KEGG   Takifugu rubripes (torafugu): 101078995
Entry
101078995         CDS       T02386                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03020  RNA polymerase
tru03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101078995 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101078995 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tru03021]
    101078995 (polr2d)
   03400 DNA repair and recombination proteins [BR:tru03400]
    101078995 (polr2d)
Transcription machinery [BR:tru03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101078995 (polr2d)
DNA repair and recombination proteins [BR:tru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101078995 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 101078995
NCBI-ProteinID: XP_003968833
Ensembl: ENSTRUG00000004740
UniProt: H2SFV1
LinkDB
Position
11:15993917..15995600
AA seq 142 aa
MAAPGGTVPVGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIAAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLEG
RFEDDELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggctccaggcgggacggttcctgtcggggatgttgaagaagatgcgtctcagctg
cttttccctaaagagttcgagaacgcagaaacgctgctcaactcggaggtccacatgttg
ctggagcaccggaagcagcagaacgagagcgctgaagacgagcaggaactctccgaggtc
ttcatgaagaccctgaactacacggcccgattcagccgcttcaagaaccgagagaccatc
gctgccgtgcgcagtctcctcctgcagaaaaagctccacaagtttgaattggccagttta
gctaatttgtgtcctgaagctgccgaagaggccaaagccctgattcccagtttggagggt
cggtttgaggacgatgagctgcaacagatcctggatgacatccagaccaagaggagcttc
cagtactga

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