Takifugu rubripes (torafugu): 101079147
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Entry
101079147 CDS
T02386
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101079147 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101079147 (dhx36)
03012 Translation factors [BR:
tru03012
]
101079147 (dhx36)
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101079147 (dhx36)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101079147 (dhx36)
Translation factors [BR:
tru03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101079147 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
NB-ARC
AAA_19
AAA_16
NACHT
Motif
Other DBs
NCBI-GeneID:
101079147
NCBI-ProteinID:
XP_011606627
Ensembl:
ENSTRUG00000001230
UniProt:
H2RRU2
LinkDB
All DBs
Position
11:complement(9883353..9901634)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSYGYGGGGGRRGRRGGRGHRDGSRERWDRSGGSRGHSSDFDQDRSGQRDRPPPHLKGRE
IGLWYAKYGAVRRKQADRRSRAVVQMDESREQHITKLLNSVQSNHPDPDEASTSSNTGHC
YFDGEAPEEEKPDIKSEEEDNIHPSQKKASLKSGRCLSTKYVKDEPPDTWDEEEQLLEGD
KEEEEKKTLERKDKDLEFLFHEVQRNGSLDDRLKRDLLEKKSEPKYKEMLQFREKLPSYG
KKEDLMALINSNRVVVVSGETGCGKTTQVTQFILDDHISRGLGSICRVVCTQPRRISAIS
VAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLHSDPLLSSISHL
VLDEIHERNLQSDVLLIIVKDLLSLRDDLKIILMSATLNAEKFSKYFDRCPMIHIPGFTF
PVEEFLLEDVVQMTRYLPQKKEGRPRWKKGFLQGRNFRPEKEEKEAEYLESWPCYARTLK
DRYSDDTVQAVEMLDSDEKIDLQLIVSLIRHVVLNEGEGAILVFLPGWDGISSLNDLLMA
QQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVFVIDGG
KIKETHFDTNNNISTMTEEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLMDAYQLPE
ILRTPLEELCLQIKILKLGSIARFLEKALDPPTEKAVSLAIKNLTDLNALDHTENLTALG
FHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRKVLSR
NSKSDHLTIINAFQGWEQAKQRGARYEREYCWDNFLSSNTLQMLQNMKGQFAEHLMHAGF
VSSPDPKDPKSNVNSDNEKLIKAVIVAGLYPKVATIRPSYSKKRPGVKVYTQADGRVYIH
PKSVNAEEREFNYKWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKEEGDETVAV
DQWIVFRCPARIAHLVKSLKKELDSLLEEKIQTPAPVDWQNSQSKDCAVISAIIDLITTQ
EKLAGGSGGYDSAPPPRGQHFYFDDD
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggatacggcggcggaggtggaagaagaggcagaagaggtggtcgagggcac
agagatggaagcagagagcggtgggacagaagtggcggctcgaggggacacagttctgac
tttgaccaagaccgaagtggacaacgggatcgtcctccaccgcacctgaagggccgtgag
atcggtctgtggtacgcaaaatatggtgctgtcaggaggaagcaggctgatcgcagatct
cgggcagtggtccaaatggatgagtccagagagcagcacattaccaagctgctcaattct
gtccagagcaatcaccctgatccagatgaagcctccacctcttccaacacaggccactgt
tactttgatggggaagcacccgaagaggagaaacctgacatcaaatctgaggaagaggac
aacattcatcctagccagaagaaagcaagtctcaagtcaggacggtgcctctccacaaaa
tatgttaaagatgagccgccggacacgtgggatgaagaagagcagttgctggagggggat
aaggaggaagaggagaaaaagacgctggaaagaaaagacaaagacttggagttcttgttt
