Takifugu rubripes (torafugu): 101079660
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Entry
101079660 CDS
T02386
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101079660 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
tru04031
]
101079660 (trim23)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101079660 (trim23)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101079660 (trim23)
GTP-binding proteins [BR:
tru04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
101079660 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
G-alpha
SRPRB
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
101079660
NCBI-ProteinID:
XP_003965442
Ensembl:
ENSTRUG00000018393
UniProt:
H2VCX1
LinkDB
All DBs
Position
6:8292006..8296192
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AA seq
580 aa
AA seq
DB search
MAAAAAGINKQVAVAVMEPCIRHGRGANAHTVKVLECGVCEDVFSLQGDKVPRLLLCGHT
VCHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASNQSGMAD
DTLKGMGERIIRCDEDESHTASMYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHE
KTLCPQHQVHAIEFVCLEEACQSGALMCCVCKEYGKHQGHKHALLETEANQIRASILDMA
HCIRTFTDEVSEYSRKLVGIVQQIEGGEQIVEDGVGMAHTEHVPGTAESARSCVRAYFAD
LHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVV
LAKQEISCLLETLQKQQHQFTELADHIQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDG
AGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQA
VVFVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGVVSVEEMTELLSLHK
LCCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgcagctggaataaacaagcaggtcgctgtagctgtgatggagccctgt
atccgacacgggagaggagctaatgcccacacggttaaggtgttggagtgtggtgtctgc
gaggatgtcttctccctgcaaggggacaaggtcccccgtcttctgctgtgtggtcacacg
gtgtgccatgactgtctcacccggctgcccctccatggccgagcggtccgctgccccttc
gacagacaggtcactgagctgggggattctggagtttggggtttgaagaagaactttgcg
cttttagagcttcttgagcgactccaaaatggagcgagcaatcagtcaggaatggcagac
gacaccctgaaaggcatgggagagcgcatcattcgctgcgatgaggacgagagccacacg
gcctccatgtactgcaccgtgtgtgccactcacctgtgtgccgagtgctcccagctcacc
cactccacccgcacgctggccaagcaccgccgggtgccgctggcggacaagcctcacgag
aagaccctgtgcccgcagcaccaggtccacgccattgagtttgtgtgcctggaggaagcc
tgtcagtcgggggccctcatgtgctgcgtgtgtaaggagtacggcaaacatcaagggcat
aagcatgctcttctggaaaccgaagcaaaccagatccgcgcgtccatcctggacatggca
cactgcatccgcaccttcacagacgaggtgtcggagtactctcggaagttggtgggaatc
gttcagcagatagagggcggggagcagatagtggaggacggcgtcggcatggcgcacaca
gaacacgtccccggcacagcggagagcgcgcgctcctgcgtccgggcttacttcgcagac
ctccacgagacgctgtgtcggcaggaggagatggcgctgagcgtggtggacgcccacgtc
agggagaggctgatctggctgaggcagcagcaggaggacatgaccatcctgctgtctcag
gtgtccaccgcctgcctgcactgtgaaaaaacccttcaacaggacgactgcagagttgtg
ctggccaagcaggagatcagctgcttattggagacgctccagaagcagcagcaccagttc
acggagctggccgaccacattcagctggacgccggcatccccgtcaccttcaccaaggac
aaccgggtccacataggtccgaagatggagatccgcgttgtgactctgggtctggatgga
gccggaaaaaccaccatcctcttcaagctcaaacaggacgagttcatgcagccgatcccg
acgatcggctttaatgtggagacggtggaatacaagaacttaaagttcaccatctgggac
gtgggtggaaaacacaagctcaggcctctctggaaacactactacctgaacactcaagcg
gtggtgtttgtgatcgacagctgtcaccgggacagactcatggaggcccacagcgagctc
gccaaactactgacggagaaggagctgcgagacgcgctgctgctcatcttcgccaacaaa
caggatgtccccggcgtcgtgtcggtggaggagatgacggagctgctgagcctgcacaag
ctgtgctgcgggaggagctggcacatccagggctgcgacgcccgcagcgggatgggactc
cacgaggggctggactggctctcaaggcagctggtggcagcaggggtcctggatgtggcc
taa
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