Takifugu rubripes (torafugu): 101078908
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Entry
101078908 CDS
T02386
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03440
Homologous recombination
tru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101078908
03460 Fanconi anemia pathway
101078908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tru03032
]
101078908
03400 DNA repair and recombination proteins [BR:
tru03400
]
101078908
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
101078908
DNA replication proteins [BR:
tru03032
]
Eukaryotic type
DNA Topoisomerases
101078908
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
101078908
FA (Fanconi anemia) pathway
101078908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
101078908
NCBI-ProteinID:
XP_029688056
Ensembl:
ENSTRUG00000006332
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MIRNRAQIKRVLCVAEKNDAAKGISDIMSNGRFRRREGMSKFNKIYEYEYHLFGQNVTVL
MTSVSGHLLGLEFKTPFQKWHSCSPVLLFDAEVEKYCPENMVQIKRTLEKEVKQCQLLII
WTDCDREGENIGFEIIDVCKAVKPNIQVLRAKFSEITPNSIRRACDTLSEPDSKVSDAVD
VRQELDLRIGASFTRFQTLRLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQSFIPE
TFYKIKVLHEVEEDTVEFSWKRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPL
PLDTVEMEKLASRKLRISAKETMKIAEKLYTRGFISYPRTETNIFPPNLALGPLVEEQTQ
SSVWGAFAQRVLEQPGGPNPRQGKKSDQAHPPIHPTKHSSSLQGNEGRLYEFIVRHFLAC
VSQDALGQETVVDVDIAQEKFSTSGLMITARNYLDVYPYDRWTTKLIPVYEQGSQFQPTA
IEMVDGQTSPPQLLTEADLIALMEKHGIGTDATHAEHIETIKSRMYVGLTSDQRFLPGEL
GMGLVEGYNSMGYEMSKPNLRAELEADLKLVSEGRKDKWSVLQHHIQKYKTVFIESVHKA
KKLDEALSPYLGAAQEIPEEQQQDMEIPLPIRKCPHCGRDMVLKKKREGNGKYLTCVGYP
ACKTAVWFPDMVLEVSRDQSICPTCRPAPVHMLKLKFRRGSLPPMMPLEFVGCIGGCDET
LREVLDLKYLRAGGSGGSGGGRGDGPHPPAPPPPRAPSSNARPSLPPVPTVVPQPQPPPR
ALSVSASSDSNTIVCNCGQQALLLTVRKDGPNQGRQFYKCNGGTCGFFLWADQPGQQGAS
QSWGAPLQVSQPPRTTVNSANAGQTMCHCNETAVMRTVQKDGPNKGRMFHTCGKSREQQC
GFFQWADENTPPSGAFDGGYNGGGNGGRQARRITGAATTPTNPPLPRGRARVASATPQDT
LVPTCPPAMTHPSVNFGGHVITPEGVNCVGKRLQGVGGGGHA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgatccggaaccgagcccagatcaaacgggtcctctgtgtggcggagaagaacgatgca
gccaaaggcatttcagatatcatgtccaatggcagattcaggaggagagaagggatgtca
aagtttaataagatctacgagtacgaataccatctctttggtcagaatgtgacagtccta
atgacatcagtgtcaggccacctactagggctggagttcaaaacaccctttcagaaatgg
cacagctgcagtcctgttcttttatttgacgcagaggtagagaagtattgtccagaaaac
atggtacaaatcaagcggacacttgagaaagaggtgaagcagtgtcagctgttaatcatc
tggaccgactgtgacagagagggggaaaatattggctttgaaatcatagatgtctgcaaa
gcagttaagcccaacatacaggtccttcgtgcaaagttttctgaaatcacccccaactct
attcggagagcttgtgacactctatcagagccagattctaaagtcagtgatgctgtcgat
