Takifugu rubripes (torafugu): 101078165
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Entry
101078165 CDS
T02386
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04270
Vascular smooth muscle contraction
tru04625
C-type lectin receptor signaling pathway
tru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101078165 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
101078165 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
101078165 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101078165 (arhgef12)
Membrane trafficking [BR:
tru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101078165 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
Dicty_CTDC
Motif
Other DBs
NCBI-GeneID:
101078165
NCBI-ProteinID:
XP_029699617
Ensembl:
ENSTRUG00000014895
LinkDB
All DBs
Position
11:complement(8079932..8105297)
Genome browser
AA seq
1437 aa
AA seq
DB search
MSDTQSNFTDRFPKKANRTSSILSKDHPPDKKPKSDKSSLSSNEFDPTEALSVQKSGSSS
VLAEGKPESCGLVPRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLTQIPLSEAESEMLGVSISSPSSPAT
ERPYSPQDRFSAQPSWDENNSVCNQKVDYSAKMLSREQDLQAMKEEYSRKLSPKLLKDTQ
EAKKHIPQQGHPCRTTGATQEPFHGIDADDGSMFETDFSPTFKGDNNTDSSWTSTPTSRG
FGCGSPENHHLKESSFPSPKSTPRSSLNSCHSPDAEDVTDLDSLSPTTVSSPSVSRVISQ
IIGAEDDYFDSDQEQSNGQCNSFNSIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLYADF
YKQTNSKETRRVFMDLHNFFIDRGANLKVPVPDSISADLDRRRTELIPEEINRQLVQMLQ
DSLLPDIQKNLEDFRQKRSMGLTVAEVELSRLDQERIRDRVTLERERSYAENIIGKIEDI
LLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEKEGE
EKKKPRFPSILGPQRRPSRIEAAPVSKALDGRPRPQKQLSQPTLGASEHTEAGRLRGSQS
SEGPELIHSTSVNTSSPSSTAVSSDSSRDADASGTLTSGPSRMSDGLQADPLEGLPYPPT
HFDLYSLDQLQEEDRESDRAHEGTPKIIRRFEGIVGADIQSEDDQGTDSEHDPPYWQQLV
GREVLAGLMPQEIKRQEVINELLYTERAHVRMLRVLDHLFYQRLSKDAILPPADIKNIFT
NLEEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFSRGEEEKIKRAAGTFCSNQPF
SLEIIKTKQKKDSRFASFIQEAESNRLCRRLQLKDIIPIEMQRLTKYPLLLDNIAKYTDN
TAEKDKVKQAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELKNL
DLTKRTMVHEGPLSWKMNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTADTK
HTFSPIIKLNTVLVRSVATDNKSFFVLSMSENGAQIYELMAPTVSDQMTWQRLITQRADA
IKVKPHSVIPLPQTEGERDGVEIITAGVSRMIRDPDRTSTGSTQSTDKESSPAPRSAIQS
ALPGCPTFVEVKAEVEEEGAFVDLELPFQVAEDGKERDVYGGFPSRADEALKTLAALRQV
LVTQLMSQEATQQNKRSTGPRLLRTTSLRTPVDSCARVMVHNGSEKSSPKLEEAAQDLGS
RDKGFFDSPEDYAGYLMLEGYGGAGESSTDDDILAAAAGKRLRSSRGCTVDSCSNSRFSS
MSQAGSLSSFSKQVLSHLRSLQANLSYLKEVEVKYNNLISQRPEGSTAETDGSKDKR
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccaacttcactgacaggtttcccaagaaagctaacagaaccagc
agcattctcagtaaagaccaccccccagacaagaaacctaaaagtgacaaatcctcactt
agctccaatgagtttgaccctacagaagctctgtcggtgcagaagagtggcagcagcagt
gtgctagcagaaggaaagcctgagtcctgtggtctggtcccgcgatgcgtaataatccag
aaagatgaaaatggctttgggctcactgtcagcggtgacaacccagtgtttgtgcagctt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagataggattatcaag
gttaacgggacccttgttacacactctaatcacatcgaggtggtgaagctcatcaaatct
ggctcctatgtggccctcacagttttgggccgtcctccagggcttacccagatacctcta
tctgaagcagagtcagaaatgttgggtgttagcatttcttctccaagctctccagcaaca
gaacgcccatacagtcctcaggatcgcttctctgcccagccatcatgggatgagaacaac
agtgtctgcaaccagaaggttgactactcggcaaaaatgctctccagagagcaggacctg
caggccatgaaggaggagtacagcaggaaactctccccaaaactactgaaagacacccaa
gaagctaagaaacacattcctcaacagggtcacccttgcaggaccactggtgcaacgcag
gaaccttttcatggtattgatgcagacgatggtagcatgtttgagacggacttctctccc
acctttaaaggagacaacaacacggattcgtcctggaccagcactccaacatcacgtgga
ttcggatgcggatctccagagaaccaccatttaaaagagtcatccttccccagcccaaag
