Takifugu rubripes (torafugu): 101078700
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Entry
101078700 CDS
T02386
Symbol
acan
Name
(RefSeq) aggrecan core protein isoform X5
KO
K06792
aggrecan 1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tru00535
]
101078700 (acan)
00536 Glycosaminoglycan binding proteins [BR:
tru00536
]
101078700 (acan)
04091 Lectins [BR:
tru04091
]
101078700 (acan)
Proteoglycans [BR:
tru00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
101078700 (acan)
Glycosaminoglycan binding proteins [BR:
tru00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
101078700 (acan)
Lectins [BR:
tru04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
101078700 (acan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
101078700
NCBI-ProteinID:
XP_011608117
Ensembl:
ENSTRUG00000012986
LinkDB
All DBs
Position
13:complement(11688641..11700705)
Genome browser
AA seq
1506 aa
AA seq
DB search
MLKWVVSLTLCLHVISASFDYVYDEHSLMDPEDVLSVSIPLEGPQRPLLGGTIVLPCYFE
DHTIPDPGAPTIAPLSHRIKWSHVTKDKVTTILVVLEGQVRIAEGYLDRVHLLGYPATPT
DASIKLSELRSSDSGVYRCEVQHGIEDNHDIVHVHVQGLVFHYRAIMGRYTLTFEKATAA
CGQNSAVVASAEQLQAAFDDGFHQCDAGWLSDHTVRYPIHDPRVNCYGDKEELPGVRTYG
VRDLNETYDVYCFTEKMTGRVFHTTSAEKFTFSEAVVACSKRRAQLANTGQLYLAWQGGM
DVCNAGWLGDRSVRYPINIRRPQCGGGLLGVRTVYLYTNQTGYPLPESRYDAFCYTESFE
VEGSGFDEEGTDVLSVTKVTQSPEVFFKTTTTESEAVGEVETQQPTAVDFTFTESPTQMP
LPQPPNDTELIEAVTAQPDSGREINKGFVMTRTGVVFHYRSGSSRYAFTYIEAQRACQSV
GAYIATAAQLQAAYEAGYHQCDAGWLIDQTVRYPITSPRDKCAGDLDGQPGVRSYGLRPA
DERYDVYCYIDGLKGEVFHVGSAEGFTYDEAASSCQEQGAVLASTGELHAAWRTGFDKCR
AGWLMDRSVRYPINNPRSECGGGRLGVHTVYAQPEQTSFPSLDSKYDAYCFRVDLLIIAN
ETGLNITDIQEAILLKPIGSPLLPPIIVETSGSGSADFGSGSAKGGDFSSSGDQSGSGDQ
AISGDQSGSGDQAISGDQSGSGDQAISGDQSGSGDQAISGDQSGSGDQAISGDQSGSGDQ
AISGDQSGSGDQAISGDQSGSGDQAISGDQSGSGDQAISGDQSGSGDQAISGDQSGSGDQ
AISGDQSGSGDISGSGDQVTSGDLSGSGDISGTGGRIISADVSGSGDMAGSPSAEQPSGA
SGLSSTDDSGSAVDADGSGLNVVFSGMDSILSADGSVSGGPQEAEEGSTVILNIPLSETG
SGVLSGSGDISGSGFSSFESGSSIDTSGESGQFSGISSGFINNQDLSEFSGLPSGFASGS
ASGHSGTSSGSGDTQILLIDGELIDESISVTQREYELGGGLLEFSGSGDISGSGILSGDH
SGSTSGSGSGFFSRVTFVGSGFTELIGSASGEQETLGSLLYSGENLSGSGISTFISGSGS
GTDSGFDSSTNEEGSVTFLTEDLLTESSGDTSLSLELGEGSVEYSGEGSSGSSGLYSGSG
DSRMFTGSGTASGLSSGDLPQLLLPSPTSEWALTEGTTRPAEALGEAVLSQVSSGMYATH
SSVLAPAGLAAPATAATPASAGAPGIAKETKLLQDEQQCEEGWTKFQGNCYLHFSDRETW
LEAEQRCRDLNAHLASIITPEEQAFVNANAQNYQWIGLNDRTVQNDFRWTDGTPLQYENW
RPNQPDNYFSSGEDCVVMIWHERGQWNDVPCNYHLPFTCKKGPVSCGAPPEVENAHMFGN
