Takifugu rubripes (torafugu): 101079132
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Entry
101079132 CDS
T02386
Symbol
tnrc6a
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X2
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101079132 (tnrc6a)
03036 Chromosome and associated proteins [BR:
tru03036
]
101079132 (tnrc6a)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101079132 (tnrc6a)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101079132 (tnrc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101079132
NCBI-ProteinID:
XP_011602119
Ensembl:
ENSTRUG00000009839
LinkDB
All DBs
Position
5:5819648..5844102
Genome browser
AA seq
1813 aa
AA seq
DB search
MAPIRDSVSHSPNQTGLEHPGLESQYEPSPWSSGSPCSGDGNSNWGKVLVDGSTDKSNNT
SANSSVWPPSSFSCSSSSSSSGCGSGSDPELASECMDADSSSLNGSEKHLAAVTTVMMSS
NASSSVSSTASSPSSSMVTSAVMIGVAANGDGNGNSRHMLGGGMGTVSGSNNGNITGPSH
FSVAGSSTIGSNNMGNHNKPINSGVWGTQSGSNVNTTSGNTPCINGGLNPNTLNPNANHG
AWPQNPTAGPSSQSQRPSQVQGMSSKLSVASQQGPALAWGSMAAPNSSMMEDGDASNGTA
GNKVLGSGNSGNGGLQPTNLNTESNGPNNTIMMNTTTTTNATMTSSSPNSIASPQLSGDC
PWGSIGGGNDGPLANGNSSASPQPQGELGGSGAFGTPWSATIYSGDEGYPNADTVNPPNP
ALMQAGNPQISSTAAYKSNNNQNNAGTPRWDQGATSNPNQPQNNVSWGFNSNQITYSAGH
APENDTQTTMGPPAGMPRPWGSSASSSSSSSSCSSTSNNKMSNSEWGATTPGETNSDAGN
FKGSSGNNGWRSLENDAMGIGAAGSGNPGLGTVTGGWGRSGGSEGSGESSGGRSSSDREG
SQSKGGNRRKVTATVPTTLARADVDPRVLSNSGWGQTPIRQNTAWDVTSTSENQHQGPRG
DERKQSSTGLGWGTATPAASSQTTGGWGNGPKPSGSGAGGSGWGDRPTSGWDGKASGNGE
GHGGWDDGSNYKGSNNTSNTWSNNKPDRSNTWNNTPKQQQGWGSSIGNGREGWGNGGDGA
RSGANNHWGEPQKGTGSAGWDSDSDRSGSGCWSEPGRTNTSTSTSSSNTWVGSGGSNTPD
QSTSNPGSNWGDSVQKPNPQSNSQGWGETMKNTQGTQNWGEPKPKPSNEWGSGPEASPSR
GTQGPNKTSGWLGGPMPTVGQKDEASNGWEEPSPESIRRRMEIDDGTAAWGDPGKYSGGP
VNMWNGTPQTDPEALGSSQRQSNPSHGSKHPPQPMQPVAQDNSSGWNESYTPKKEFSSWG
DPGIAPPVTVDNGTSAWGKPMDTSSGWVEPSRDNRDSGCGWGGQHKSGSKPMDTWCGEDV
NMGNSWDQEEEVEIGMWNNSQQDNRPNDQNTWNYKHKGSYKMNKQVNKQDEPWMKPFISQ
FNNMNFPRDSPDDSMKVGISDKRVDMGNMGDFNGVMGKNPGSRHQLHKDSTMDRSPYYDK
NVNPMMGGSSVAQGRGGPHSQVPPQPNLRNQVPPPILPSQVPPSLLKYPGGNGALNPLFG
AQQVAVLNHLTQLNQISQLQRLLQQQRQQQHQKAQSQRVMSMGRQNEQMRPIGSSPSMMQ
PPRHLDPSLLKQAPPLKPYLDSFLSHNNQEMLKDAPLGSYSNFPLSLNSNLNVPLDLGVS
SGGALSYKEPPQSKLKKLWATDPLEQNSKPGAMSSGLRLEDSPFYDILSSGPSPLSPPGQ
SMGSVGDSWPPRANSPPPHGNTVTWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSI
NTVRDTDHLRDRNNGPSSSLNTTMPSNSAWSSIRASSHSGSLTSTAQSTSARPSESKWSP
SGGSASNSSLAHELWKVPLPPKALSVAAPTRPPPGLTSQKLSSASSGWDSSALRLGGWGS
SESRYTPGSSWSDSSSSGRTQWLVLKNLTPQIDGSTLRTLCMQHGPLNTFHLNLPHGNAV
VCYSSKDEAAKAQKSLHMCVLGNTTILAEFASEEEINRFFAQGQSLATPSSGWQAVGSSQ
SRMDQSHHFPSRAPEPNQWNSSDLHSSSLWGGSNYSSSLWGTPGGTETGRMSSPSPISSF
LPVDHLAGGGDSM
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattcgggattccgtcagccactcccctaatcaaacaggtctggagcatcct
ggtttggagtctcagtatgagccttccccttggtcctctggctctccatgcagcggtgat
