Takifugu rubripes (torafugu): 101078140
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Entry
101078140 CDS
T02386
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101078140 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101078140 (hspd1)
03110 Chaperones and folding catalysts [BR:
tru03110
]
101078140 (hspd1)
03029 Mitochondrial biogenesis [BR:
tru03029
]
101078140 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tru04147
]
101078140 (hspd1)
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101078140 (hspd1)
Messenger RNA biogenesis [BR:
tru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101078140 (hspd1)
Chaperones and folding catalysts [BR:
tru03110
]
Heat shock proteins
HSP60 / Chaperonin
101078140 (hspd1)
Mitochondrial biogenesis [BR:
tru03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101078140 (hspd1)
Exosome [BR:
tru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101078140 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
101078140 (hspd1)
Exosomal proteins of breast cancer cells
101078140 (hspd1)
Exosomal proteins of colorectal cancer cells
101078140 (hspd1)
Exosomal proteins of bladder cancer cells
101078140 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
101078140
NCBI-ProteinID:
XP_003961681
Ensembl:
ENSTRUG00000015595
UniProt:
H2USE5
LinkDB
All DBs
Position
1:14592098..14597915
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AA seq
575 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVDTVIQELKKLSKPVTTPEEIAQVATISANGDV
EIGSIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYILLCEKKISSVQTIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDMAIATGGTVFGDETLGLALEDIQAHDFGKVGEVQITKDDTLLLKG
GGSPADIEKRAAEIAEQLESTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPCLEKMQTANEDQKIGVEIIKRALRIPAMTIA
KNAGMEGSLVVEKILQGPSEIGYDAMNGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEEKEMPGGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtctaccaacagtgatgaagcaggtgaggcctgtgtgccgggccctggctcct
cacctcaccagagcctacgctaaagatgtaaagtttggcgctgacgctcgtgcactcatg
ctgcagggagttgaccttctggctgatgcagtggctgttacaatgggccccaagggtcgc
actgtcatcattgaacagagctggggcagccctaaagtcacaaaggatggcgtgacagtg
gccaaaagcattgatttgaaggacaaatacaagaatattggtgcaaagctggtacaggat
gtggccaacaatactaatgaggaggctggggacggcaccaccactgccactgtgttggct
agagctattgccaaagaaggctttgacaccatcagcaaaggtgccaaccccgttgagatc
cgccgaggtgtcatgatggctgttgataccgtgattcaagaactgaaaaaattatcaaaa
ccagtgacgacccctgaggagattgcacaggtggctacaatctcagccaatggcgatgtg
gagattggcagtatcatctcaaatgctatgaagaaagttggccgcaaaggagtcatcact
gttaaggatgggaaaactctgcatgatgagctggagatcattgagggcatgaagtttgac
cgtggttatatctccccatacttcatcaacaccgctaaaggccagaaatgtgaattccag
gatgcctatatactgctttgtgagaagaagatctccagtgtgcaaaccattgtgccggcc
ctggaaattgccaaccaacaccgcaaacccctggtgattgtggctgaggatgtggacgga
gaggccctcagcaccctggtcctcaacagactgaaggttggacttcaagtggttgctgtt
aaagcacccggctttggcgacaacaggaagaatcaactgcgggatatggccatcgccact
ggcggcactgtgtttggagacgaaacactgggtctggctctcgaagacatccaagcacac
gactttggcaaagtgggcgaggtgcagattaccaaagatgacaccttgctgcttaaggga
ggaggcagcccggcagacatcgagaaacgggcggcggaaattgcagagcagctggagtcg
accaccagtgactatgagaaggaaaaactgaatgagaggctggcgaagctgtctgatggt
gtggcagtactcaagatcggtggaacaagcgacgtagaggtgaatgagaagaaggaccgt
gttacagacgccctcaacgccacccgggcagctgtggaggaggggattgtgcccggcggg
ggctgtgccctgctgcgctgcattccctgcctcgaaaagatgcaaactgccaatgaagac
cagaagatcggtgtggagatcatcaaacgggcgctccgcatccccgccatgaccattgct
aagaatgccggcatggagggctcactagtggtggagaagatcctgcagggaccatcagaa
attggctatgatgccatgaatggagagtatgtcaacatggtagagaagggcatcattgac
cccaccaaggtggtgaggactgcactgttggatgctgcaggagtggcatcgctgctctcc
accgctgaggccgtagttacagagatccccaaggaagagaaggagatgccaggaggaatg
ggaggcatgggtggaatgggcggcatgggaggtggcatgggattctaa
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