KEGG   Takifugu rubripes (torafugu): 101078550
Entry
101078550         CDS       T02386                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03420  Nucleotide excision repair
tru04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101078550 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101078550 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tru04121]
    101078550 (cul4b)
   03400 DNA repair and recombination proteins [BR:tru03400]
    101078550 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tru04147]
    101078550 (cul4b)
Ubiquitin system [BR:tru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     101078550 (cul4b)
DNA repair and recombination proteins [BR:tru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101078550 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101078550 (cul4b)
Exosome [BR:tru04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101078550 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 101078550
NCBI-ProteinID: XP_003970600
Ensembl: ENSTRUG00000009785
LinkDB
Position
14:10644722..10652467
AA seq 862 aa
MFPTGLSSPNPPPPPTQEARTASTDVKGDSGNITSPKKRKINGSEREDTADPIPPSPSKS
LTSSSSSTSGAPLHIQKKLRFEDSVDFIGLDVKMAEDAAAAAATCSNNKSKAAFLSAGVG
HHANGLTKTAGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAIQNST
SIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLFLKKIDK
CWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDVKVQSKTIDGIL
LLIERERNGEAIDRSLLRSLLSMLSDLQIYQESFEQRFLEETNRLYAAEGQRLMQEREVP
EYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDENRIL
DLSLLYQLFSRVRSGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDCIID
ICFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIM
IIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKD
MELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTF
YLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLAT
GIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKET
VEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKRIE
SLIDRDYMERDKENSNQYNYVA
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
actgcgtctactgatgtcaaaggcgacagtggtaacattacatctccgaagaagcggaaa
ataaacggctccgagagggaagacactgctgaccccatccctccttcgccctccaagagc
ctgacttcgtcgtcgtcttccacctccggcgccccgctgcacatccagaagaagttgagg
ttcgaggattcggtggattttattggactggatgtgaaaatggctgaggatgctgctgcc
gccgctgctacctgctccaataacaaaagcaaagccgccttcctgtcggccggcgtggga
caccatgcgaacggactgacgaagaccgcgggctccgccaccttctccaacagtaaaccc
ggtgctgccaaaaaactagtcatcaagaacttcaaagaaaaacccaaattgcccgagaac
tacacacaagagacctggcagaagctgaaggaggcggtggaggccatacagaacagcaca
tccatcaagtacaatctggaagagctctaccaggctgtggagaacctctgctcccataag
atatccgccaagctttacaaacagctgagggccgtgtgtgaagaccacatcaaggctcag
atcgatcagttcagagaggacgctcttgacagtgtgctgttcctgaagaaaattgacaag
tgctggcaggaccactgcaggcaaatgataatgataaggagtatttttttatttttggat
cgcacctatgttctacaaaactcgatgctgccgtcaatctgggacatgggtctggagctc
ttcaggttttacatcatcagtgacgtgaaggtccagagtaaaaccatcgatgggattctc
ttgctgatcgagcgggagcgaaacggagaagcaatagatcgcagcttgctgaggagcctg
ctgagcatgctctctgacctgcagatctatcaggagtcttttgagcaacgctttttggag
gaaaccaatcgcctgtacgcagcagagggacagaggctgatgcaagagagagaggtacca
gaatacctccatcatgtcaacaagcgcttggaagaggaggctgacagggtcatcacatat
ctagaccagagcacacaaaaacctctgatcgccactgttgagaaacagttgctgggtgaa
catctgacagctactctgcagaaaggtttgactcatcttctggacgagaacagaattctg
gatctctctcttctgtatcagctcttcagtcgagtgaggagcggcgttcaagtgttgctg
caacactggatagaatatataaaggcttttggaagcacaattgtaatcaatccagaaaag
gacaaaacgatggtgcaggagttgctggattttaaagacaaggtggattgcatcatcgac
atctgcttcatgaaaaatgagaagttcgtcaatgccatgaaggaggcgttcgagacgttc
attaacaaacggccgaataagccagcggagctcatagcaaaacatgtggattcaaagctt
agagcaggaaacaaagaggccacagatgaggagctggagaaaatgctggataagatcatg
attatctttcgattcatatatggaaaagatgtcttcgaggccttttacaagaaggatctg
gccaagaggttgcttgttggaaaaagtgcttctgtggacgccgagaaatcgatgctctca
aagctgaagcatgaatgtggagctgcgttcaccagcaaactggaaggcatgtttaaggac
atggagctttccaaagacataatggtgcagttcaaacagtacatgcagtgccaaaacatt
cctggcaacatcgagctgacagtgaacatcctcactatgggctactggccaacatatgtc
cccatggaggtgcacctgcctcctgagatggtgcgactgcaggagatcttcaagacattt
tacctgggcaaacacagcggcaggaagcttcagtggcagtcgacccttggccattgtgtt
ctgaaagccgagtttaaagagggcaaaaaggagctgcaggtgtctcttttccagacgttg
gtgctgctgatgtttaacgaaggggaagagttcaccctggaggagatcaaactggcaaca
gggatcgaggacagcgaactgcgtcggactctccagtcgctcgcttgtgggaaagcgcgc
gtactcaccaaaattccaaagagcaaagacgtggaggatggagacaagttttcttgcaac
gacgacttcaaacacaagcttttccggatcaagatcaaccagatccagatgaaagaaacg
gtggaggagcaagccagcaccacagaacgagtctttcaggaccgtcagtatcagatcgat
gccgccatcgtacgaatcatgaagatgaggaagactctgagccataatcttttgatgtct
gaagtgtacaaccagctcaagtttcctgtcaagcctgccgacctgaagaaaagaatagag
tctcttattgacagggactatatggagcgagacaaagagaactccaaccagtacaactac
gtggcttaa

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