Takifugu rubripes (torafugu): 101078302
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Entry
101078302 CDS
T02386
Symbol
kcnma1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
101078302 (kcnma1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tru04040
]
101078302 (kcnma1)
Ion channels [BR:
tru04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
101078302 (kcnma1)
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
101078302
NCBI-ProteinID:
XP_029691637
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Position
4:complement(11486421..11572323)
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AA seq
1307 aa
AA seq
DB search
MLAEADGTVPHGSDSSMRTSNIINKINPDSSILISKMEDVVIPFSSEVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPANNQPAEKKKNPDEK
EEVAPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLK
LLLIAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFYYCKACHDD
ITDPKRIKKCGCKRLIYSKMSVYKRMKLACCFDCGCSEQDCSCMSGSVHSNMDTLQRAYP
LSSVSVHDCATTLRASTYRFNGFVRSSADGATTPGNSGSQKEAGVRFKADCKLVEDEHPS
TLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMDMNVKRYDSTGMFHWCPSK
EIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHFHELKHIVFVG
SLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDASLQDK
ECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPESSPVHGFVRQASVTTGSNIPI
ITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIR
TLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGD
LFCKALKTYNMLCFGIYRLRDAHLSVPSSCTKRYVITNPPYEFELVPTDLIFCLMQFDHN
AGQSRTSLSHSSHSSHSSSKKSSSVHSVPPSNRQNRSTKTREARDKQNATRMNRMGQEKK
WFTDEADNAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcggatggcaccgttccccatggaagcgacagctctatgaggacaagc
aatatcattaataagataaacccggactcttcaatcttaatctccaagatggaagacgtt
gtcatcccgttctcgtctgaggtgccctgtgacaataatggccagcgcatgtggtgggct
ttcctcgcgtcctccatggtgacgtttttcgggggtctcttcatcatcctgctgtggcgg
accctcaagtatctgtggaccgtttgctgccactgcaacatcaaaaacaaggaggctcag
aaggtgaacaaccccgccaacaaccagccagcagagaagaaaaagaatccagatgagaag
gaggaggtggcgccggcgagcgaggtgggatggatgacctcggtcaaagactgggccggt
gtcatgatctctgctcagactctcactgggagagttctggtggtgttggtctttgcactc
agcatcggggcccttgggatctactttatagactcctcagatcccatagaatcctgccag
aacttctacaaagactttacactacagatcgacatggccttcaacgtcttcttccttctt
tactttggcctgcgatttatagcagccaatgataagctgtggttctggctggaggtcaac
tcagtcgtggacttcttcactgttcctcccgtgtttgtctccgtctacttaaacagaagc
tggctgggtttaagattcctgagagcgctgaggttgatacagttctctgaaatcttacag
tttttgaatattttaaaaacaagcaattccatcaagctggtgaacctgtgttctatcttc
atcagcacatggctcacagctgctggtttcatacatctggtggaaaactcaggggatcct
tgggaaaacttccagaattcccagtcactttcctattgggaatgtgtctatttactgatg
gttaccatgtctacagtaggctacggggacgtctatgcaaaaaccaccctgggacgcctg
tttatggtcttcttcatccttggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatattacgctcgaaagtgtctccaacttccttaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccactttacacaagtcgagttctaccag
ggatctgttctcaacccccacgatctggccagagtgaagattgagtcagcagatgcctgc
cttatcctagccaacaagtattgtccagatcccgatgctgaagacgcctccaacatcatg
agggtcatttccatcaagaactaccatcctaaaatccgaattatcacacaaatgctgcag
tatcacaacaaggctcatctgctgaacattccgagctggaactggaaggagggcgatgac
gccatctgcctggcggagctgaaggcagggttcatcgcccagagctgcctggcccagggc
ctgtccaccatgctggccaacctgttctccatgaggtccttcatcgagattgaagaggac
acgtggcagaagtattatctggaaggcgtggctaatgagatgtacacagagtatttgtcc
agtgcctttgtgggcctctctttccccaccatctgtgagctgtgttacgtgaagctgaag
ctgttgctcattgccatcgaatataagtctgagcaaagagagagcagaagccgaaagcgc
atcctcatcaacccggggaaccacgtcaaaatgcaggagggaacactgggattctttatc
gccagtgacgccaaagaagtaaagagagcattttactactgcaaagcttgtcacgacgac
atcaccgaccccaaacggatcaagaagtgcggctgcaaacgactgatttattccaagatg
tccgtctacaaacgaatgaaactggcatgttgttttgattgcggctgttcagagcaagac
tgctcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctaccca
ctttcctctgtctctgttcatgattgcgcaaccactttacgtgcctccacttatagattt
aatggatttgtcagatcatcagcagatggcgctacaacaccagggaacagtggaagccaa
aaagaggctggtgttcgattcaaagctgattgcaagttagtcgaagacgagcatccgtca
accctctcgcccaaaaagaagcagcgcaacggagggatgcggaactcgcccaactgctcg
cccaaaatgatgagccgtcacgaccctcttctcatccccggcaacgagcaaatcgagaac
atggacatgaacgtgaagcgctacgactccactgggatgtttcactggtgcccgtcaaag
gagatcgaaaaagtcatcctgactcggagcgaagcctctatgacggtgctgagcggccat
gtggtggtctgtatatttggggatgtcacgtctgctttggtggggctgcgaaacctggtg
atgcctttaagagccagtaacttccacttccacgagctaaagcatatagttttcgtgggc
tccttagattatctgcggagagaatgggaaaccctgcacaacttccccaaagtctccatc
ctaccggggacgccgttaagtcgggcagatttgagggctgtcaacatcaacctctgcgac
atgtgcgtaatcctgtcagccaatcagaacaatatcgaagacgcctcgctgcaggacaag
gaatgcatcttggcatcactcaacatcaagtctatgcagtttgatgacagcatcggggtc
ttacaggctaattcccaaggtttcacgccccctggaatggaccggtcatctccagaaagc
agtccagtacatggcttcgtgcgccaggcttccgtcaccacgggctccaacatccccatc
atcacagaactcgtcaacgactccaacgttcagttcctggaccaggacgacgatgacgac
ccggacacagagctgtacctcactcagcccttcgcctgcggcaccgccttcgctgtcagc
gtgctcgactccctcatgagcgcgacgtacttcaatgacaacatcctgacgttgatccgg
acgctggtgacgggaggagccacaccagagctggaggccctgctggcggaggagaacgcc
ctgcgaggaggctacagcacgccgcagacgctggccaacagagacaggtgccgcgtggcc
cagctggccctctatgacgggccctttgctgacttgggggatgggggttgctatggagat
ttgttctgtaaggctctgaagacctacaacatgctgtgttttggaatctacagattaaga
gacgctcacctcagtgttcccagctcgtgtacaaaacggtacgtgatcacaaacccgccg
tacgagttcgagctcgtgcccaccgacctgatcttctgcctcatgcagttcgaccacaac
gcgggccagtcccggacgagcctgtcccactcctctcactcctcccattcctccagcaaa
aagagctcctccgtccactccgtcccaccctccaaccggcagaaccgcagcactaagacc
cgggaagcccgcgacaaacagaatgcaacaaggatgaatagaatgggccaagaaaagaaa
tggtttacagatgaagcggacaatgcctacccccggaacattcagatcaagcccatgagc
actcacatggccaaccaagtcaaccaatacaaatccaccagtagtctgattccaccgatc
agagaggtcgaggatgaatgctga
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