Takifugu rubripes (torafugu): 101079387
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Entry
101079387 CDS
T02386
Name
(RefSeq) neurexin-3b isoform X1
KO
K07377
neurexin
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101079387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101079387
Membrane trafficking [BR:
tru04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
101079387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
101079387
NCBI-ProteinID:
XP_029705299
LinkDB
All DBs
Position
16:complement(4899667..5093684)
Genome browser
AA seq
1719 aa
AA seq
DB search
MRPNSLPAHVLLLLSTVLVLSAGLEFTGSEGQWARYTRWDASSRSDLMFQFKTSEPEGML
LYFDDGGFCDFLLLAVSEGRLQLRFSIDCAETTVTSGQMVDDGRWHFAAVNRHNLRTGLA
VDGLTKTGEVRPQRQFMKVVSDLFLGGLPGDIRTSAITLPSVRELPPFKGIITDLSYGSK
QLPMLINSQKVRLEMMGLCTENPCENGGICSLADGETYCDCTKTGYVGRYCTEAVLRKPG
LAHLKAEQGRNKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDIKVTRNLRQQSGIGHA
MVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCL
KEVVYKNNDIRLELSRLARIMDPKMKLQGDVVFKCENVPTLDPINFEMPESYLALPKWNT
KRVGSISFDFRTSEPNGLILFTHGKPQDRRDAKGQKNNKVDFFAVELLDGGLYLLLDMGS
GTIKVKATQTKVNDGTWHHVDIQRDGRSGIISVNSRRTPFTASGENEILDLEGDLYLGGL
PDNRAGLVLPTELWTAMLNYGYVGCVRDLFIDGRSKDIRQIAQSQNMTGIKSSCNKLTGK
QCDSNPCKNNGVCKEGWNRFICDCTGTGYWDFSCDKEASILSYDGSMYMKVVIPTVVHTE
AEDVSLRFMSQRAFGLLMAATSRQSADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEVL
YAGQKLNDNEWHSVRVSRRGKNFKLIVDDDMAEGQMAGDHTRLEFNNVETGILTERRFVS
SAPSSFIGHLQSLKFNGMQYIDMCKNGDIDFCELNARFGMRFIIADPVTFKTKGSYLGLA
TLQAYTTMHLFFQFKTTSPDGFLFFNSGDGNDFIAVELVKGFIHYVFDLGNGPSLLKGNS
DNPLNDNQWHNVVITRDASNTHTLKVDTKSVTQNVNGAKNLDLKGDLFVGGLGPNMYQNL
PKLVVSREGFQGCLASVDLNGRLPDLINDALFRSGQIERGCEVGFTKADLQGPSTTCQED
SCANMGVCIQQWENFTCDCSMTSYTGTHCNDPGTTYIFGKGGGLITYTWPNNERPSTRTD
RLAVGFSTTIKDGILVRIDSAPRLGDYIMLHIEQGKVCVTFNIGTVDISVKETSTPINDG
KYHLVRFTRNGGNATLQVDNWPVNEHFPTGNSDIERYQMANKKIPFKYTRPVEDWLQEKG
RQLTIFNTQATITIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHVNIKVNGSVRLVGDV
PNSRGGARTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDED
LEECDSGHAGGELVIPVLVEDPIDIPSVSTRSPFIPLPPTLRPVLTIIETTKESLAMATE
AGVPCLSDRGNDDCDGGDDGDGDDDDDDDDGMVISGFGSGEAFDSSLPPTDDEDFYTTFS
LVTDKILTTSAYEGGYKALAPKWEAKDLRPSKASEAGRTTPTSPLPNPRSTPPAAVPSDT
PPKLPAGKMNNREVKPLQPDIVLLPLPTSFDLDGTKPRGPFITSPMLRTVPAPLPTVPSV
VRRVPPGASEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNYI
SNSAQTNGAVVKDKTPSSGSAKGNANSKRPKDKDKEYYV
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccaacagtctacctgctcatgtcctcctgctgctaagtactgtcctggttctg
agtgcaggtttagagttcacgggctccgagggtcagtgggctcgttacacccgctgggat
gccagctccagaagcgacctgatgttccagtttaaaacttcagagccagaaggcatgctg
