Takifugu rubripes (torafugu): 101079062
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Entry
101079062 CDS
T02386
Symbol
frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101079062 (frem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tru04091
]
101079062 (frem1)
Lectins [BR:
tru04091
]
C-Type lectins
Lecticans
101079062 (frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
UL45
Motif
Other DBs
NCBI-GeneID:
101079062
NCBI-ProteinID:
XP_011604754
Ensembl:
ENSTRUG00000006301
UniProt:
H2SSK9
LinkDB
All DBs
Position
8:complement(10541099..10553982)
Genome browser
AA seq
2181 aa
AA seq
DB search
MAPQRLIWTLFPVVLLGLGSSSHTSLLKVNKGLKVKRGQTAFLQEGDLQFNIPRQKDACK
LEVVLNEPITQRVGKLLPQVFDCHYLSDEVKYVHNGCPLLQEDTVQLRLYRFTETETHME
VFSIHVDIVQPDCSIIKLGPKSLKVPEFYSLSDAVDGNVVSFHYEKRSSLQCSILLSSQD
THFPAHGQLVTGEPEEATKRGDEPESFVPLRQQLDNKARAMCRSEDCLKGLKLVKFTKIP
CDQFLMMGLRYQHTDPPSPDKDYITIKLELKDVRSGSIYRSEQVWIPVQIVSAMPNQPPK
PSFMSMFILEVDQFILTPLSTATVDAEDEETPQQLLVFNITKPPTHGFITHLSDHTRPVS
SFTWLDLNDMLIGYQPPNSSHSQRQNYEVEFEVHDLFFERSPSITVHMSVRNADTNAPRV
SWNMGLSLLEGQSRPITWEQLQIVDNDNLNAVRLITLDGLQHGRLTVRGGKGFMFTVSDI
KAGVVRYHHDDSDTTKDFIIFRISDGQHQTRHKFPIKVLPKDDSPPFLITNMLLEVSEGQ
TVLLRGSTLQASDMDSSDDYILFNITRPPQAGEIMKVPGPGLTGYPVSQFLQKDLFQSII
YYRHLGNEVFDDSFEVVLSDFHDPPNFSESQVVMVYIEPVPDQPPKEAPGSSRCLVIRET
DVVHITRQELQFVDEESPDSELTYTVTSPPFYSSSHSSHSSDAGRLFLVDSIPKFHKDPT
APVLRLFTQHAVNFMKVAYMPPILDIGPNPQHIQMILSVTNHLGRTVTGICFNITVMPVD
NQPPQVVTHALIVDEGRESPLSSQNLLLSDMDSREEVLQVQLKTGPQHGSLRIGPLPLEN
GGFFTVKDLKSLKMRYSHDGSETLEDNIEFMATDGTNSITFILKVKVNPINDEVPVVAPG
LKPVLSCPEGQEILITTEFLYATDADTINSSLLFLIARQPHHGVVLRKDSIVDRFIQADV
AAGIISYKHMGQEIGLTPRHDTITFVISDEESGSGGVTAESRKRAELRNSLPVYDLHVTV
FPVDSQPPSLTAGEVFSVEEGGVATITASHLRASDVDTALDKLVVSLTYPPQFGYIENVL
PSPGFEKSNTGISIASFSYRDIINGHVNYVQSRHQRVEPTADQFKLYVSDGQRTSAHVPF
YIIIKPTNDEIPEFVAHNITVEEGEKKQLDLSILQVMDLDVPENKLQFSVLKAPKHGSIV
SYSADRLNTKRREAPIADFTLQDLQNGMDVMYVHDDSENMEDSFILQLTDGRHQLDREVM
VRVEPVNDEKPQLVRNNGLEVEPGETRLISSVVLLAQDADTLSTDVIYMIQSVPKQGVLQ
LKEAQDWVTLRVGSNCSQEGVNMNLLRYVHTGADDTKALDFFVFCLFDGKNQSPPQHFYI
SIKELEKGIISIFVKPVKVSRGDRVVLTTDVLLATDGSDKPEELLYVVTTPPSHGHIEYI
THPGVAISTFSQLDVAANHVAYTHDNRGGSPREHFQFVVSNGQMSRNGSFEISVEMVDRI
LPSLTANRGLSVPQGTTVILGPECLALSDPDTPPEALTFALIQPPQYGKLLLNGVALTSG
SNFTQKNIQGMEVTYKHDGGPSQIDRFGFTASDSSARGFLLDGRLQTAAVFFTIQIQPLD
TRAPDVVKLLPLWKAEPLGDGRHGIFLSAHELKAQDSGSRDEQLMFCITRQPYFGYLENI
TTGGFVPQRFWQLELSKRTIVYVINPDKQSLSDSLEFQVSDTLGNTGPSHLLEFSWSSVE