ggtaacagcaactggggcaaagtcctagtggacggaagcactgacaaatccaacaacact
tcagcaaactcttccgtctggcctccttcttcattctcttgctcctcgtcttcttcctcc
tccggttgtgggtcaggatcagaccccgagttggcatcagaatgcatggatgcagactct
agctccttaaacggctcagagaaacaccttgccgctgtgaccacagtgatgatgtcatca
aatgcttcttcctctgtgtcttctacggcttcttctccttcctcctcaatggtgacctcc
gccgtgatgatcggcgttgcggcaaatggagacggcaatggcaacagtcgacatatgctc
ggtggagggatgggaaccgtcagcggatcaaacaatggaaatattactgggccctcccat
ttttctgtggctggatccagcactattggcagcaataatatgggtaaccacaacaaacct
attaatagtggtgtctggggcacccagtcaggcagcaacgtaaacaccaccagtggaaac
accccctgcatcaatggtgggttgaacccaaacactttgaacccaaatgccaaccatggt
gcctggccacagaatccaaccgcaggcccaagctcccagagccaacgtccttcacaggtc
caggggatgagttctaaactgagtgtagcttcccaacagggccctgcgctggcctggggt
agcatggcagctccaaacagcagtatgatggaagatggtgatgcgagtaatggtacagct
ggcaacaaggtattaggaagcggcaacagtggaaatggtggcctccagccaaccaacctt
aacactgaatccaatggaccaaataacactataatgatgaatactactactactactaat
gccacaatgacctctagttcaccaaactctatcgcctcaccccagctcagtggggattgt
ccctggggatctattggaggagggaacgatggtccactggccaatggaaactcatcagcc
tctccgcaaccccaaggagagcttggtggttctggggcctttggtacgccttggagtgca
acgatttactctggagacgagggctacccaaatgcagacactgtgaaccccccaaaccct
gccttaatgcaggccgggaacccccagatctcctctactgctgcttacaagagtaataat
aatcagaataatgctgggaccccacgatgggaccagggcgccaccagtaatccaaaccag
cctcagaataatgtgtcctggggctttaactccaatcaaatcacatactctgcaggccat
gcaccagaaaatgacacccaaaccacaatgggcccaccagcagggatgcctcgcccttgg
ggaagcagtgcatcatcatcttcctcatcctcatcatgctcttccacatctaacaacaag
atgtcaaacagtgagtggggagccacaactcctggtgaaaccaactcagatgctggaaat
tttaaaggaagttcaggcaacaatggctggaggagcttggagaatgatgccatgggtatt
ggggctgcggggagtggaaaccctggcttggggactgtcactggtggctggggtcgctct
gggggaagtgaagggagtggggagagctctggtggccgctcgagctcagaccgtgagggc
agtcaatcaaaaggtggaaatcgccgaaaggtcactgcaactgtacccacaactctggcc
cgagccgacgtggacccgagggttctgtcaaactccggatggggacagactcccataagg
cagaacactgcctgggatgtcacttccacttcagagaatcagcaccagggtcctagaggg
gatgaaagaaagcaaagcagtacaggccttggctggggcacagcaacaccagcagcttcc
tctcagaccactggaggttgggggaatgggccaaaaccttcaggctcaggtgcaggaggt
tctggttggggagatcgcccaacatctggttgggacggcaaagcttcaggaaatggtgaa
ggccacggtggatgggatgatggctctaactacaagggtagcaacaacaccagtaatacc
tggagcaataacaaacctgacaggtctaacacatggaataacacacctaaacaacagcag
ggctggggttccagtattggaaatggaagggaagggtggggtaatggtggagatggtgcc
cgatcgggggccaacaaccactggggggagccccaaaaaggtacaggctcagcgggctgg
gacagtgacagtgaccggtctggttcagggtgttggagcgagcctggccgaaccaacacc
agcaccagcaccagcagcagcaatacctgggtagggagtggaggatcaaatacaccggac
cagagcacttcaaacccaggatccaactggggtgattcagtccaaaaacccaatccccaa
agcaacagccagggctggggggagacgatgaaaaacacccaaggaacccagaactggggt
gagccaaaacccaaaccatccaatgagtggggaagtggtcctgaagcaagcccttccaga
ggcactcaaggtccaaacaaaacctcaggctggttaggaggccccatgcccacagtaggt
cagaaagatgaggcatcaaatgggtgggaagagccgtctccagagtccattcgtcgaagg