ctctattttgacgacggcgggttttgcgactttcttctcctcgcggtgtctgagggcagg
ctccagctccgcttcagcatcgactgcgcggagaccactgtcacctccggccagatggtc
gacgacggccgctggcactttgccgccgtcaaccggcacaatttgcggaccggcttggct
gtagacgggctgaccaagacgggagaggtgaggccccagcgacagttcatgaaggtcgtc
agtgacctcttccttggtggacttccgggggacatccgcacctcggctatcactctgccc
tccgttcgcgagctaccgccgttcaagggaattatcacagatctcagttatgggagtaag
cagctgccgatgctgatcaacagtcagaaagtgcgcttggaaatgatgggcctttgtaca
gaaaatccctgcgagaatggagggatctgctctctggcagacggagaaacctactgtgac
tgcaccaaaactggatatgtgggtcgatactgtacagaagctgttctaagaaaaccaggt
ctcgcacacctgaaggcagagcaaggtagaaacaaagcgagagaagagaatgtggccaca
ttccgcggatcggagtatttctgctacgacctgtctcagaaccccatccagagcagcagc
gatgagatcacgttgtcctttaagacctggcagagaaacggcctcctgctccacacaggc
aaatccgccgactacgtcaatctggcactaaaagatggagccgtctccctcgtcatcaat
ctgggttccggggcctttgaggccatcgtcgaaccagtcaatggaaagttcaatgacaat
gcctggcacgacatcaaagtgacgcgcaacctgagacagcaatcaggcattggacacgct
atggtaaacaaactacattgtctggtcactatctcagtggatgggatcctcaccacgaca
ggctacacccaggaggactacaccatgctgggctctgatgattttttctatgtgggggga
agtcctagcactgccgacctgcccggctctccggttagcaacaacttcatgggctgcctc
aaagaggtggtctacaagaacaatgatatccgcctggaactgtctcggctggcccgcatc
atggaccccaagatgaaactccagggagacgtagtctttaagtgtgaaaatgttcccacc
ctggaccccatcaactttgagatgccagagtcctacctggcccttccgaagtggaacacc
aaacgcgtgggctccatctccttcgatttccgcacctcagaacccaacgggctgatcctc
ttcacccatgggaagccgcaggaccggcgggatgcgaaaggccagaagaacaacaaggtg
gacttctttgcggtggagttgctggacggggggctgtacctgctgctggatatgggttct
ggcaccatcaaggtgaaagccacacagacaaaggtcaatgacggcacctggcaccatgtg
gacatccagagagacggacgctcaggaatcatctcagtaaacagccgtcggacccctttc
acagcgagtggtgaaaatgagatcttggacctggagggggacctgtatctgggtggactt
ccagacaacagggctggtctggtgctccccaccgagctctggaccgccatgctgaactac
ggctatgtgggctgcgtgcgggatctgttcatagatggacgcagcaaggacatacggcag
atcgctcagtcccagaacatgaccggcatcaagtcgtcgtgcaacaagctgacggggaaa
cagtgcgacagcaacccctgcaagaacaatggggtttgcaaggaggggtggaaccgcttc
atctgcgactgcactgggactggttactgggatttctcctgtgacaaagaggcgtccatc
ctgtcgtacgacggcagcatgtatatgaaggtggtgatccccaccgtggtgcacacggag
gccgaggacgtctcacttcgcttcatgtctcagcgggcgtttggcctcctgatggccgcc
acgtcccgccagtctgccgacacgctcaggctggagctggacagcggacgggtcaagttg
acggtcaacctagactgtgtcaggataaactgtaacaccagcaaaggccctgaggttctc
tatgctggacaaaagctcaacgacaacgagtggcactcggtacgagtgtcccgtcggggt
aaaaacttcaaactcattgtggatgacgacatggctgaaggtcagatggccggcgaccac
acccgcctggagttcaacaacgtggagacgggcattttgactgagaggcgcttcgtctcg
tccgctccctcctccttcatcgggcatcttcagagcctcaagttcaacggcatgcagtac
atcgacatgtgcaagaacggggacatcgacttctgcgagctgaacgcccgcttcggcatg
cgcttcatcatcgccgaccccgtgaccttcaagacgaagggcagctacctgggcttggcc
