Takifugu rubripes (torafugu): 101079168
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Entry
101079168 CDS
T02386
Name
(RefSeq) retinoic acid receptor RXR-gamma-B-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03320
PPAR signaling pathway
tru04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
101079168
03320 PPAR signaling pathway
101079168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101079168
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tru03310
]
101079168
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101079168
Nuclear receptors [BR:
tru03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101079168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
101079168
NCBI-ProteinID:
XP_011613065
Ensembl:
ENSTRUG00000006878
LinkDB
All DBs
Position
20:8006860..8023802
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AA seq
473 aa
AA seq
DB search
MRWDAASTVGDRRFNSHIMDSNDPYLHLNSSGPMSAAHAQPAHMGGMVGHPSVINTSRPL
LSPMTTLGSPMNGLASPYSVITSSLGSPSVSLPSTPNMNFGPINSPQMNSMNSSEDIKPP
PGLHNLGNINYQSTSPGGISKHICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTC
RDNKECLIDKRQRNRCQYCRYQKCLAMGMKREGVCSRSVQEERQRGRERGDSEVESTSGF
NEDMPVDKILDAELAVEPKTETYNEGIPSNSTNDPVTNICQAADKQLFTLVEWAKRIPHF
SELPLDDQVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRV
LTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSNPQEVEGLREKVYASLESYTKHKYP
DQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgggatgcagcatcgactgtaggagatcgacgcttcaactcgcacattatggac
agcaatgatccatatttacacctcaattcgtcggggccgatgagcgctgcccacgctcag
ccggctcacatgggtggcatggtgggccacccgtcagtcatcaacacctccagaccgctg
ctgtcccccatgaccaccttgggctcaccaatgaacggcctggcctcgccctactctgtc
atcacttcttctctgggctcgccatctgtgtcgctgccgtctacacccaacatgaacttt
ggacccatcaatagtccacagatgaattctatgaacagctcagaggacatcaagcctccg
ccgggtctgcacaacctgggaaacatcaactaccagtcaacgagccccggcggcatttca
aaacacatctgctccatttgcggggaccgctcctcaggaaagcactatggcgtctacagc
tgtgagggatgcaaaggcttctttaagaggaccgtccgtaaagatctcacctacacatgt
cgagacaacaaggagtgcctgattgacaagcgccagaggaaccgctgccaatactgccgc
taccagaagtgcctcgccatggggatgaagcgggaaggtgtgtgttcaagatccgtgcag
gaagagaggcagcgggggagagagcgcggagacagcgaggtggaatctaccagcggcttc
aacgaggacatgcctgtggacaagatcctcgatgctgaattggccgtggagcccaaaaca
gagacgtacaatgaaggaatccccagcaactcaacaaacgaccccgtcaccaatatctgc
caggcagcagacaagcagctcttcaccttagtggagtgggccaagaggatcccgcacttt
tctgaactccccctcgatgaccaggtcattctgcttcgagcaggctggaatgagctcctc
atcgcctccttctcgcatcgctctgtcacagtaaaagacggcatcctgctggcgacgggt
ctccacgttcatcgcagtagcgctcacagcgctggagtgggctccatttttgatcgggtc
ctgacggagctggtgtccaagatgaaagacatgcagatggacaagacagagctcggctgt
ctgcgcgccatcgtcctcttcaacccagatgcgaaaggtctttcaaacccccaagaggtc
gaggggctgagggaaaaggtttacgcgtcgctggaatcgtacacgaaacacaaatacccc
gaccagccgggcaggtttgccaagttgctgctgcgcctgcccgctctgcgctccatcggc
ctcaagtgtctggagcatctgttcttcttcaagctcatcggcgacacgcccatcgacacc
ttcctgatggagatgctggaggcgccgcatcagatcacatga
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