atggagatcgatgatggaacagcagcctggggagaccctggtaaatacagtggtggacct
gtcaacatgtggaacgggacaccccagacagatccagaggctttgggctcatctcaacgt
cagtccaacccttcacatggctccaaacatcctcctcagccaatgcagcctgttgcacag
gacaatagttctggatggaatgagtcttatactccaaaaaaggaattttcttcatggggc
gatcctggcattgctccaccagtgacagtagacaatggcacatctgcctggggaaagcca
atggatactagctccggctgggttgaaccgagtcgagataaccgtgattctgggtgtggc
tggggcggacagcacaagtctggttctaagcccatggatacatggtgtggggaggacgtg
aatatgggcaatagctgggaccaagaagaggaggtggagattggcatgtggaacaacagc
caacaggacaaccggcccaatgaccaaaacacctggaactacaagcataaaggctcttat
aagatgaacaaacaagtcaacaaacaagatgaaccctggatgaaacccttcatcagtcag
ttcaacaacatgaacttcccgagagactctcctgatgactccatgaaggtggggatttca
gacaagcgtgtagacatgggcaacatgggagatttcaatggagtaatgggaaagaaccct
gggtctcgacaccagctccacaaggactccaccatggatcgcagcccttattatgacaag
aatgtaaaccctatgatgggtggcagcagcgtagcacagggccgaggtggcccccattcc
caagtccctccccaacccaaccttcgcaatcaagtgcctccacccatcctgccctctcag
gtccctccatccttgttgaagtatcctggaggtaatggagctctcaaccctctgtttggt
gcccagcaggtggctgtgctcaaccatctgacacagctaaaccagattagccaactccag
cgtcttctccagcagcagcggcagcagcaacaccagaaggctcagagtcagagagtcatg
tctatgggacgacagaacgaacagatgcgccccattggttcgtctccatcaatgatgcag
ccccctcggcaccttgacccctcactactgaaacaggccccaccgctcaaaccatacttg
gatagcttcttgtcccacaataaccaagagatgctgaaagatgctcctcttgggtcctac
agcaacttccctttaagcttgaactctaacctgaatgtaccattggacttgggtgttagt
agtggtggagctctgagctacaaagaaccaccccagtccaaactgaagaaactttgggct
actgaccctctggagcagaacagcaaacctggtgctatgtcgtctgggctgcgtctggag
gactctcccttctatgacatcctctcttctggcccgtctcccctgagtcctcctggccaa
tcaatgggctctgtgggtgatagctggccgccccgtgccaactcccccccaccccatgga
aacactgtcacctggcccccagagttccggcctggggagccttggaaaggttatcccaac
attgaccctgagactgacccttatgtgacccctggcagtgtcatcaacaacctttccatc
aacaccgtccgtgacacagaccacctcagggacaggaacaacgggccatcctcatcactg
aacaccacgatgccttcaaacagtgcctggtcatccattcgtgcctccagccacagcggt
tccctcaccagtacagcacaaagcacttcagctagacccagtgagtcaaaatggtctccc
agtggcggttctgcgtccaactcctctttggcccacgaactgtggaaagtccccctgcct
cccaaggcgttatctgtggcagcccccaccagaccaccacctggtctcaccagccagaag
ctgagttcggcttcctccggctgggacagttctgctctaaggttgggggggtggggctcc
tcggagtcccgatacacacctggttccagttggagtgacagcagcagctcagggagaacc
caatggctcgttctgaaaaatctcacacctcagattgatggctcgaccctgaggacgctg
tgcatgcagcacggccctctaaacacattccacctcaacctgccgcacggtaatgctgtg
gtatgctacagctccaaggatgaggccgccaaggcccagaagagcctgcacatgtgtgtt
ttgggaaacactactattctggccgagtttgccagcgaggaggaaattaatcgtttcttt
gcacaagggcagtcattggccactccctcctccggctggcaggccgttgggtcctctcag
agcagaatggatcagtctcaccactttcccagccgcgctcctgaacccaaccagtggaac
agcagcgatctccacagctcctccctctggggtgggtctaactattccagtagcctgtgg
gggacccccggtggcaccgagacagggaggatgagcagcccttccccaatcagctccttc
cttccagtggatcacctggctgggggaggagactccatgtga
DBGET
integrated database retrieval system