accctgcaggcctacaccaccatgcacctgttctttcagttcaaaaccacgtcgcccgac
ggcttcctcttcttcaacagcggagacggcaacgacttcatcgcggtggagctggtgaaa
ggtttcatccactacgtgtttgacctggggaacgggccgagcctgttgaaggggaacagc
gacaacccgctcaacgacaaccagtggcacaacgtggttatcacgagggacgcctccaac
acacacacgctgaaggtggacacaaagtctgtcacgcagaatgtcaacggcgccaagaac
ctggatctgaaaggtgatctgttcgtcgggggtttgggacccaacatgtaccagaacctc
ccgaagctcgtggtgtcccgggagggcttccagggctgcttggcctcggttgacctgaat
ggccgcctgccagacctcatcaacgatgcccttttccgcagcgggcagattgagcgcggc
tgtgaagttggtttcaccaaagccgacctgcaaggtccaagtacgacctgccaggaggac
tcgtgtgccaacatgggcgtgtgcatccagcagtgggagaacttcacatgtgactgctcc
atgacgtcctacaccgggacgcactgcaacgacccgggcaccacttacatctttggtaaa
ggaggggggctgatcacatacacctggcccaataacgagaggccgagcacacggacagac
cggctggcggtgggcttcagcaccaccatcaaagacggcattctggtccgcattgacagc
gccccccgcctgggtgactacatcatgctccacatcgaacagggaaaagtatgcgtgacg
ttcaacatcgggacagtggacattagcgtgaaggagacgtccaccccaataaacgatggc
aaataccatttggtccgattcaccaggaacggaggcaatgctacattacaggtggacaac
tggccagtcaatgaacactttcctacaggcaacagcgacattgagcgctatcaaatggca
aataagaaaatcccgttcaaatatacccggccagtagaggattggcttcaggagaaaggc
cggcagctgacaatcttcaacacccaggcgactatcaccatcggcgggaacgaccggaag
cgcccctaccagggccagctctccggtctttattacaatggtctcaaagtcctaaacatg
gccgccgaaggccacgtcaacatcaaggtgaacggcagcgtgcggctggtgggtgacgtg
ccaaacagcaggggcggcgcacgcaccaccacgtcagtgccaccggagatgtccaccacg
ttcatcgagaccacgaccacgctctccaccacaactacccgcaaacagcgctcgccaccg
actatccagaccacggatgacatcgtgtcttcggcagaatgttccagcgacgacgaggac
ctggaagagtgcgactccggacacgcaggaggggagctagtcatccccgtgctagtcgag
gaccccatagacatcccctctgtatccacccgttctcccttcatccccctccccccaacc
cttcgccctgtcctcaccattattgagaccaccaaagaatccttggccatggccactgag
gcgggggtaccttgcttgtcggaccgaggcaacgatgattgtgatggtggtgatgatggt
gatggtgatgatgatgatgatgatgatgatggcatggtgatttcggggtttggctctggc
gaagctttcgactctagcctgcccccgactgacgatgaagatttttacaccaccttttcc
ctggtaacagataagatcttgaccacatcggcctatgaaggcggctacaaagccctcgcg
cccaagtgggaggccaaggacttgaggcctagcaaagcctctgaggcaggtaggactaca
ccaacctcacctctgcccaatccccggagcacgccacccgcggcggtcccctcagacacg
ccgcctaagctgcccgctgggaaaatgaacaaccgcgaggtaaaacccctgcagccagac
atagtcctcctgcccctgcccacatccttcgatctggacggcaccaagccgcggggcccc
ttcatcacctcgcccatgctgcgtaccgtgcccgcccccttgcccacagtgcccagcgtg
gtacgacgggtgccacccggggcgtcggaggtaatccgggaatccagcagcaccacgggc
atggtggtaggcatagtctcagccgccgcactctgcatcctcatcctactctacgccatg
tacaaatacaggaaccgggacgagggttcctaccaagtggacgagacgcgcaactacatc
agcaactcggcgcaaaccaatggcgctgtagtcaaggataaaacacccagcagcggcagc
gccaaaggcaacgccaatagcaagagaccgaaagacaaagacaaggaatattatgtatag
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integrated database retrieval system