catgaagtacagagaaatggttcactggatgaccgattaaagagagatctgctggaaaag
aaatcggagccaaagtacaaagagatgctgcaatttagggaaaaacttccatcctatgga
aaaaaagaggatttgatggcgctgatcaactctaaccgcgtggttgtggtcagcggggaa
acggggtgcggaaaaaccactcaggtcacccagttcatcctcgacgaccacatcagtcgc
gggttgggctccatttgccgggtggtctgcactcagcctcgccgcatcagcgccatctcg
gtggcagagcgtgtagcagcggagcgggcagaaagtgttggaaatggaaactcctgtggt
tatcagatccgcctgcagagccggttaccaaggagacaggggtcgattctgtactgtaca
acaggcataattcttcagtggcttcactcagacccgctcctgtccagcatcagtcatctt
gtgctggacgaaattcacgagagaaacctgcagtcggatgtgttgctcatcatcgtcaag
gacctgctcagcctccgggatgacctcaaaatcatcctcatgagcgccacgctcaacgca
gagaagttctccaagtatttcgacaggtgcccaatgatccacatccctggtttcaccttc
ccagtggaggagtttctactggaggatgttgtgcagatgaccaggtaccttccgcagaag
aaggagggacggcccaggtggaaaaaaggctttttgcaggggcgtaatttcaggcctgag
aaggaggagaaagaggcagaatacttggaaagctggccctgttatgcacgcaccctgaaa
gacagatactctgacgacaccgtccaagcagtggagatgttggacagcgatgagaagatc
gacttgcaactgattgtgtcgctcatccgccatgttgtgcttaatgaaggggaaggagcc
atcttggtgttcctgcctggctgggacggcatcagctccctcaatgatctgctcatggcc
cagcagatgtttcgatcagatcgattcgtcatcatccccttgcactctctcatgcctaca
gttaatcaaacgcaggtgttcaagagacctcctcctggagttagaaagattgtgattgct
accaatatagctgagaccagcatcaccatagatgatgtggtctttgtcatcgacggaggc
aaaattaaggagacccacttcgacaccaacaacaacatcagcaccatgacggaggagtgg
gtcagcttggccaacgccaaacagagaaaaggccgcgctggcagggtgtgcccggggaag
tgctaccatctttacaacggtctgagagccagcctgatggatgcctatcagctgcctgaa
atcctgcggacgcctctggaggagctgtgcctgcagattaagatattgaagcttggctct
atagctcggtttttggagaaagccttggaccctcccacagaaaaagctgtcagtctggcc
atcaagaacctcacagatctgaatgctctggaccacacagagaatctaacggccctgggg
ttccacctggcccgccttcccgtagagcctcacataggcaagctgatcctgttcggggct
ctgctgggctgcctggaccccgtcctcaccatcgccgcgtcgctcagcttcaaagatccc
ttcttcatacccctgggcaaagagaagatggcagacatgaggaggaaggtgctgtcaagg
aactcgaagagcgaccacctcactattatcaacgcttttcagggatgggagcaggcaaaa
caacgcggtgccaggtatgaaagggaatactgctgggataacttcctgtcctccaacacg
ctccagatgctacaaaacatgaaaggtcagttcgccgagcacctgatgcacgccggcttc
gtcagcagccctgaccccaaagaccccaaatcgaatgtcaattcagataacgagaagcta
atcaaggctgtcatcgtcgccggtctgtacccgaaggtggccacgatcaggccgtcttac
agcaaaaagagacccggagttaaggtgtacactcaggccgacgggagggtctacatccac
cccaagtcggtcaacgccgaagagagggaatttaactacaagtggctcatttaccacctg
aagatgagaacaagcagcatcttcctgtacgactgcaccgaggtgtcgccgttctcgctg
ctgttcttcggaggagacatcacgatccagaaggaggagggcgacgagacggtcgccgtg
gaccagtggatcgtcttccggtgcccggcgcgcatcgctcacctcgtcaagagtttgaaa
aaggagctggactccctgctggaggagaaaattcagactcctgctccggtggactggcag
aacagtcagtccaaagactgcgcagtcatcagcgccatcatcgacctcatcaccactcag
gagaagctcgccggcggcagcggaggttacgacagtgcgcctcccccgaggggacagcac
ttttactttgatgacgactaa
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integrated database retrieval system
