Takifugu rubripes (torafugu): 101078550
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Entry
101078550 CDS
T02386
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03420
Nucleotide excision repair
tru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101078550 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
101078550 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101078550 (cul4b)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101078550 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tru04147
]
101078550 (cul4b)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
101078550 (cul4b)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101078550 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
101078550 (cul4b)
Exosome [BR:
tru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101078550 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
101078550
NCBI-ProteinID:
XP_003970600
Ensembl:
ENSTRUG00000009785
LinkDB
All DBs
Position
14:10644722..10652467
Genome browser
AA seq
862 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARTASTDVKGDSGNITSPKKRKINGSEREDTADPIPPSPSKS
LTSSSSSTSGAPLHIQKKLRFEDSVDFIGLDVKMAEDAAAAAATCSNNKSKAAFLSAGVG
HHANGLTKTAGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAIQNST
SIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLFLKKIDK
CWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDVKVQSKTIDGIL
LLIERERNGEAIDRSLLRSLLSMLSDLQIYQESFEQRFLEETNRLYAAEGQRLMQEREVP
EYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDENRIL
DLSLLYQLFSRVRSGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDCIID
ICFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIM
IIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKD
MELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTF
YLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLAT
GIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKET
VEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKRIE
SLIDRDYMERDKENSNQYNYVA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
actgcgtctactgatgtcaaaggcgacagtggtaacattacatctccgaagaagcggaaa
ataaacggctccgagagggaagacactgctgaccccatccctccttcgccctccaagagc
ctgacttcgtcgtcgtcttccacctccggcgccccgctgcacatccagaagaagttgagg
ttcgaggattcggtggattttattggactggatgtgaaaatggctgaggatgctgctgcc
gccgctgctacctgctccaataacaaaagcaaagccgccttcctgtcggccggcgtggga
caccatgcgaacggactgacgaagaccgcgggctccgccaccttctccaacagtaaaccc
ggtgctgccaaaaaactagtcatcaagaacttcaaagaaaaacccaaattgcccgagaac
tacacacaagagacctggcagaagctgaaggaggcggtggaggccatacagaacagcaca
tccatcaagtacaatctggaagagctctaccaggctgtggagaacctctgctcccataag
atatccgccaagctttacaaacagctgagggccgtgtgtgaagaccacatcaaggctcag
atcgatcagttcagagaggacgctcttgacagtgtgctgttcctgaagaaaattgacaag
tgctggcaggaccactgcaggcaaatgataatgataaggagtatttttttatttttggat
cgcacctatgttctacaaaactcgatgctgccgtcaatctgggacatgggtctggagctc
ttcaggttttacatcatcagtgacgtgaaggtccagagtaaaaccatcgatgggattctc
ttgctgatcgagcgggagcgaaacggagaagcaatagatcgcagcttgctgaggagcctg
ctgagcatgctctctgacctgcagatctatcaggagtcttttgagcaacgctttttggag
gaaaccaatcgcctgtacgcagcagagggacagaggctgatgcaagagagagaggtacca
gaatacctccatcatgtcaacaagcgcttggaagaggaggctgacagggtcatcacatat
ctagaccagagcacacaaaaacctctgatcgccactgttgagaaacagttgctgggtgaa
catctgacagctactctgcagaaaggtttgactcatcttctggacgagaacagaattctg
gatctctctcttctgtatcagctcttcagtcgagtgaggagcggcgttcaagtgttgctg
caacactggatagaatatataaaggcttttggaagcacaattgtaatcaatccagaaaag
gacaaaacgatggtgcaggagttgctggattttaaagacaaggtggattgcatcatcgac
atctgcttcatgaaaaatgagaagttcgtcaatgccatgaaggaggcgttcgagacgttc
attaacaaacggccgaataagccagcggagctcatagcaaaacatgtggattcaaagctt
agagcaggaaacaaagaggccacagatgaggagctggagaaaatgctggataagatcatg
attatctttcgattcatatatggaaaagatgtcttcgaggccttttacaagaaggatctg
gccaagaggttgcttgttggaaaaagtgcttctgtggacgccgagaaatcgatgctctca
aagctgaagcatgaatgtggagctgcgttcaccagcaaactggaaggcatgtttaaggac
atggagctttccaaagacataatggtgcagttcaaacagtacatgcagtgccaaaacatt
cctggcaacatcgagctgacagtgaacatcctcactatgggctactggccaacatatgtc
cccatggaggtgcacctgcctcctgagatggtgcgactgcaggagatcttcaagacattt
tacctgggcaaacacagcggcaggaagcttcagtggcagtcgacccttggccattgtgtt
ctgaaagccgagtttaaagagggcaaaaaggagctgcaggtgtctcttttccagacgttg
gtgctgctgatgtttaacgaaggggaagagttcaccctggaggagatcaaactggcaaca
gggatcgaggacagcgaactgcgtcggactctccagtcgctcgcttgtgggaaagcgcgc
gtactcaccaaaattccaaagagcaaagacgtggaggatggagacaagttttcttgcaac
gacgacttcaaacacaagcttttccggatcaagatcaaccagatccagatgaaagaaacg
gtggaggagcaagccagcaccacagaacgagtctttcaggaccgtcagtatcagatcgat
gccgccatcgtacgaatcatgaagatgaggaagactctgagccataatcttttgatgtct
gaagtgtacaaccagctcaagtttcctgtcaagcctgccgacctgaagaaaagaatagag
tctcttattgacagggactatatggagcgagacaaagagaactccaaccagtacaactac
gtggcttaa
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