gttcgtcaggagctggacttgaggataggtgcgtcttttactcgattccagacactccgc
ctgcagaagatctttccagagtctctggccaatcaactgatctcctatggcagctgtcag
tttcctactttgggtttcgtggtggagcgctttaaagccatccagtctttcatacctgag
acattctataagattaaagtgcttcatgaggtagaggaggacactgttgaatttagttgg
aaaagaaatcgtctcttcaaccacacagcttgcctggtgctctaccagatttgcatggag
gatcccatagcaacagtcacctcagtaaccagcaaaccaaagagcaaatggagaccgctg
ccgttggacaccgtggagatggaaaaactggcatctcgtaagctgagaataagtgccaaa
gagaccatgaaaattgcagaaaaactctatacgcgaggcttcatcagctaccctcgtact
gagaccaacattttccccccgaacctggccctcggacccctggtggaggagcagacacaa
agctccgtatggggggcatttgcacagagggtactagagcagcctgggggccccaaccca
cgacagggcaagaaatctgaccaagcccacccccccatacaccccaccaagcacagcagt
tcattacaaggcaatgaagggcgtttgtacgagtttattgtgcggcacttcctggcctgt
gtatcccaggatgctttggggcaggaaacggtggtggacgtagacatcgcccaggagaaa
ttttcaacatcaggactcatgatcaccgcaaggaactaccttgatgtttacccgtatgac
agatggactacaaagctgattccagtgtacgagcaaggctcccagttccagcccacagct
atcgagatggtggatggacagacgagtcctccgcagctgcttactgaagctgacctgata
gcattaatggagaagcacggcatcggcacggatgcaacccatgcagagcacattgagacc
atcaagagtcgaatgtatgtaggcttgacatctgaccagagattcctacctggagaactg
ggcatggggctcgtggaaggttacaactccatgggttatgagatgtccaagcctaacttg
cgggctgagctggaggcagacctgaagcttgtgtctgagggcaggaaggacaaatggagc
gtgctgcagcaccacatccagaaatacaagactgtcttcatcgagtcggtccacaaggca
aagaagttagatgaagcgctgtcaccctatctgggcgcagctcaggagatcccagaggaa
caacagcaggacatggagatccccctgcccatcaggaagtgtccccactgtgggcgggac
atggtcctgaagaagaaaagggaaggaaatggtaaatatctaacctgtgtgggctaccca
gcctgcaagaccgctgtttggttccctgacatggtgctggaggtcagcagagaccagtcc
atctgtcccacctgtcggccagctcctgttcacatgttgaaactcaagttccgtcgagga
agcctccctcccatgatgcctttagagtttgttggctgcatcggcggatgtgatgagacg
ctcagagaggtgctggacctgaaatacctcagagcagggggatctggagggagcggcgga
gggagaggagatgggcctcatccaccagctccaccaccaccaagagccccaagttccaac
gctcgcccttccctgccccctgtccccaccgtggtgccgcagccacaacctccgccgcga
gctctcagcgtcagcgccagctccgacagtaacaccatcgtgtgtaactgtgggcagcag
gcgctcctcttgaccgtgcgcaaagatggtccaaaccaaggacgccagttctacaaatgc
aatggcgggacatgcggtttcttcctgtgggccgatcagccaggtcagcagggggcatcg
cagagctggggcgcacctctgcaggtctcccagcctcccaggaccacagtcaactctgca
aacgcgggacaaaccatgtgtcactgtaatgagacagcagtgatgcgcacggtgcagaag
gatggtcccaacaaaggaaggatgttccacacctgcgggaaatcaagagagcagcagtgt
ggcttcttccagtgggcggatgaaaacacacctccctcaggtgcctttgatggcggatat
aacggcggtggaaacggggggagacaggcgagaagaataacaggagctgccaccacgccg
acaaaccccccgctgccaagaggccgcgcacgtgtggcatctgccacaccccaggacaca
ctcgtgcccacctgccccccagcgatgacacatccctctgtcaacttcgggggacacgtc
atcacaccggaaggtgtaaattgcgttgggaaacggctgcagggtgttggtggggggggt
catgcataa
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