcagagaaccgatcaatg
tccagaaagctggaggattacggagaacagaaatccacttcaatcagcacggctaagaga
ctggccgagttcctgggagaccagatggtcaaagatgccggactgagctgtcgctatgtg
atctccagaaaacctgagggttctcctgtcacagaaagggccattcctctagccatcttc
caggcagagcccagtgtgaagaagcacttcctccgtaagtggctgaagatgcccagcctg
catgatttggacatccgcactatccttgactggagttattacatagagaggttgggaagt
gccattcagaaaatcattaccatccctgcagcgcttcaacaggtgaagaatccagtaccc
agagtgagacatcccgactggcttcacaagaaacttctggagaaaaatgacatttataag
caaaagaaaatcaatgagctcttctccagtgagggcaaaagacaggtgtccattcagccc
cttgcagctggccagattgtagacatggaagacttcggaatgcctgccaggcctctgcaa
ccagccatcccaatcagcaccaagcggaaacggtcttcgcaaggagatgacagccaggtg
gaatctcaggatgtggagctcactcaatcctggagagagatcctgggcccacctccacct
gtggggaagactcgggaggagatactggtgtggctacgttaccacaaaaagaagtgggag
cttcagctgaagcagaggaaagagagaaggaagaggaggaaactgttggatggcgatgct
caacctgtaggaggaggtgtgatcagagatggcccaatcaccggcctggggagcttcctc
cgcaggacagctcgcagcatccttgacatgccgtggcaaattgtgcagattgcagagact
agtcaccctggtttgttcaagctgtgggctgtgattggaaatgacctccactgcatgaag
ctcaacatcccacgcgtcttctatgtcaatcagaaagtgcaaaaacaggaggagggagcc
acttacaaaaaggtgaatcgcatgctgccacgctccaacattgtctactacctttacgag
tactgtgtaccagaggacatgtaccaagaacacatcaatgagatcaatgctgatctctcc
gctccagatattgagggtgtctatgaaacacaggtcccgctgctgtttcgtgcactggtg
cagctcggatgcttgtgtatggtgaataaacatgtggttagggatctggcaggcagagag
gccgacacttttgacctggagcatctggagatgaggtctctcgcccagttcagctacctg
gagcctggaagtgttcggcacatgttcctgtaccatcacagacagggccacaaagctctg
tttggtctgttcattccatctcagcgcaaagccagcatcttcatcttggacacagtcaga
agcaaccagatgcccaacttgagcaacctctacacagcggagcgcactgctctgctggac
aagaccacggaggagctcctgcccccagaaaaacacaactttgaagtcagagcagaaagt
gacatcaaggccatttaccgcgccctccaacgcatactgctgaactacaaggaggagcgg
cgtgggcctactctcatcgccatgcagtcaaactgggagttgaagcggctggcatctgga
atgcctgtgctcgaggagttcccagtcgtaccagtgcacgtagtcgatgagatcagctat
aatgtgctggactggcaacgcctcggggcccggcggatgattcgacactacctcaacttg
gacagctgcctttcacaggcttttgacatggccaggtattaccacctacctgttgggaac
ttgcctcaggatgtgtccatctttggttcggatttgttcctagcaaggcatttacggaaa
cacaaccatctgttgtggctttcgcccacgtccaggcccgacctgggaggtaaagaggcc
gacgatagtcgcctcgtcatggacagtgatgacaaaggatccgtggagattaacgctcag
ggatgttactccacagcgtgcgttgagttggacctacaaagcctggcagtgaacactatc
ctccagtcacagcacgtcaatgatatggagggtggagccagtgtgggcgtcagttttgac
gtgatccagcaggcctcactggaggacatgatgatgggaaaccaaggagccagcgctgtc
gccagctatgacgagacggctctctgctccaacaccttcagaatcttgaaaagcatggtg
gttgggtgggtccgagagatcacacagttccacaacgtgtatgcagacaaccaggtgatg
cacttctaccgctggcttcgctctcccagctctctgctctatgaccctgccctgcaccgc
accctgcacaacatgatgaagaaggtgtttctgcagttgatttccgagttcaagcgactt
gggtcgactgtcgtctacggaaacttcaacaggatcattttgtgcaccaagaaacggaga
attgatgacgccattggttacgtagagtacatcaccaacagcatccattcaaaggaaatc
tttcactctctatccatctcattctcccgatgctgggagttcctgctgtggatggatcca
gctaactatggtggggtgaagggtaaacttccgtccagcgtcttgtatggacaggaaggt
accaaaaagggccaggaagagggagacaaggaaggcagcgatgatgaagaggaggaagaa
gctgaggaagctgacggcgatggcgagattgatgaggtggaggagctgatcgagagtaac
tggaatatcatgcagtttttaccccagacggcctcctgtcagaaatacttcctcatgatc
atttctgcttacatcgcggcggtttaccacagcatgaaagaggagctgcggcgaaatgct
cccggggcaacaccagtcaagagacgcggcggcagccaggcttcccagcaggcagtggag
gatctgagtgctcttccaggaatgatctctttctcccaggaatacgtgtccagtgagcta
acacagaacattttcaccattactcaaaaaatccagaaaaaggtgacaggtacccgaaat
gtaactcagccctctgagatgttccccgtcctgccgggatctcacctgtcactcaacaac
ccagcacttgaattcatcaaatatgtctgtcaggtgctttctctggatgccaatataata
aaccagatgaacaaactgaaaagagacctcctgcgcctcgtggatgtcggggagttttct
gatgaggcccagttccatgacccctgtcactcttatatcctgccagaggtcatctgccac
cactgcaacttctgccgtgaccttgacctctgcaaggacccgtctgtagcacaggatggt
tctgtgttgcctcagtggttctgttccaactgtcaggcacaatatgagaccaatgtcatt
gagatggcactagtggaggctctgcagaagaaactaatgagctacactctgcaggacctg
atgtgcagaaaatgtaaaggagtaaaggaagcaaacatgcccctgtactgcacatgtgcc
agagattttgacctcactttttcaatcaagagcttctctgagcagatcagagtgtttcgg
aacatcgcgtcccactacaacatgagcttcttggaggagacgattgactggttaggcgcc
atgagtccaaacatcaacctgaattctcactaa
DBGET
integrated database retrieval system