LSLQTYFVCEEQGSVSLDIVRKGNLAESSYITVKVEEVTATAGRDYLPNPSSLIQFDPGV
SQRSWQIQIIQDNLEEAEEIFEVLLTSPEGTVVGSNSKAQVTIRRSGSRTGGGCRPNHGQ
HTPVLGGKEIPSNFYPQHGSIQLEKLPLGTDSVIWSRGDRISRPSGDVTGNKVRVIGNPK
VVAPSSVFHNGTDVVFTYHGIMQLQVEDDTSPSRKGRKANIHVVSRGVEQQAPAPKSKNR
EKTLKPEGRGSTKEPQVAAERSIPKPCTPELMGLLHLNQSTNQLLHCNGVSWKPWTPTDQ
MVSAQTCPRGWTFHGGRCYILIAENKVTWSEANRSCRERYKGTLSSVRSKVDMDWLWDFS
GRKPFWIGLNDREGRGRWEWVGGEPLVYTNWRKTPPRRRTKGRKKCVLVWRRAKWQSRDC
KSAQGRGFVCWLKPPSPVDRL
NT seq
6546 nt
NT seq
+upstream
nt +downstream
nt
atggctccacaaagactgatctggaccttattcccggtggtcctgttgggactgggcagc
tcatcacacacgtctctgctgaaagttaacaagggtctgaaggtcaaacgagggcagacg
gcgttcctgcaggagggcgacctgcagttcaacattccccgtcagaaggatgcctgcaag
ctggaggtggtgctgaacgagcccatcactcagagagtcgggaaactcctgcctcaggtg
tttgactgtcattatctctcagatgaggtcaagtatgtccataacggctgcccgctgtta
caggaggacactgtccaactcagactgtataggttcactgagacggagacacacatggag
gtgttttccatccatgtggacattgtccagcctgactgcagcatcataaagctggggcca
aagtccctgaaggttcctgagttctatagcctctctgatgctgtggatggtaacgtagtg
tcgttccactacgagaagagatccagtttacagtgcagcattcttttaagcagccaggac
acccacttcccagctcacggacaactggtgaccggcgagccagaggaagctaccaagaga
ggggacgagccagagagctttgtccccctgcgccagcagctagataataaagccagggcc
atgtgtagatcagaagactgcctgaagggtctgaagctcgtcaagttcacaaagatccca
tgtgatcagttcctaatgatgggcctgaggtaccagcacacagaccctccctctccagac
aaagactacatcaccatcaagctggagctcaaggacgtgcgcagtggcagcatttacagg
tctgaacaggtgtggattccagtgcagatagtcagcgccatgcccaaccagcctccaaaa
ccatccttcatgtccatgttcatcctagaggtggaccagtttatcctcacgccgctctcc
acggctacagtagatgctgaagatgaggagactccccaacagctcttagtcttcaacatc
accaaaccccccacccatggcttcatcacccacctttctgaccacactcgtccagtctcc
tctttcacctggctcgacctgaatgacatgctcattggctatcaacctccaaactcctca
cacagccaacggcagaattatgaggtggagtttgaggttcacgacctcttctttgagcgg
agcccatcaataacggttcatatgtctgtgaggaacgcagacacaaatgcaccgcgagta
tcctggaacatgggtctgagtctgctggagggtcagtcccggccgataacgtgggagcag
ctgcagatcgtggacaacgacaacctgaacgccgtccgtctcatcactctggatgggctt
caacacggacgtctcactgtcagaggtggaaagggcttcatgttcacggtcagcgacatc
aaagcaggcgtcgtccgctatcaccatgatgacagtgacaccaccaaggacttcataatc
ttccgcatcagtgacggccagcatcagacccgacacaaattccccattaaggttctaccc
aaggatgacagtcccccgttcctgatcaccaacatgctgctggaggtgtctgagggccag
acggtgctgctgagaggctccaccctccaagcctccgacatggactccagcgatgactac
attctcttcaacatcacacggcccccgcaggctggagaaatcatgaaagttccaggacct
ggactcacagggtatccggttagccagttcctacagaaggacctgtttcagtccatcatc
tactatcgccaccttggaaatgaggtgtttgatgactctttcgaagtggtgctgtcagac
ttccatgacccacccaacttctctgagtcacaggtggtgatggtgtacatagaacctgtt
