Takifugu rubripes (torafugu): 101079492
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Entry
101079492 CDS
T02386
Symbol
ddx27
Name
(RefSeq) putative ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101079492 (ddx27)
03009 Ribosome biogenesis [BR:
tru03009
]
101079492 (ddx27)
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101079492 (ddx27)
Spliceosome [BR:
tru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101079492 (ddx27)
Ribosome biogenesis [BR:
tru03009
]
Eukaryotic type
Pre-60S particles
Helicases
101079492 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-GeneID:
101079492
NCBI-ProteinID:
XP_029682538
UniProt:
H2RXD2
LinkDB
All DBs
Position
19:complement(19128329..19135070)
Genome browser
AA seq
754 aa
AA seq
DB search
MIEQLGLIGTIRDEEQSPEEPDTESEQEDEPIILNRKKKFGSGGSKDFNSGFEFGERDCL
TDETWVMSDVMSQLKKKRSLTTLDQKIEKIRKKRKADEKASGSLPPECSTGNSQDEGEEV
EEAHDDSDANSEEEEEEFDSGDEEILTKSDTLRDKQQRARKKKGEEEGPESFFEDASQYN
DQLTFDDMNLSRPILKAITALGFKQPTPIQKACVPVGLLGRDLCACAATGTGKTAAFVLP
VLERLVYKPRTSQVTRVLVLVPTRELGIQVHAVTRQLAQFTSITTCLAVGGLDLKSQEVA
LRAGPDVLIATPGRLIDHLHNTPSFELSHIEILILDEADRMLDEYFEEQMKEIIRLCSYN
RQTMLFSATMSEEVKDLAAVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAVVA
ALLTRTFQDHVMCFTQTRKQAHRLHILLGLMGLKVGELHGELSQNQRLENLRRFKDEQID
ILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLVGESERKIL
KEVVKSAKTTVKARVLPAEVILKFRDLISKLEKDVEAVIKLEREERELAASEAKLSVAQK
KLDGSATSTQSQRVWFQTQQERKQSRLSKALQEFDLALRGKKKREKFLKDSKRKKELTPE
ERAHFEILKAQMFAERAAKRERRPKRARVMVEEETSAAANHKVKAKGRKSVFDQELTNTN
RKSLKNYRAGPSFTEKKRLQFDRKNPRNSRYKKK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgatagagcagcttggactgatcggaacaatccgggacgaggagcagagtccagaagag
cccgacaccgagtctgagcaggaagatgagccgatcatactgaacaggaagaaaaagttt
gggagtggagggtcgaaagacttcaacagtgggtttgagtttggggagagagactgtctg
accgatgagacctgggtgatgtctgatgtgatgagccagctcaagaagaagaggagtttg
accactctggatcagaagatagagaaaatcaggaagaagaggaaggctgacgaaaaggca
tctggaagtttgcctcctgaatgttctacaggaaatagccaagatgaaggtgaagaagtg
gaagaagctcatgatgacagtgatgctaattcagaggaggaggaggaggaatttgattcg
ggtgatgaggagattctgaccaaatcagacaccctccgagacaaacaacaacgggcaagg
aagaagaagggggaggaggagggtccagagtcattctttgaagatgcatctcagtacaac
gatcagctgacctttgatgacatgaacctctccagacccatcttaaaggcgatcacagct
ctgggctttaagcaaccgacgcctatccagaaggcctgtgttcctgttggccttctgggt
cgagacttgtgtgcttgtgctgctaccgggacagggaagacggcagcattcgtgttgcca
gtgttggagcgtttggtttacaagccgagaacatcacaagtcactcgagttttggttctg
gttcctaccagagagttggggatccaggttcacgctgtgacccgtcagcttgcccagttc
acctccatcaccacgtgcctggctgttggtggattggacctaaaatctcaagaggtggct
ctgagggcagggccagatgttttgatagcgacacctggcaggctgatcgatcatcttcac
aacacacccagctttgagctgagtcacattgaaatcctgatcctggacgaggctgacaga
atgttggatgaatactttgaggagcagatgaaggagatcatcaggctgtgttcctacaat
cgacaaacaatgttattctccgccacaatgtcagaagaggtgaaagacctcgcagcagtt
tcactgaagcagccggtcagaatctttgtgaacagcaacactgacgtagcaccgtatttg
cgacaagagtttgtgagaattcgtccaaacaaagagggtgacagagaagctgtggttgct
gctctccttacaagaacatttcaggaccatgtgatgtgtttcactcagaccaggaaacaa
gctcacaggctgcatattttgttgggactgatgggactaaaggttggagaattgcatgga
gaactgagccagaaccagaggctggagaacctcagacgttttaaggacgaacagattgat
attttggtggcaacagatgtggcagctagaggtctcgacattgatggagtcaaaacagtg
atcaacttcacgatgccgtctacggtgaaacactacgtccaccgtgttggacgaacggcc
agagccggtcgctctggccgttccgtttccctcgtgggggagtctgagaggaaaattctg
aaggaggttgtcaagtcggcaaaaaccactgtcaaagctcgagtcctgccagcagaagtc
atcctgaaattcagagatctgatttcaaagctagagaaagatgtggaggcggtcataaag
ctggagagagaagagcgagaactcgctgcatcggaggcaaagttgagtgtagcccagaag
aaactagatggttctgctacatcgactcagtctcagagagtttggtttcagacccaacag
gagagaaaacagagccgcttatccaaggcgctacaggagtttgatctggccctgagaggg
aagaaaaagagagagaagttcctgaaggacagcaagaggaaaaaggagttgacgcctgaa
gagcgcgctcatttcgagatcctgaaggctcagatgtttgctgagcgggcagccaagaga
gagcgacggccaaagagagcaagagttatggtcgaggaggagacaagtgctgcagctaac
cataaagtaaaggccaaaggaagaaagtcggtatttgatcaagaactaaccaacacaaac
aggaaatctctgaagaactacagagcgggaccttcattcacagaaaagaagcgtcttcaa
tttgacaggaaaaatcctcgcaattccaggtacaaaaagaagtaa
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