agcacgcccagaagcagcctcaactcctgccactcgccagacgcagaggacgttactgac
ctggattctctttccccaaccacagtcagcagtccctccgtctcccgcgtcatctcccaa
atcattggagctgaagatgattattttgattcagaccaggagcagtcaaacggccagtgt
aacagctttaacagcatcgagcagctcaagtctcggcctgcccacctcgcagccttcctc
caccacgtcatctcccagttcgaccctgctcctgtgctatgctacctctatgctgatttc
tacaagcagaccaactccaaagagaccagacgggtgttcatggacctccacaattttttc
attgaccggggagcaaatttgaaagttcctgttcccgactccatctctgctgatcttgac
cggcgacggacagaactgatcccagaggaaataaacagacagcttgttcaaatgctgcag
gactctctgctccctgacatccagaagaacctcgaggatttcaggcagaagcgcagtatg
ggcctgacagtggcagaggtggagctgtccagactggaccaagagcgaatcagagaccgc
gtcaccttggagcgagaacgctcatatgctgaaaacattattggcaagatagaggacatc
ctgttaactacacagacaacagaggaagagaaatgcactacaatgcagtatgtcatctat
acatacatgaagcaccttggtgtgagggtcaaggaacctcgcagtctggagtccaaacgg
gtccggatcaactttctgcccaagataaagaaaagcataaagacagaaaaggaaggagaa
gagaagaagaaacccagatttcccagtattctcggacctcagcgtcgaccgagccgtatt
gaagctgcaccagtgagcaaggctttggacggccgtccacggcctcagaaacagctgtct
cagcccacgcttggcgccagcgagcacacggaggctggtcgtctcagaggcagccaatca
agcgaagggcccgagctgattcactcaacgtctgtcaacacttcatcccccagcagcaca
gccgtgagctcggacagcagccgagacgccgatgcgagtggtactctgacctcaggcccc
tccaggatgagtgatggccttcaggctgacccactggaagggttgccataccctcccaca
cactttgacctttacagcttggaccaactgcaagaggaggacagagaaagcgacagagct
catgagggaacaccaaaaattattagaagatttgagggaatagttggcgctgatatccag
agcgaggacgaccaagggaccgactccgagcatgaccccccatactggcagcagttggtt
gggcgggaggtcctcgcaggtctgatgcctcaggaaatcaagagacaagaagtcattaat
gaactgctttacaccgagcgagcgcacgtccgaatgctgagagttttggaccaccttttc
taccagagactctccaaagacgccatcctacctcctgctgacattaagaacatctttact
aatctggaagagattttacaactgcacgtttcaatactggagcaaatggcagccgttcgg
aagagaaacgagtcttcagtaattgatcagataggagatgacttgctctcctggttcagc
aggggagaggaggagaagatcaagcgggcagcaggcaccttctgcagtaaccagcctttc
tctttggagatcatcaagacgaagcagaaaaaggactcccgcttcgcatcattcatccag
gaggccgagagtaaccgactgtgtcgccgacttcagcttaaagacatcatccccatagag
atgcagcggctcaccaagtaccctctgctgctggacaacattgcaaaatatacagacaac
acggctgagaaggacaaagtgaagcaggcagcagattgctgtagaaagattctcaatcac
gtcaaccaggctgtgaaggaatcggaggacaagcagcggttagaggactatcagagaaga
ttggatctctcgtctctaaaacagacggacaacccaatgatcctggagttaaagaacttg
gatctaacaaagagaacaatggtgcatgaaggaccgctgtcctggaaaatgaacaaagac
aagactattgaactttacacgctgctcctggaggacatcctggtcctgttacagaaacag
gatgagcgcctcatccttaaatgtcacagcaaaaacctggcgggcaccgcggacaccaaa
cacaccttcagccccatcatcaagctcaacaccgtactggtgcgctccgtggccacagac
aacaagtccttctttgtcctttccatgtcggaaaacggagcccagatctatgagctgatg
gcgcccaccgtctcggatcagatgacgtggcagcgtctcatcacccagagagcagatgcc
attaaagtcaaacctcatagcgtcatcccattacctcagaccgagggggagagagacggt
gtcgagatcattacagcaggtgtttccaggatgattagagacccggaccgcacgtctact
ggcagcacacagtctacagataaagagagcagcccagcccccagaagtgccatccagagt
gccctccctggttgtcctacctttgtggaggtgaaggcggaggtagaagaggagggagca
tttgtggacctggagcttcctttccaagtggctgaagacggcaaagagcgcgacgtgtac
ggcggattcccctcgagagcagacgaagcgctgaaaacattggcggctctgagacaggtg
ttagtgacccagctgatgtcccaggaggccacgcagcagaacaaacgctccacggggccc
cgtctcctcaggaccacctctctgcggaccccagtggacagctgcgcacgcgtgatggtc
cacaatggctcagagaagagcagccccaagctagaggaagcggctcaggacctgggctcc
agagacaaaggcttctttgacagccctgaggactatgcgggatatttgatgctggagggc
tacggcggtgccggggagagcagcacagacgacgacatcctggcggcggcagcagggaag
cgtctgcgctcctcgcgaggctgcaccgtcgactcgtgcagcaattcgagattttcctcc
atgtcgcaggcgggcagcctctcgtctttcagcaagcaggttttgtctcacctccgaagc
cttcaggccaacctcagctatctgaaggaggtggaggttaagtacaacaatctaataagc
caaaggccagaggggtcgacagccgaaacggacggaagcaaagataaaagatag
DBGET
integrated database retrieval system