cccgaccaaccacccaaagaagctcctggctccagccgctgtctggtcatcagggaaaca
gatgtagttcacatcacacgacaagagctccagtttgtagatgaggaatctccagacagt
gagctcacctacacagtcactagcccaccgttctacagcagctctcacagcagccacagc
tccgatgctggaagattgtttctagtcgatagcatcccaaaattccacaaagacccgact
gcgccagtgctaagactatttacacagcatgcagtcaacttcatgaaagtggcctacatg
cctccgattctggacatcggtcccaacccgcagcacatccagatgattctatctgtaacc
aaccacctgggcagaactgtgactgggatatgcttcaacatcactgtgatgccagtggac
aaccagcccccgcaggttgtcacccatgccctgattgtagatgagggaagagagagccca
ctcagctctcagaacctgctgctctcagatatggactccagagaagaagtcctgcaggtg
cagctaaagacaggcccacaacatgggtccctgaggataggtcccctcccattagaaaat
ggaggtttcttcactgtgaaagacttgaaaagccttaaaatgaggtacagtcatgatggc
tcagaaactctggaggacaacattgaattcatggcaacagacggcacaaactcaatcaca
ttcatcctcaaagtgaaggtgaatcccatcaatgatgaggttccagtggtcgctcctggt
ctcaaacctgtcctcagttgtccagagggacaggagatactcatcactaccgaattcctt
tatgccactgatgccgatactatcaacagcagcctgctcttcctcatcgctcggcaaccc
catcacggcgtggtgctccgcaaggacagcatcgtggaccgcttcattcaggctgatgtt
gctgcgggaattatctcctacaaacacatgggtcaggagatcggactaacgccccgccat
gacaccatcacctttgtcatttccgatgaagaatcaggaagtggaggagtcacagctgag
agcagaaagagggctgagctgaggaacagtctgccagtatatgacctgcacgtcaccgtc
tttccagtggacagtcagccgccgtcgctcacagcaggtgaggtcttcagtgttgaagag
ggtggggtcgctacgataaccgcttcacatctgagggcctctgatgtggacaccgccctg
gacaagctggtggtcagcctgacttatccaccccaatttggctacatagaaaatgtcctt
cccagtcctggctttgagaagagcaacacaggcatcagtatagcttcattctcatacaga
gacatcattaatggccacgtgaactacgtccagtcccgacaccagagggtggagcccaca
gctgaccagtttaaactctatgtgtcagacggccaacgcacctctgctcacgttcccttc
tacatcatcatcaaaccaaccaacgacgagatcccagagtttgtggctcacaacatcaca
gttgaagaaggagagaagaagcaactggatctgtccattttacaagtgatggatctggat
gtgcctgagaacaagcttcagttcagtgtgctcaaagctccaaaacatggcagcatcgtc
agctacagtgcagacaggctgaataccaagagaagagaggcccccatagccgactttaca
ctccaggatctgcaaaacggtatggatgtgatgtatgtgcacgatgactcagagaacatg
gaagacagtttcatcctgcaattgactgacggccggcatcaactggacagagaggtgatg
gtcagagtggagccagtcaatgatgagaagcctcaacttgtgaggaacaacggactggag
gtggagccaggagaaaccaggttaatttcaagtgttgtcctcctggcacaggatgctgat
actctctccactgatgtcatttacatgatccagagtgttcctaaacaaggagtcctgcag
ctgaaggaagctcaggactgggtgaccctcagagtggggagcaactgcagccaggagggg
gtgaatatgaaccttctgcgctacgtgcacacaggagcagatgacactaaagccctagac
ttctttgtcttctgcttgtttgatgggaaaaaccagtcacccccacagcatttctacatc
tccatcaaagagctggagaagggaatcatctccatctttgtgaagcctgtgaaggttagc
cgtggagatcgtgtggtcctcaccacagatgtgctgctggccacagatggtagcgacaaa