RREEYPVNSIIRYQCNPGFTQRHPPVVRCKGDGQWEKPQVECTDVNARRRIRQRSRRGVA
RNGNLY
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtgggtcgtgtcgctgactttgtgtctacatgtcatctcagcatcattcgat
tatgtttatgatgagcattccttaatggaccctgaagatgtgctcagtgtcagtattcct
ctggagggaccacagcgtcccctacttggaggaacaatagttctaccatgttattttgag
gaccacacgattccggaccctggggctcccaccatcgcgcccctttcccatcgcatcaaa
tggagccatgtgaccaaagataaagtcacaactatcctcgtagtcttggaaggacaggtc
cgtattgccgagggatatttggaccgagttcacctgctgggctaccctgctactcctaca
gatgctagcataaagttatctgagctgagatctagcgactctggggtctaccgctgtgag
gttcaacatggcatcgaggacaaccatgacatcgttcatgtgcacgttcaaggactcgta
ttccattaccgggccatcatggggcgctatactttgaccttcgaaaaggcgacagcagcc
tgtggccagaacagcgctgtggtggcttcagcggaacagctccaagcagcctttgacgat
ggattccaccagtgtgatgctggttggctctcagaccacactgtcaggtatcccatccat
gatcctcgtgtcaactgctatggtgataaagaagagctccctggggtccgaacatatgga
gtgagggaccttaacgaaacatatgacgtctactgtttcactgaaaagatgacagggaga
gttttccacactacctctgctgaaaagttcaccttctctgaggctgtcgtggcatgctct
aaaagaagagcgcagctggccaacactggtcaactgtacttggcctggcagggtgggatg
gacgtctgtaacgccggctggctgggagacaggagtgtccgttatcccatcaacatccgc
cggccccagtgcgggggtggtcttctgggggtgcggactgtttacttgtacacaaatcaa
actggatacccacttcctgagtcccgttatgatgccttctgctacacagaatcatttgag
gtggagggttcagggttcgatgaagaaggcaccgatgtgctgagtgttaccaaagtgacg
cagagtccggaggtgttcttcaagactacgaccacagagagtgaggcggtaggagaggtg
gagactcagcagccaactgccgtggacttcaccttcacagagagccccacacaaatgccc
ctgcctcagccgccaaatgatacagagctaatagaggcggttactgcacagcctgactct
ggcagggagatcaacaaaggatttgtgatgactcgcaccggagtggtgttccattatcgt
tcaggctcaagccgctatgcctttacctacatcgaggcccagcgggcttgtcagagtgtt
ggagcctacattgccacagcagcacagctgcaggcagcatatgaagcaggataccaccag
tgtgacgcaggatggttgattgaccagactgtcaggtatccaattacttccccccgcgat
aaatgcgctggagatttggacgggcagcctggagttcggtcctatggtttgagaccagcc
gatgagagatatgatgtatactgctacattgatggtctgaaaggtgaggttttccacgtg
ggatcggctgagggtttcacttatgatgaagctgcttcgagctgtcaagaacaaggcgct
gtactggcgtccaccggtgagctccatgccgcctggagaactggctttgacaagtgccgt
gccggctggctaatggatcgtagtgtccggtatccaatcaacaatccccgttctgagtgt
gggggtgggaggctgggagtgcacaccgtgtatgctcagcctgagcagacaagcttccca
tcgctggattccaaatacgatgcttactgcttcagggtggaccttctgatcattgcaaat
gaaactggactgaacatcacagatattcaagaggccatccttttgaagcccattgggtct
ccgctccttccccctatcatcgtggagacctcaggctcaggttcagctgattttggctca
ggttctgccaaaggaggtgatttttcttcctctggagatcagtctggttctggagaccaa
gcaatatcaggcgatcagtctggttctggagaccaggcaatatcaggcgatcagtctggt
