Takifugu rubripes (torafugu): 101079485
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Entry
101079485 CDS
T02386
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101079485 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101079485 (cnot3)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101079485 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101079485 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
101079485
NCBI-ProteinID:
XP_011617112
Ensembl:
ENSTRUG00000015732
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All DBs
Position
7:complement(15219306..15225368)
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AA seq
900 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWLASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKSDKEKQDRIEELKRLIERHRFHI
RMLETILRMLDNDSIPVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNVEDEMFLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGGMPAVPTSSSLIGSFSSAVQQHQHQP
AQQQPPSQQQQQPSQSKPSAQANNTPSPPSNPLLAASTAPSLPTPSTPISIPSNSQSQST
PVPTSSLGLGLGLGLSKVGMTGTSSSNQMAGLGLGGHPTPLNTMAGLISGSTPAPYAQAA
ASGGLGLNSSAQSSISSESSTSIPTSGSSGATTNGAGTGLGLLGTSPAHNSLSGSILGLV
PGQSAAPSATQVPPSSVNSTPGVVGLLGSNGGGVGVVGGVGVNAVPARPPSGLKQNGSTS
YSAIVAESSTESALSTPTQSQGSQPSSLSSSTSQPLDNGPSLISSITLPPSSPSPSFSDS
TPGGGSLLNGPHSYTQASEGLKAPEPLSSLKAMAERAALGSGLDGELANLHLTDRDIFSG
SSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQVMQESAWTHMPHPSDSER
IRQYLMRNPCPTLPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKK
QSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggggaaattgatagatgcttgaaaaaagtagctgaa
ggtgtagaacagtttgaagacatttggcaaaagctacacaatgcagccaacgcaaaccag
aaggaaaaatacgaggctgacctcaagaaagagattaaaaaactacaacgattgagagac
cagataaaaacatggttggcctcaaacgaaatcaaagacaaaaggcagctaattgagaac
cgcaaactcatagagacgcaaatggagcggttcaaggttgtagagagggaaacaaaaaca
aaagcgtattcaaaagaaggcttggggctcgcccagaaagtcgatccagctcagagggaa
aaggaggaaacgggacagtggctgacgaatacgatagacacgctaaacatgcaggtggat
cagtttgaaagtgaggtggagtctctgtcggttcagacgcggaaaaagaagagcgacaaa
gagaagcaagatcgtatcgaagagctgaagaggctgatcgagcggcaccgattccacatc
cgaatgctggagaccattttacgaatgctggacaacgactcgataccagtagactcgata
cagaagatcaaagacgacgttgagtattacatcgattcctcacaggacccagacttcgag
gagaacgagttcctgtacgatgatttagatctggaagacatccctgcagcgttagtggcg
acctctccgtcaggccagggtaacgtggaagatgagatgttcctccactccagcagcacc
cccacttccaccacctcctcgtcgcccatccctccgtccccggccacgtgcactgcggag
aactcggaagacgataagaaaagggggcgatcgacagacagtgaagttagtcagtcaccc
gtgaagaatggcacgccatccttgctctcctccttctcgtcctccaccacctcggggtcc
tcctcgtcctcctccctcgtgtccatggcgagcgtggtgggcggcatgcccgcggtaccg
acgagcagcagcctgatcgggagcttcagcagcgcggtgcagcagcatcagcatcaacct
gcacagcagcagcctcccagtcaacagcagcagcagccgtctcagtccaaaccttctgcc
caagcaaacaacacccccagcccacccagcaaccctctcctcgccgcctcaactgccccc
tctctccccacgcccagcacacccatctcaataccttccaactcccagtcgcagtccaca
ccagtcccgacatccagtttgggactgggcctgggcttgggcttgagcaaagtcggcatg
acggggaccagcagttccaaccagatggctggtttgggcctgggtggacaccccactccc
ctaaacacaatggcagggcttatttcaggctccacgcctgccccttatgctcaggcagca
gcgtcgggaggcttgggtctgaacagtagcgcccagtccagcatttcatccgaaagcagc
acttctatccccacatctggctccagtggagccaccaccaacggggcagggacgggtttg
ggcttgctgggaaccagtccggcccacaactctttaagcgggagcattctgggcttggtt
ccagggcaaagcgcagccccctctgccactcaggtgccgccgagttctgtcaacagtaca
ccgggggtggtcggcctgctgggcagtaatggtgggggtgtgggtgtggttggaggcgta
ggggtaaatgctgtccctgcgagaccgcccagcgggctcaagcaaaacggaagcacaagt
tacagtgccatcgtggcagagagctcgacagaatcggctctgagcacaccgacccagtca
caaggcagccagccctcatctcttagttcttctaccagtcagccgttggacaacgggccc
agtttaatcagctcgatcaccctgcctccgagttctccgtccccctcgttctcagacagc
accccgggaggagggagtctcctcaacgggccacactcctacactcaggcctcggagggt
ctcaaggctcctgagcctctcagttccctgaaggccatggctgagagagcagcgctgggg
tccggcctggacggagagctcgccaacctgcatctaacagaccgagatatcttctccgga
tcgtctgcggcgccgggcacgcccgccgcccctcagccgtccgtatcggaggtcagcatc
cccccctcgctgggagtgtgtccactgggccccacgcccctccccaaggaccagctctac
cagcaggtcatgcaggagtcggcgtggacacacatgccccacccctctgactcggagagg
atcaggcaatacctgatgaggaacccgtgccccaccctgcccttccatcatcaggtacca
ccgcaccactctgactccatagagttctaccagagactgtccacagaaacactgtttttc
atcttctactacctggagggcaccaaggctcagtatctgtcagccaaggcgctgaagaaa
caatcgtggaggttccacaccaagtacatgatgtggttccagaggcacgaggagcccaag
actatcacggatgagttcgaacagggcacttacatttactttgactatgagaaatggggc
cagaggaagaaggagggctttacctttgagtacaggtacctggaagacagagacctgcag
tga
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