cctgaagagcttctctacgtggtcaccacccctccctctcacggacacatagagtacatc
acacatccaggagtggccatctccaccttcagccagctcgatgtagcagccaaccatgta
gcctacacccacgacaaccgcggcggctcaccgagagaacactttcagtttgttgtcagc
aatggtcagatgagccggaacggaagttttgagatttccgtggagatggtggatcgcatc
ttgccatcgctgactgccaatagaggcctctcggtaccccagggcaccaccgtcatcctg
ggtccagagtgcctggccctgtctgacccagacaccccccctgaggccctgacctttgcc
ctcatccagcctccacagtatgggaagctgctgttaaatggtgtcgccctgacctctggc
tcaaacttcacgcagaagaacatacaggggatggaggtcacatacaaacatgatgggggg
ccatcgcagatcgaccggtttggctttaccgcctctgacagctctgctcggggcttcctg
ctggacgggcgtctgcaaacagcagctgtgttcttcaccattcagatccagcctctggat
acgcgggctcctgatgttgtgaaactgcttcctctgtggaaagccgagcctttaggtgac
ggacggcatgggatcttcttgtcggcccacgagctgaaggctcaggacagcggcagcaga
gacgagcagctgatgttctgcatcactcgtcagccatactttggttaccttgagaacatt
accacaggtggttttgtaccacagaggttctggcagctggagctgagcaagaggaccatt
gtttacgtcatcaacccagacaagcagtctctgtctgacagtctggagttccaggtctca
gacactttggggaacacgggaccctctcatttacttgaatttagctggtcctctgtggaa
ctttctctccaaacttactttgtgtgtgaggaacaaggaagcgtctcgctggatatagtc
cgaaaaggaaacctggcagaatcctcatacatcaccgtcaaggtagaggaggtgacagcg
actgcagggagagattacctccctaatccctcttcactaatccagtttgatccaggcgtg
tcacagaggagctggcaaatacagattattcaggataatcttgaggaagccgaggagatt
tttgaagtgctgctgacctcccctgaaggcacagtggtcggcagcaacagcaaggctcaa
gtgactatcaggagatccggcagcaggacaggaggaggttgccggccgaaccatggtcag
cacacaccagttctcggaggaaaagagattccatcaaacttttacccccaacatgggtct
attcaactggagaagctgcctcttggcactgattcagtcatctggagccgtggggacagg
atctccaggccctcgggagatgttactggaaacaaagtcagagttatcggcaacccaaaa
gttgtcgccccttcatcagtttttcacaatgggacagacgtcgtcttcacgtatcatggg
atcatgcaactgcaggtcgaagacgacacgtcaccttcaagaaagggcaggaaggcaaac
atccatgtggtcagcaggggggtggagcagcaggcaccagcaccaaagtctaagaatcgt
gagaagacgttgaaacctgaaggacgtggcagtacaaaggagcctcaggttgcagctgaa
cgttccatcccaaagccctgtaccccagaactaatgggactgctccatttaaaccagagc
accaaccagctgctccactgcaacggtgtctcctggaaaccctggacccccactgatcag
atggtgagcgctcagacgtgtccccgcggctggacctttcacggtggccgctgttacatc
ctgatcgctgagaacaaggtcacgtggagcgaagccaaccgatcctgcagggagaggtac
aaaggcactctgtccagtgttcggtctaaagtggacatggactggctgtgggacttcagt
gggaggaaacccttctggatcggcctaaacgacagggagggccgagggcggtgggagtgg
gtcggaggggagccgctcgtctacaccaactggaggaagacgccaccccggcggaggacg
aagggccgcaagaagtgcgtgctggtgtggagacgggccaagtggcagagcagagactgc
aagtcggcgcaaggccgcggcttcgtgtgctggctgaagcctccgtcacccgtggacaga
ctgtga
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integrated database retrieval system