tctggagatcaggcaatatcaggcgatcagtctggttctggagaccaggcaatatcaggc
gatcagtctggttctggagatcaggcaatatcaggcgatcagtctggttctggagaccag
gcaatatcaggcgatcagtctggttctggagatcaggcaatatcaggcgatcagtctggt
tctggagaccaagcaatatcaggcgatcagtctggttctggagatcaggcaatatcaggt
gatcagtctggttctggagaccaggcaatatcaggcgatcagtctggttctggagaccag
gcaatatcaggcgatcagtctggttctggagacatatctgggtctggagaccaggtaacc
tccggagatctgtctggttctggagacatatctggaactggaggcaggataatctctgca
gatgtgtctggctctggagacatggctggcagtccaagtgctgagcaaccaagtggggca
tcaggtttgagcagcacagatgattctgggtcggctgttgatgcagatggatccggactg
aatgttgtgttttcaggtatggacagcattttatctgcagatggctcagtttcaggagga
ccccaagaagctgaagaggggagcacagtaatcctaaacatccctttgtctgaaactgga
tctggtgtactgagtggcagtggggacatatctggatccggtttcagttccttcgagagt
ggctcctctattgacacctctggagaaagtggacaattttctggaatatcatctggtttt
attaacaaccaggacctttcagagttcagtggtctcccatcaggatttgcttctggaagt
gcaagtggacattcaggaacatcttctggaagtggagacactcagatcttacttatagat
ggtgagctgattgatgagtccatatctgtcacccagagagagtatgagcttggtggtggc
ctactggagttcagtggctctggcgacatttcaggatctgggattctgagtggagatcat
agtggttcaacctctggaagtggctcggggttcttctcacgtgtgacatttgtagggtca
ggattcactgaactgatagggtcagcctctggagagcaggaaaccttggggtccttgctc
tacagtggtgaaaatttgtctgggtctggaatctcaacatttatctctggatctggatca
ggaacagactcaggattcgactcttcgacaaatgaagaaggcagcgttacctttttgaca
gaggatcttttgacagaatcatctggagacacatccctgtctttggagcttggagaggga
tcggtggagtacagcggggaaggaagcagcggcagcagtggtctctactctggcagtggg
gatagccgcatgttcacaggcagtggaactgcatctggactttcctctggagatcttcca
cagctgctgcttccctctccaacctctgagtgggcactgactgagggaaccaccagacca
gcagaggcacttggcgaagccgtcctgtcccaagtctcaagtgggatgtatgcaactcac
agctcggtgttagctcctgcaggtctggctgctcctgccaccgcggccacaccagcttct
gctggggcccccggcatagcaaaagagacaaaactgctgcaggatgagcaacagtgtgaa
gaaggctggactaagtttcaggggaactgctacctgcacttctctgacagagagacgtgg
ctggaggcagagcagcgctgccgtgacctgaacgcacatctggccagcatcatcactcca
gaggagcaagcgtttgttaacgcaaatgcccagaattaccagtggatcgggctgaatgac
aggacggtccagaacgatttccgctggacagacggcactccactgcaatatgagaactgg
aggccaaaccaaccagataattacttcagctctggcgaagactgtgtggtgatgatctgg
catgagaggggtcaatggaacgatgtgccctgtaactaccatctgcccttcacctgcaaa
aaaggcccagtgtcctgcggagccccaccagaggtggagaatgcgcacatgtttggtaac
agaagggaggaataccctgttaattccatcatccgctatcagtgcaaccccggcttcaca
cagcgccacccacctgtggtccgctgtaaaggagatgggcagtgggagaagcctcaggtg
gaatgtactgatgtgaatgccagacgaagaatacgtcaaaggagcaggagaggcgtggca
agaaatggcaatctctactaa
DBGET
integrated database retrieval system