Takifugu rubripes (torafugu): 101079656
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Entry
101079656 CDS
T02386
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04136
Autophagy - other
tru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101079656
04136 Autophagy - other
101079656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101079656
03029 Mitochondrial biogenesis [BR:
tru03029
]
101079656
Membrane trafficking [BR:
tru04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
101079656
Mitochondrial biogenesis [BR:
tru03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101079656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_EML
Beta-prop_HPS5
CPSF_A
WDR55
EIF3I
Beta-prop_IFT140_1st
CNH
Beta-prop_Vps41
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
101079656
NCBI-ProteinID:
XP_003964417
Ensembl:
ENSTRUG00000011117
UniProt:
H2TTQ7
LinkDB
All DBs
Position
5:556553..568633
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AA seq
457 aa
AA seq
DB search
METGEDTGGPSGPGDLGLRFGCASFNQDSTSLAVGTKTGYKLFSLTTVEKLDCIHESAET
PDVYIVERLFSSSLVVVVSTTTPKRMNIYHFKKGTEICNYSYPSNILAVKLNRQRLVVCL
EESIYIHNIKDMKLIKTLLNTPANNSGLFALSINHSNSYLAYPGSATNGEIIVYDANSLS
TVAVITAHDSPLAALSFNTTASQLASASERGTVIRVFSIPEGLRLFEFRRGMKRYVSISS
LSFSPDGQFLCASSNTETVHIFKLEQLEPNAGDDTSTWTAYVGKVLSAATSYFPAQVSDM
MSQDRAFATVHLLKTNQRNICALAMIQKLPRLLVATAEGQFFIYNVDPLDGGECMLVYKH
RLFGPDDEQTQETDSVGAEVTMPVQPFPSYAATAALPASGPVTATLTGYSEDGGAKKGEV
IPEHEFAAGPVCLDDENEFPPINWCHDGTGGGQVRRS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggagaggataccggagggcctagcggaccgggcgacttggggcttcggttt
ggctgcgcctcatttaaccaagactccacgtcattggctgtgggaacgaagactggttat
aagctgttttctttgaccaccgtggaaaaactggactgtattcatgagagtgcagagact
ccagatgtgtacatcgtagagcgtctgttctcaagcagtctggttgtcgtggtgagcaca
accacaccaaagcgtatgaacatttaccacttcaagaagggcacagaaatctgtaactac
agttaccccagcaatatcctggctgtcaaactcaacagacagaggcttgttgtgtgcctg
gaagagtccatatatattcacaacatcaaagacatgaaactgataaagactcttctcaac
actccagctaacaattcagggctctttgctctatctatcaaccattccaactcgtaccta
gcataccctgggagtgccaccaatggagagatcattgtgtatgatgccaacagtttgagc
acagtggcagtgattactgcccatgacagccccctggcagcactgagcttcaacaccaca
gccagccaactagccagcgcctccgaaaggggtactgtcattcgagtgttctccattcca
gagggccttcgtttgtttgagttccgccgaggaatgaagaggtatgtcagtatcagctct
ttgtccttcagtcctgatgggcagttcctctgtgcatctagtaacacggagacagtacat
atcttcaaactggagcaactagagcccaatgccggggatgacacttccacctggacagcc
tatgtggggaaggtgctctctgcagccaccagctatttccctgctcaggtatcggacatg
atgagccaagaccgggcctttgccacagtccacttgctgaagaccaaccagaggaacatc
tgtgctttggccatgatccagaagcttccacggctgcttgtggcaacagctgagggccag
ttcttcatttacaatgtggatccactggatggaggggagtgcatgcttgtttataagcac
aggctgtttggaccagacgatgagcagactcaagaaacagattcagtgggggcagaggtc
acgatgccagtacagccttttccgtcctatgctgcaactgctgccttaccagcctctggg
cctgtgactgcaacccttactggttactctgaagatgggggagcgaagaaaggtgaagtc
attccagaacacgagtttgctgctggaccagtgtgtctggatgacgagaacgagtttcct
ccaattaattggtgccacgatgggactggaggtggtcaggtgaggcgctcatga
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